RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PRRT1Q99946 306 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 RNASE7Q9H1E1 156 aaKnown RBP1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 NDUFA12Q9UI09 145 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 EPDR1Q9UM22 224 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 ALG5Q9Y673 324 aa1.28□□□□□ -2.2
TOPBP1-206ENST00000508524 TRAV13-1A0A0B4J241 112 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 C9orf170A2RU37 121 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 FAM25AB3EWG3 89 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 FAM25CB3EWG5 89 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 FAM25GB3EWG6 89 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 M0R378 163 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 NDUFS5O43920 106 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 UPK1BO75841 260 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 SULT1A1P50225 295 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 RPS29P62273 56 aaKnown RBP1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 KHDC3LQ587J8 217 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 Q6ZUT4 128 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 FAM19A2Q8N3H0 131 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 GATD1Q8NB37 220 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 OR10D4PQ8NGN7 298 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 CNBD2Q96M20 576 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 NIT2Q9NQR4 276 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 TP73-AS1Q9UF72 201 aa1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 LSM5Q9Y4Y9 91 aaKnown RBP1.27□□□□□ -2.21
TOPBP1-206ENST00000508524 HSBP1L1C9JCN9 74 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 GATCO43716 136 aaKnown RBP1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 ZNF25P17030 456 aaPredicted RBP1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 VBP1P61758 197 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 NEDD8Q15843 81 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 TMEM241Q24JQ0 296 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 SAPCD1Q5SSQ6 148 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 SPANXN1Q5VSR9 72 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 MRPL52Q86TS9 123 aaKnown RBP1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 AP1S3Q96PC3 154 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 WDR61Q9GZS3 305 aaKnown RBP1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 TMEM126AQ9H061 195 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 VCX3AQ9NNX9 186 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 TMEM242Q9NWH2 141 aa1.26□□□□□ -2.21
TOPBP1-206ENST00000508524 TRBV30A0A0K0K1B3 111 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 A0A1B0GXF2 115 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 C20orf202A1L168 122 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 ZNF727A8MUV8 499 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 C1orf196B1AJZ1 125 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 SMLR1H3BR10 107 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 IGLC6P0CF74 106 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 GCHFRP30047 84 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 S100A11P31949 105 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 SSBP1Q04837 148 aaKnown RBP1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 PMVKQ15126 192 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 FAM74A1Q5RGS3 127 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 LYZL1Q6UWQ5 148 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 AMN1Q8IY45 258 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 MCFD2Q8NI22 146 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 OBSCN-AS1Q96MR7 158 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 MED9Q9NWA0 146 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 RBM12B-AS1Q9P1G2 102 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 SCP2D1Q9UJQ7 156 aa1.25□□□□□ -2.21
TOPBP1-206ENST00000508524 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 ATP5HO75947 161 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 ERC2-IT1O76042 136 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 NCR2O95944 276 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 LTAP01374 205 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 SMIM17P0DL12 118 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 TAS2R45P59539 299 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 RPS20P60866 119 aaKnown RBP1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 BOD1L2Q8IYS8 172 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 AP3S1Q92572 193 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 FMC1Q96HJ9 113 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 SLC25A21Q9BQT8 299 aaPredicted RBP1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 PRO0628Q9UI54 55 aa1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 ZNF706Q9Y5V0 76 aaPredicted RBP1.24□□□□□ -2.21
TOPBP1-206ENST00000508524 A8MWP4 228 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 C9JQL5 133 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 INMT-MINDY4F8WBC2 141 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 CXCL1P09341 107 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 HBG1P69891 147 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 HBG2P69892 147 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 STX12Q86Y82 276 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 MRAP2Q96G30 205 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 BTF3L4Q96K17 158 aa1.23□□□□□ -2.21
TOPBP1-206ENST00000508524 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 PIGBOS1A0A0B4J2F0 54 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 LOC389332A0A1B0GUA5 103 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 MT4P47944 62 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 PSMB2P49721 201 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 RPL39P62891 51 aaKnown RBP1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 MRPS10P82664 201 aaKnown RBP1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 CD164Q04900 197 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 C1orf195Q5TG92 126 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 HRCT1Q6UXD1 115 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 SMCR5Q8TEV8 140 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 CCDC32Q9BV29 185 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 SMIM3Q9BZL3 60 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 ZFP30Q9Y2G7 519 aa1.22□□□□□ -2.21
TOPBP1-206ENST00000508524 C7orf77A4D0Y5 90 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 I3L3M4 83 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 NDUFB6O95139 128 aa1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 ZNF22P17026 224 aaPredicted RBP1.21□□□□□ -2.22
TOPBP1-206ENST00000508524 CDC34P49427 236 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms