RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TRAV12-1A0A0B4J245 112 aa9.84□□□□□ -0.83
PDLIM7-215ENST00000506161 TRGC2P03986 189 aa9.84□□□□□ -0.83
PDLIM7-215ENST00000506161 SLC7A5P1Q8MH63 180 aa9.84□□□□□ -0.83
PDLIM7-215ENST00000506161 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
PDLIM7-215ENST00000506161 MUC2Q02817 5179 aa9.82□□□□□ -0.84
PDLIM7-215ENST00000506161 M0R378 163 aa9.82□□□□□ -0.84
PDLIM7-215ENST00000506161 RPL13AP40429 203 aaKnown RBP9.82□□□□□ -0.84
PDLIM7-215ENST00000506161 COX17Q14061 63 aa9.82□□□□□ -0.84
PDLIM7-215ENST00000506161 TSPAN13O95857 204 aa9.81□□□□□ -0.84
PDLIM7-215ENST00000506161 TSPEAR-AS2P59090 65 aa9.81□□□□□ -0.84
PDLIM7-215ENST00000506161 TMEM126AQ9H061 195 aa9.81□□□□□ -0.84
PDLIM7-215ENST00000506161 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
PDLIM7-215ENST00000506161 UBE2AP49459 152 aa9.8□□□□□ -0.84
PDLIM7-215ENST00000506161 H0Y8G0 127 aa9.79□□□□□ -0.84
PDLIM7-215ENST00000506161 HSBP1O75506 76 aa9.79□□□□□ -0.84
PDLIM7-215ENST00000506161 SERF1AO75920 110 aa9.79□□□□□ -0.84
PDLIM7-215ENST00000506161 LINC00158P58513 81 aa9.79□□□□□ -0.84
PDLIM7-215ENST00000506161 FAM19A1Q7Z5A9 133 aa9.78□□□□□ -0.84
PDLIM7-215ENST00000506161 FAT4Q6V0I7 4981 aa9.78□□□□□ -0.84
PDLIM7-215ENST00000506161 TYMSOSQ8TAI1 123 aa9.77□□□□□ -0.85
PDLIM7-215ENST00000506161 COLCA2A8K830 154 aa9.76□□□□□ -0.85
PDLIM7-215ENST00000506161 CRYGAP11844 174 aa9.76□□□□□ -0.85
PDLIM7-215ENST00000506161 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
PDLIM7-215ENST00000506161 PRR4Q16378 134 aa9.76□□□□□ -0.85
PDLIM7-215ENST00000506161 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
PDLIM7-215ENST00000506161 PMCHL2Q9BQD1 86 aa9.75□□□□□ -0.85
PDLIM7-215ENST00000506161 NCR3O14931 201 aa9.73□□□□□ -0.85
PDLIM7-215ENST00000506161 LEPROTL1O95214 131 aa9.73□□□□□ -0.85
PDLIM7-215ENST00000506161 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
PDLIM7-215ENST00000506161 C3orf22Q8N5N4 141 aa9.73□□□□□ -0.85
PDLIM7-215ENST00000506161 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
PDLIM7-215ENST00000506161 NDUFA12Q9UI09 145 aa9.73□□□□□ -0.85
PDLIM7-215ENST00000506161 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
PDLIM7-215ENST00000506161 DAND5Q8N907 189 aa9.72□□□□□ -0.85
PDLIM7-215ENST00000506161 FABP4P15090 132 aa9.71□□□□□ -0.86
PDLIM7-215ENST00000506161 BOD1L2Q8IYS8 172 aa9.71□□□□□ -0.86
PDLIM7-215ENST00000506161 RETNLBQ9BQ08 111 aa9.71□□□□□ -0.86
PDLIM7-215ENST00000506161 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
PDLIM7-215ENST00000506161 KRTAP4-16G5E9R7 235 aaPredicted RBP9.69□□□□□ -0.86
PDLIM7-215ENST00000506161 LCE2AQ5TA79 106 aaPredicted RBP9.69□□□□□ -0.86
PDLIM7-215ENST00000506161 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
PDLIM7-215ENST00000506161 LEPROTO15243 131 aa9.68□□□□□ -0.86
PDLIM7-215ENST00000506161 SPRR1AP35321 89 aa9.68□□□□□ -0.86
PDLIM7-215ENST00000506161 TRBV10-3A0A0K0K1G6 114 aa9.67□□□□□ -0.86
PDLIM7-215ENST00000506161 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
PDLIM7-215ENST00000506161 HERV-K104P63124 156 aa9.67□□□□□ -0.86
PDLIM7-215ENST00000506161 LINC00304Q8N9R0 145 aa9.67□□□□□ -0.86
PDLIM7-215ENST00000506161 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
PDLIM7-215ENST00000506161 SPRR4Q96PI1 79 aa9.66□□□□□ -0.86
PDLIM7-215ENST00000506161 PRYO14603 147 aa9.65□□□□□ -0.86
PDLIM7-215ENST00000506161 J3QQQ9 107 aa9.64□□□□□ -0.87
PDLIM7-215ENST00000506161 DPM2O94777 84 aa9.64□□□□□ -0.87
PDLIM7-215ENST00000506161 SOSTDC1Q6X4U4 206 aa9.64□□□□□ -0.87
PDLIM7-215ENST00000506161 KCNQ1DNQ9H478 68 aa9.64□□□□□ -0.87
PDLIM7-215ENST00000506161 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
PDLIM7-215ENST00000506161 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
PDLIM7-215ENST00000506161 ATP6V1G1O75348 118 aa9.63□□□□□ -0.87
PDLIM7-215ENST00000506161 IGKCP01834 107 aa9.63□□□□□ -0.87
PDLIM7-215ENST00000506161 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
PDLIM7-215ENST00000506161 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
PDLIM7-215ENST00000506161 HSPB8Q9UJY1 196 aa9.63□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BKO60814 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BJP06899 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BOP23527 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 PLNP26678 52 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BBP33778 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BDP58876 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BCP62807 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST2H2BEQ16778 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BHQ93079 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BNQ99877 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 HIST1H2BMQ99879 126 aa9.62□□□□□ -0.87
PDLIM7-215ENST00000506161 ERC2-IT1O76042 136 aa9.61□□□□□ -0.87
PDLIM7-215ENST00000506161 LINC00337Q8N6G1 96 aa9.61□□□□□ -0.87
PDLIM7-215ENST00000506161 NPC2P61916 151 aa9.6□□□□□ -0.87
PDLIM7-215ENST00000506161 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
PDLIM7-215ENST00000506161 B5MCH6 92 aa9.58□□□□□ -0.88
PDLIM7-215ENST00000506161 Q9BRP9 147 aa9.58□□□□□ -0.88
PDLIM7-215ENST00000506161 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
PDLIM7-215ENST00000506161 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
PDLIM7-215ENST00000506161 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
PDLIM7-215ENST00000506161 ETDCA0A1B0GVM5 59 aa9.56□□□□□ -0.88
PDLIM7-215ENST00000506161 LINC00587B1AMM8 73 aa9.56□□□□□ -0.88
PDLIM7-215ENST00000506161 E9PLD3 99 aa9.56□□□□□ -0.88
PDLIM7-215ENST00000506161 SYS1-DBNDD2H3BUS1 97 aa9.56□□□□□ -0.88
PDLIM7-215ENST00000506161 DDTP30046 118 aa9.56□□□□□ -0.88
PDLIM7-215ENST00000506161 HERVK_113P61574 105 aa9.56□□□□□ -0.88
PDLIM7-215ENST00000506161 NMUP48645 174 aa9.55□□□□□ -0.88
PDLIM7-215ENST00000506161 LITAFQ99732 161 aa9.55□□□□□ -0.88
PDLIM7-215ENST00000506161 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
PDLIM7-215ENST00000506161 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
PDLIM7-215ENST00000506161 IGLV6-57P01721 117 aa9.54□□□□□ -0.88
PDLIM7-215ENST00000506161 MUC17Q685J3 4493 aa9.53□□□□□ -0.88
PDLIM7-215ENST00000506161 LINC00483Q53H64 154 aa9.53□□□□□ -0.88
PDLIM7-215ENST00000506161 Q8NBF4 154 aa9.53□□□□□ -0.88
PDLIM7-215ENST00000506161 SPANXB1Q9NS25 103 aaPredicted RBP9.53□□□□□ -0.88
PDLIM7-215ENST00000506161 LINC01545Q5VT33 79 aa9.52□□□□□ -0.89
PDLIM7-215ENST00000506161 GAGE2AQ6NT46 116 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms