RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 MT-ND6P03923 174 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 SCGB1C2P0DMR2 95 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 MP68P56378 58 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 COL5A1-AS1Q5SY13 56 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 Q8N8P6 123 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 MIEN1Q9BRT3 115 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 CHAC1Q9BUX1 264 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 KLK12Q9UKR0 248 aa3.19□□□□□ -1.9
CPNE4-207ENST00000506687 VPS13BQ7Z7G8 4022 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 FGF6P10767 208 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 ZNF25P17030 456 aaPredicted RBP3.18□□□□□ -1.9
CPNE4-207ENST00000506687 IFI27P40305 119 aaPredicted RBP3.18□□□□□ -1.9
CPNE4-207ENST00000506687 UBE2AP49459 152 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 BATFQ16520 125 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 ZC2HC1BQ5TFG8 222 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 LINC00269Q8N2A0 174 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 SMIM20Q8N5G0 67 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 TIMM21Q9BVV7 248 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 SNHG12Q9BXW3 62 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 PRO1933Q9H354 126 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 CDC42SE2Q9NRR3 84 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 UBE2D4Q9Y2X8 147 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 TRAPPC1Q9Y5R8 145 aa3.18□□□□□ -1.9
CPNE4-207ENST00000506687 A0A087WTM6 91 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 K7EMI3 77 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 ANGP03950 147 aaKnown RBP3.17□□□□□ -1.9
CPNE4-207ENST00000506687 RPL39P62891 51 aaKnown RBP3.17□□□□□ -1.9
CPNE4-207ENST00000506687 Q0VG73 95 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 WFDC2Q14508 124 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 MIAQ16674 131 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 FA2HQ7L5A8 372 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 UBE2WQ96B02 151 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 CAMK2N2Q96S95 79 aa3.17□□□□□ -1.9
CPNE4-207ENST00000506687 NXT2Q9NPJ8 142 aaKnown RBP3.17□□□□□ -1.9
CPNE4-207ENST00000506687 IGIPA6NJ69 53 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 UBE2L6O14933 153 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 FCER1GP30273 86 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 MRPS36P82909 103 aaKnown RBP3.16□□□□□ -1.9
CPNE4-207ENST00000506687 PMCHL1Q16048 86 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 Q6ZRU5 148 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 SPATA12Q7Z6I5 190 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 OR5A1Q8NGJ0 315 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 C18orf32Q8TCD1 76 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 VAMP8Q9BV40 100 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 UQCR10Q9UDW1 63 aa3.16□□□□□ -1.9
CPNE4-207ENST00000506687 A0A096LNJ9 63 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 LINC00959A0A1B0GUT2 108 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 HIGD2BQ4VC39 106 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 AMMECR1LQ6DCA0 310 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 OR13C6PQ8NH95 151 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 TYMSOSQ8TAI1 123 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 TOMM6Q96B49 74 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 RMI2Q96E14 147 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 AMELXQ99217 191 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 SPANXA1Q9NS26 97 aa3.15□□□□□ -1.91
CPNE4-207ENST00000506687 LRP2P98164 4655 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 IGLV10-54A0A075B6I4 117 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 IGLV1-50A0A075B6I6 118 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 IGKV2D-24A0A075B6R9 120 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 FAM236DA0A1B0GTK5 79 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 CCL25O15444 150 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 CRPP02741 224 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 FAM236CP0DP71 79 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 C9orf129Q5T035 196 aaKnown RBP3.14□□□□□ -1.91
CPNE4-207ENST00000506687 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 Q6ZUT4 128 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 Q8N814 137 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 SND1-IT1Q9HBX3 110 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 CRCT1Q9UGL9 99 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 SS18L2Q9UHA2 77 aa3.14□□□□□ -1.91
CPNE4-207ENST00000506687 PSCAO43653 123 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 NUPR1O60356 82 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
CPNE4-207ENST00000506687 HERVK_113P63121 156 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 RNASE13Q5GAN3 156 aaKnown RBP3.13□□□□□ -1.91
CPNE4-207ENST00000506687 BAGE3Q86Y29 109 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 TMEM141Q96I45 108 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 CYSLTR1Q9Y271 337 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
CPNE4-207ENST00000506687 FLG2Q5D862 2391 aaPredicted RBP3.13□□□□□ -1.91
CPNE4-207ENST00000506687 TRAV13-1A0A0B4J241 112 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 IGKV3OR2-268A0A0C4DH90 116 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 LINC01549A6NIU2 74 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 LECT2O14960 151 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 SMR3BP02814 79 aaPredicted RBP3.12□□□□□ -1.91
CPNE4-207ENST00000506687 IGLC3P0DOY3 106 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 UBE2D1P51668 147 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 COX6A2Q02221 97 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 SS18Q15532 418 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 C15orf56Q8N910 161 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 CHCHD1Q96BP2 118 aaKnown RBP3.12□□□□□ -1.91
CPNE4-207ENST00000506687 SCGB3A1Q96QR1 104 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 PMCHL2Q9BQD1 86 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
CPNE4-207ENST00000506687 GVQW2A0A096LPI5 108 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms