RNA–Protein interactions for RNA: ENST00000507223.1

HMGCLL1-207, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 3

Gene HMGCLL1, Length 512 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-207ENST00000507223 Q6ZRU5 148 aa2.26□□□□□ -2.05
HMGCLL1-207ENST00000507223 TMEM141Q96I45 108 aa2.26□□□□□ -2.05
HMGCLL1-207ENST00000507223 MAP1LC3AQ9H492 121 aa2.26□□□□□ -2.05
HMGCLL1-207ENST00000507223 MRPL35Q9NZE8 188 aaKnown RBP2.26□□□□□ -2.05
HMGCLL1-207ENST00000507223 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 A0A0J9YXV3 536 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 LINC01549A6NIU2 74 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 COX7A2LO14548 114 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 INAFM2P0DMQ5 153 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 PRR3P79522 188 aaKnown RBP2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 SYCNQ0VAF6 134 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 ORMDL2Q53FV1 153 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 ERASQ7Z444 233 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 SVBPQ8N300 66 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 C18orf32Q8TCD1 76 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 LINC00526Q96FQ7 95 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 TMEM101Q96IK0 257 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 CARD19Q96LW7 228 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 LINC00474Q9P2X8 69 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 C6orf48Q9UBA6 75 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 CYSLTR1Q9Y271 337 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 TNXBP22105 4242 aa2.25□□□□□ -2.05
HMGCLL1-207ENST00000507223 TGIF2-C20orf24A0A0A6YYL0 155 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 IGKV3OR2-268A0A0C4DH90 116 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 TRBV30A0A0K0K1B3 111 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 SNAPINO95295 136 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 OXTP01178 125 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 RAB5AP20339 215 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 PDZD11Q5EBL8 140 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 TEX43Q6ZNM6 134 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 C5orf38Q86SI9 138 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 Q8IZM0 81 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 CDKN2A-AS1Q9UH64 79 aa2.24□□□□□ -2.05
HMGCLL1-207ENST00000507223 LOC107984640A0A0U1RRK4 108 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 LOC389332A0A1B0GUA5 103 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 TINCRA0A1B0GVN0 87 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 A0A1W2PNN7 141 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 APOC3P02656 99 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 IGLC3P0DOY3 106 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 RPL37AP61513 92 aaKnown RBP2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 HERVK_113P63121 156 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 SPAG11BQ08648 103 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 ORAOV1Q8WV07 137 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 CST9LQ9H4G1 147 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 PKIGQ9Y2B9 76 aa2.23□□□□□ -2.05
HMGCLL1-207ENST00000507223 NDUFC2-KCTD14E9PQ53 114 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 NDUFA1O15239 70 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 LINC00614P0C842 121 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 S100PP25815 95 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 G0S2P27469 103 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 SEC11AP67812 179 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 PMVKQ15126 192 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 C9orf116Q5BN46 136 aaPredicted RBP2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 C2orf82Q6UX34 121 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 UNQ6190/PRO20217Q6UXQ8 127 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 CBLN2Q8IUK8 224 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 ZNF625Q96I27 306 aaPredicted RBP2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 LINC01600Q96MT4 127 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 CAMK2N2Q96S95 79 aa2.22□□□□□ -2.05
HMGCLL1-207ENST00000507223 IGKV2-24A0A0C4DH68 120 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 COLCA2A8K830 154 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 F8VRH5 84 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 KRTAP4-16G5E9R7 235 aaPredicted RBP2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 HBDP02042 147 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 ZNF22P17026 224 aaPredicted RBP2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 CXCL5P42830 114 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 FABP9Q0Z7S8 132 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 MAJINQ3KP22 176 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 SPINK6Q6UWN8 80 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 Q6ZN92 141 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 KRTAP13-1Q8IUC0 172 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 CHCHD1Q96BP2 118 aaKnown RBP2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 C2orf88Q9BSF0 95 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 VCX2Q9H322 139 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 TP73-AS1Q9UF72 201 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 PSORS1C2Q9UIG4 136 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 TRAPPC1Q9Y5R8 145 aa2.21□□□□□ -2.06
HMGCLL1-207ENST00000507223 TRAV12-1A0A0B4J245 112 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 C11orf86A6NJI1 115 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 PMCHL1Q16048 86 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 NDUFA5Q16718 116 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 SLC7A5P1Q8MH63 180 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 Q8N9L7 120 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 Q8NDZ9 215 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 SCGB3A1Q96QR1 104 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 LRP2P98164 4655 aa2.2□□□□□ -2.06
HMGCLL1-207ENST00000507223 LOC107984156A0A0G2JMH3 177 aa2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 TRGC2P03986 189 aa2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 RPL18AQ02543 176 aaKnown RBP2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 COA6Q5JTJ3 125 aaKnown RBP2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 PHF5AQ7RTV0 110 aaKnown RBP2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 ARL17AQ8IVW1 177 aa2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 C7orf33Q8WU49 177 aa2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 SMCO4Q9NRQ5 59 aa2.19□□□□□ -2.06
HMGCLL1-207ENST00000507223 TMEM223A0PJW6 202 aa2.18□□□□□ -2.06
HMGCLL1-207ENST00000507223 M0QXV9 152 aa2.18□□□□□ -2.06
HMGCLL1-207ENST00000507223 NUPR1O60356 82 aa2.18□□□□□ -2.06
HMGCLL1-207ENST00000507223 HIST1H2BKO60814 126 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms