RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 TRIAP1O43715 76 aa5.33□□□□□ -1.56
COL4A5-208ENST00000505728 TCL1BO95988 128 aa5.33□□□□□ -1.56
COL4A5-208ENST00000505728 IGKV2D-28P01615 120 aa5.33□□□□□ -1.56
COL4A5-208ENST00000505728 HIGD2BQ4VC39 106 aa5.33□□□□□ -1.56
COL4A5-208ENST00000505728 C9orf116Q5BN46 136 aaPredicted RBP5.33□□□□□ -1.56
COL4A5-208ENST00000505728 LINC00526Q96FQ7 95 aa5.33□□□□□ -1.56
COL4A5-208ENST00000505728 C6orf48Q9UBA6 75 aa5.33□□□□□ -1.56
COL4A5-208ENST00000505728 H3BMG7 143 aa5.32□□□□□ -1.56
COL4A5-208ENST00000505728 RPL28P46779 137 aaKnown RBP5.32□□□□□ -1.56
COL4A5-208ENST00000505728 SMCPP49901 116 aaPredicted RBP5.32□□□□□ -1.56
COL4A5-208ENST00000505728 ATXN8Q156A1 80 aa5.32□□□□□ -1.56
COL4A5-208ENST00000505728 RNF151Q2KHN1 245 aa5.32□□□□□ -1.56
COL4A5-208ENST00000505728 Q6ZRU5 148 aa5.32□□□□□ -1.56
COL4A5-208ENST00000505728 SYCNQ0VAF6 134 aa5.31□□□□□ -1.56
COL4A5-208ENST00000505728 LINC00337Q8N6G1 96 aa5.31□□□□□ -1.56
COL4A5-208ENST00000505728 PRO0461Q9UI25 63 aa5.31□□□□□ -1.56
COL4A5-208ENST00000505728 DNAH10Q8IVF4 4471 aa5.31□□□□□ -1.56
COL4A5-208ENST00000505728 KMT2AQ03164 3969 aa5.31□□□□□ -1.56
COL4A5-208ENST00000505728 USP17L23D6RBM5 183 aa5.3□□□□□ -1.56
COL4A5-208ENST00000505728 TTC32Q5I0X7 151 aa5.3□□□□□ -1.56
COL4A5-208ENST00000505728 LCE2AQ5TA79 106 aaPredicted RBP5.3□□□□□ -1.56
COL4A5-208ENST00000505728 OR13C6PQ8NH95 151 aa5.3□□□□□ -1.56
COL4A5-208ENST00000505728 TRBV10-2A0A0K0K1G8 114 aa5.29□□□□□ -1.56
COL4A5-208ENST00000505728 H0YGX0 51 aa5.29□□□□□ -1.56
COL4A5-208ENST00000505728 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
COL4A5-208ENST00000505728 WFDC2Q14508 124 aa5.29□□□□□ -1.56
COL4A5-208ENST00000505728 LINC01600Q96MT4 127 aa5.29□□□□□ -1.56
COL4A5-208ENST00000505728 TMEM126AQ9H061 195 aa5.29□□□□□ -1.56
COL4A5-208ENST00000505728 NDUFC2-KCTD14E9PQ53 114 aa5.28□□□□□ -1.56
COL4A5-208ENST00000505728 M0QXV9 152 aa5.28□□□□□ -1.56
COL4A5-208ENST00000505728 LST1O00453 97 aa5.28□□□□□ -1.56
COL4A5-208ENST00000505728 LINC01620Q4KN68 170 aa5.28□□□□□ -1.56
COL4A5-208ENST00000505728 SMIM11BQ8TCY0 68 aa5.28□□□□□ -1.56
COL4A5-208ENST00000505728 CARD19Q96LW7 228 aa5.28□□□□□ -1.56
COL4A5-208ENST00000505728 NBDYA0A0U1RRE5 68 aa5.27□□□□□ -1.57
COL4A5-208ENST00000505728 TRACP01848 142 aa5.27□□□□□ -1.57
COL4A5-208ENST00000505728 C14orf177Q52M58 125 aa5.27□□□□□ -1.57
COL4A5-208ENST00000505728 KRTAP17-1Q9BYP8 105 aa5.27□□□□□ -1.57
COL4A5-208ENST00000505728 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
COL4A5-208ENST00000505728 VPS13DQ5THJ4 4388 aa5.27□□□□□ -1.57
COL4A5-208ENST00000505728 HERC2O95714 4834 aa5.27□□□□□ -1.57
COL4A5-208ENST00000505728 C9JAW5 83 aa5.26□□□□□ -1.57
COL4A5-208ENST00000505728 PSCAO43653 123 aa5.26□□□□□ -1.57
COL4A5-208ENST00000505728 SLC25A20O43772 301 aa5.26□□□□□ -1.57
COL4A5-208ENST00000505728 PRR3P79522 188 aaKnown RBP5.26□□□□□ -1.57
COL4A5-208ENST00000505728 S100A7L2Q5SY68 101 aa5.26□□□□□ -1.57
COL4A5-208ENST00000505728 CLEC2BQ92478 149 aa5.26□□□□□ -1.57
COL4A5-208ENST00000505728 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 H3BT86 120 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 NCR3O14931 201 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 SLPIP03973 132 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 VPREB1P12018 145 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 GAGE2EQ4V326 116 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 OCIAD2Q56VL3 154 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 Q8NDZ9 215 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 GAGE2DQ9UEU5 116 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 PLA2G2DQ9UNK4 145 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 CBY1Q9Y3M2 126 aa5.25□□□□□ -1.57
COL4A5-208ENST00000505728 A0A1B0GX51 115 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 K7ERU9 68 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 M0R378 163 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 IGLV6-57P01721 117 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 ETDBQ3ZM63 59 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 Q6ZRP5 223 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 MTURNQ8N3F0 131 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 ANKRD29Q8N6D5 301 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 LINC00476Q8WZB0 136 aa5.24□□□□□ -1.57
COL4A5-208ENST00000505728 DNAH6Q9C0G6 4158 aa5.23□□□□□ -1.57
COL4A5-208ENST00000505728 LOC107984640A0A0U1RRK4 108 aa5.23□□□□□ -1.57
COL4A5-208ENST00000505728 J3QR89 54 aa5.23□□□□□ -1.57
COL4A5-208ENST00000505728 CNBPP62633 177 aaKnown RBP5.23□□□□□ -1.57
COL4A5-208ENST00000505728 RPL18AQ02543 176 aaKnown RBP5.23□□□□□ -1.57
COL4A5-208ENST00000505728 TEN1Q86WV5 123 aa5.23□□□□□ -1.57
COL4A5-208ENST00000505728 J3QL48 77 aa5.22□□□□□ -1.57
COL4A5-208ENST00000505728 LECT2O14960 151 aa5.22□□□□□ -1.57
COL4A5-208ENST00000505728 SNCGO76070 127 aa5.22□□□□□ -1.57
COL4A5-208ENST00000505728 C9orf129Q5T035 196 aaKnown RBP5.22□□□□□ -1.57
COL4A5-208ENST00000505728 FAM218AQ96MZ4 157 aa5.22□□□□□ -1.57
COL4A5-208ENST00000505728 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
COL4A5-208ENST00000505728 LY6G6CO95867 125 aa5.21□□□□□ -1.58
COL4A5-208ENST00000505728 DNAL4O96015 105 aa5.21□□□□□ -1.58
COL4A5-208ENST00000505728 BAALC-AS2P0C853 105 aa5.21□□□□□ -1.58
COL4A5-208ENST00000505728 Q6ZRN7 208 aaPredicted RBP5.21□□□□□ -1.58
COL4A5-208ENST00000505728 PPDPFLQ8WWR9 84 aa5.21□□□□□ -1.58
COL4A5-208ENST00000505728 PKIGQ9Y2B9 76 aa5.21□□□□□ -1.58
COL4A5-208ENST00000505728 DNAH2Q9P225 4427 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 FAT2Q9NYQ8 4349 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 TRAV23DV6A0A075B6W5 121 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 TRBV7-6A0A0J9YX20 115 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 TRBV10-3A0A0K0K1G6 114 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 LRCOL1A6NCL2 159 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 GAGE2BQ13066 116 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 C6orf99Q4VX62 202 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
COL4A5-208ENST00000505728 PKHD1P08F94 4074 aa5.19□□□□□ -1.58
COL4A5-208ENST00000505728 A0A087WYN8 130 aa5.19□□□□□ -1.58
COL4A5-208ENST00000505728 LINC00575Q6W349 94 aa5.19□□□□□ -1.58
COL4A5-208ENST00000505728 Q6ZR54 194 aa5.19□□□□□ -1.58
COL4A5-208ENST00000505728 DIRC1Q969H9 104 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms