RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 NKAPP1Q8N9T2 125 aa12.68□□□□□ -0.38
USP53-203ENST00000507597 TTTY13Q9BZ97 58 aa12.68□□□□□ -0.38
USP53-203ENST00000507597 COX8AP10176 69 aa12.66□□□□□ -0.38
USP53-203ENST00000507597 HAMPP81172 84 aa12.66□□□□□ -0.38
USP53-203ENST00000507597 TP73-AS1Q9UF72 201 aa12.66□□□□□ -0.38
USP53-203ENST00000507597 M0QXV9 152 aa12.65□□□□□ -0.38
USP53-203ENST00000507597 DLEU1O43261 78 aa12.65□□□□□ -0.38
USP53-203ENST00000507597 HERC2O95714 4834 aa12.65□□□□□ -0.38
USP53-203ENST00000507597 BOD1L2Q8IYS8 172 aa12.64□□□□□ -0.39
USP53-203ENST00000507597 C22orf24Q9Y442 160 aa12.64□□□□□ -0.39
USP53-203ENST00000507597 IGLV5-37A0A075B6J1 123 aa12.63□□□□□ -0.39
USP53-203ENST00000507597 LOC107984156A0A0G2JMH3 177 aa12.63□□□□□ -0.39
USP53-203ENST00000507597 FAM168BA1KXE4 195 aa12.63□□□□□ -0.39
USP53-203ENST00000507597 IFITM1P13164 125 aa12.63□□□□□ -0.39
USP53-203ENST00000507597 ARL17AQ8IVW1 177 aa12.63□□□□□ -0.39
USP53-203ENST00000507597 SPANXDQ9BXN6 97 aa12.63□□□□□ -0.39
USP53-203ENST00000507597 SPANXCQ9NY87 97 aa12.63□□□□□ -0.39
USP53-203ENST00000507597 SMR3BP02814 79 aaPredicted RBP12.62□□□□□ -0.39
USP53-203ENST00000507597 UBE2BP63146 152 aa12.62□□□□□ -0.39
USP53-203ENST00000507597 SLC25A34Q6PIV7 304 aa12.62□□□□□ -0.39
USP53-203ENST00000507597 DAND5Q8N907 189 aa12.62□□□□□ -0.39
USP53-203ENST00000507597 DNAH8Q96JB1 4490 aa12.61□□□□□ -0.39
USP53-203ENST00000507597 PLA2G1BP04054 148 aaKnown RBP12.61□□□□□ -0.39
USP53-203ENST00000507597 SRSF9Q13242 221 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP53-203ENST00000507597 SERTAD4-AS1Q5TG53 156 aa12.61□□□□□ -0.39
USP53-203ENST00000507597 MRPL55Q7Z7F7 128 aaKnown RBP12.61□□□□□ -0.39
USP53-203ENST00000507597 LINC00528Q8N1L1 170 aa12.61□□□□□ -0.39
USP53-203ENST00000507597 ADAMTSL4-AS1Q5T5F5 129 aa12.6□□□□□ -0.39
USP53-203ENST00000507597 PHF5AQ7RTV0 110 aaKnown RBP12.6□□□□□ -0.39
USP53-203ENST00000507597 NDUFC2O95298 119 aa12.59□□□□□ -0.39
USP53-203ENST00000507597 SMIM6P0DI80 62 aa12.59□□□□□ -0.39
USP53-203ENST00000507597 VPREB1P12018 145 aa12.59□□□□□ -0.39
USP53-203ENST00000507597 Q8N1X5 172 aa12.59□□□□□ -0.39
USP53-203ENST00000507597 C14orf144Q96I85 54 aa12.59□□□□□ -0.39
USP53-203ENST00000507597 LITAFQ99732 161 aa12.59□□□□□ -0.39
USP53-203ENST00000507597 PPDPFQ9H3Y8 114 aa12.59□□□□□ -0.39
USP53-203ENST00000507597 M0R378 163 aa12.58□□□□□ -0.4
USP53-203ENST00000507597 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
USP53-203ENST00000507597 SPANXB1Q9NS25 103 aaPredicted RBP12.58□□□□□ -0.4
USP53-203ENST00000507597 RPL37AP61513 92 aaKnown RBP12.56□□□□□ -0.4
USP53-203ENST00000507597 NPC2P61916 151 aa12.56□□□□□ -0.4
USP53-203ENST00000507597 TRBV10-2A0A0K0K1G8 114 aa12.55□□□□□ -0.4
USP53-203ENST00000507597 LINC00518Q8N0U6 118 aa12.55□□□□□ -0.4
USP53-203ENST00000507597 CBY1Q9Y3M2 126 aa12.55□□□□□ -0.4
USP53-203ENST00000507597 LOC105371267A0A1B0GV96 52 aa12.54□□□□□ -0.4
USP53-203ENST00000507597 KRTAP7-1Q8IUC3 87 aa12.54□□□□□ -0.4
USP53-203ENST00000507597 LINC00167Q96N53 147 aa12.54□□□□□ -0.4
USP53-203ENST00000507597 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
USP53-203ENST00000507597 APOBP04114 4563 aaKnown RBP12.53□□□□□ -0.4
USP53-203ENST00000507597 Q5VSD8 79 aa12.52□□□□□ -0.41
USP53-203ENST00000507597 HIST1H4GQ99525 98 aa12.52□□□□□ -0.41
USP53-203ENST00000507597 PCLOQ9Y6V0 5065 aa12.52□□□□□ -0.41
USP53-203ENST00000507597 S100A7L2Q5SY68 101 aa12.51□□□□□ -0.41
USP53-203ENST00000507597 MUSTN1Q8IVN3 82 aa12.51□□□□□ -0.41
USP53-203ENST00000507597 UQCR10Q9UDW1 63 aa12.51□□□□□ -0.41
USP53-203ENST00000507597 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
USP53-203ENST00000507597 NCR3O14931 201 aa12.5□□□□□ -0.41
USP53-203ENST00000507597 SOSTDC1Q6X4U4 206 aa12.5□□□□□ -0.41
USP53-203ENST00000507597 KIAA1109Q2LD37 5005 aa12.5□□□□□ -0.41
USP53-203ENST00000507597 PSORS1C2Q9UIG4 136 aa12.48□□□□□ -0.41
USP53-203ENST00000507597 IGLV1-50A0A075B6I6 118 aa12.47□□□□□ -0.41
USP53-203ENST00000507597 RPL37AP8A6NKH3 93 aa12.47□□□□□ -0.41
USP53-203ENST00000507597 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
USP53-203ENST00000507597 TAL2Q16559 108 aa12.47□□□□□ -0.41
USP53-203ENST00000507597 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
USP53-203ENST00000507597 RYR1P21817 5038 aa12.46□□□□□ -0.41
USP53-203ENST00000507597 IGKV2-28A0A075B6P5 120 aa12.46□□□□□ -0.41
USP53-203ENST00000507597 IGKV2D-28P01615 120 aa12.46□□□□□ -0.41
USP53-203ENST00000507597 DDTP30046 118 aa12.46□□□□□ -0.41
USP53-203ENST00000507597 Q8NDZ9 215 aa12.46□□□□□ -0.41
USP53-203ENST00000507597 OR13C6PQ8NH95 151 aa12.45□□□□□ -0.42
USP53-203ENST00000507597 TMEM126AQ9H061 195 aa12.45□□□□□ -0.42
USP53-203ENST00000507597 TRAV13-2A0A0B4J235 113 aa12.43□□□□□ -0.42
USP53-203ENST00000507597 PRYO14603 147 aa12.43□□□□□ -0.42
USP53-203ENST00000507597 EIF4EBP3O60516 100 aaPredicted RBP12.43□□□□□ -0.42
USP53-203ENST00000507597 REG3GQ6UW15 175 aa12.43□□□□□ -0.42
USP53-203ENST00000507597 TMEM238LA0A1B0GVL6 79 aa12.42□□□□□ -0.42
USP53-203ENST00000507597 A6NJY4 79 aa12.42□□□□□ -0.42
USP53-203ENST00000507597 C12orf57Q99622 126 aa12.42□□□□□ -0.42
USP53-203ENST00000507597 TRBV10-3A0A0K0K1G6 114 aa12.41□□□□□ -0.42
USP53-203ENST00000507597 C2orf91Q6ZV80 131 aa12.41□□□□□ -0.42
USP53-203ENST00000507597 HSPG2P98160 4391 aa12.41□□□□□ -0.42
USP53-203ENST00000507597 TSTD3H0UI37 97 aa12.4□□□□□ -0.42
USP53-203ENST00000507597 BCE1O60756 84 aa12.4□□□□□ -0.42
USP53-203ENST00000507597 HINT1P49773 126 aaPredicted RBP12.4□□□□□ -0.42
USP53-203ENST00000507597 HNRNPA3P51991 378 aaKnown RBP12.4□□□□□ -0.42
USP53-203ENST00000507597 KCNQ1DNQ9H478 68 aa12.4□□□□□ -0.42
USP53-203ENST00000507597 IGLV6-57P01721 117 aa12.39□□□□□ -0.43
USP53-203ENST00000507597 A4D1N5 150 aa12.38□□□□□ -0.43
USP53-203ENST00000507597 A6NDN8 102 aa12.38□□□□□ -0.43
USP53-203ENST00000507597 IGLV7-43P04211 117 aa12.38□□□□□ -0.43
USP53-203ENST00000507597 HSD52Q0P140 79 aa12.38□□□□□ -0.43
USP53-203ENST00000507597 CEND1Q8N111 149 aa12.38□□□□□ -0.43
USP53-203ENST00000507597 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
USP53-203ENST00000507597 UBE2AP49459 152 aa12.37□□□□□ -0.43
USP53-203ENST00000507597 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
USP53-203ENST00000507597 TRAV23DV6A0A075B6W5 121 aa12.36□□□□□ -0.43
USP53-203ENST00000507597 SPINK6Q6UWN8 80 aa12.36□□□□□ -0.43
USP53-203ENST00000507597 PRO1933Q9H354 126 aa12.36□□□□□ -0.43
USP53-203ENST00000507597 ETDCA0A1B0GVM5 59 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms