RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 RNASE13Q5GAN3 156 aaKnown RBP5.93□□□□□ -1.46
NEDD9-210ENST00000505589 IGLC3P0DOY3 106 aa5.92□□□□□ -1.46
NEDD9-210ENST00000505589 GAGE2EQ4V326 116 aa5.92□□□□□ -1.46
NEDD9-210ENST00000505589 ORAOV1Q8WV07 137 aa5.92□□□□□ -1.46
NEDD9-210ENST00000505589 GAGE2DQ9UEU5 116 aa5.92□□□□□ -1.46
NEDD9-210ENST00000505589 PAM16Q9Y3D7 125 aa5.92□□□□□ -1.46
NEDD9-210ENST00000505589 TRBV30A0A0K0K1B3 111 aa5.91□□□□□ -1.46
NEDD9-210ENST00000505589 C11orf86A6NJI1 115 aa5.91□□□□□ -1.46
NEDD9-210ENST00000505589 HSBP1L1C9JCN9 74 aa5.91□□□□□ -1.46
NEDD9-210ENST00000505589 M0QXV9 152 aa5.91□□□□□ -1.46
NEDD9-210ENST00000505589 CTAG1AP78358 180 aa5.91□□□□□ -1.46
NEDD9-210ENST00000505589 SPATA45Q537H7 98 aa5.91□□□□□ -1.46
NEDD9-210ENST00000505589 LBHQ53QV2 105 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-210ENST00000505589 FAM19A5Q7Z5A7 132 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-210ENST00000505589 TINCRA0A1B0GVN0 87 aa5.9□□□□□ -1.46
NEDD9-210ENST00000505589 TSPAN13O95857 204 aa5.9□□□□□ -1.46
NEDD9-210ENST00000505589 CRYGAP11844 174 aa5.9□□□□□ -1.46
NEDD9-210ENST00000505589 FAM19A3Q7Z5A8 133 aa5.9□□□□□ -1.46
NEDD9-210ENST00000505589 IGHV3OR16-9A0A0B4J2B5 98 aa5.89□□□□□ -1.47
NEDD9-210ENST00000505589 NDUFC2-KCTD14E9PQ53 114 aa5.89□□□□□ -1.47
NEDD9-210ENST00000505589 ANKRD39Q53RE8 183 aa5.89□□□□□ -1.47
NEDD9-210ENST00000505589 TYMSOSQ8TAI1 123 aa5.89□□□□□ -1.47
NEDD9-210ENST00000505589 CDIP1Q9H305 208 aa5.89□□□□□ -1.47
NEDD9-210ENST00000505589 IGLV5-45A0A087WSX0 123 aa5.88□□□□□ -1.47
NEDD9-210ENST00000505589 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
NEDD9-210ENST00000505589 TSTD3H0UI37 97 aa5.88□□□□□ -1.47
NEDD9-210ENST00000505589 ZNF22P17026 224 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-210ENST00000505589 RPL28P46779 137 aaKnown RBP5.88□□□□□ -1.47
NEDD9-210ENST00000505589 HERVK_113P63121 156 aa5.88□□□□□ -1.47
NEDD9-210ENST00000505589 SEC11AP67812 179 aa5.88□□□□□ -1.47
NEDD9-210ENST00000505589 LINC00242Q5T6M2 205 aa5.88□□□□□ -1.47
NEDD9-210ENST00000505589 GEMIN7Q9H840 131 aaKnown RBP5.88□□□□□ -1.47
NEDD9-210ENST00000505589 HERVK_113P61574 105 aa5.87□□□□□ -1.47
NEDD9-210ENST00000505589 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
NEDD9-210ENST00000505589 UNQ6190/PRO20217Q6UXQ8 127 aa5.87□□□□□ -1.47
NEDD9-210ENST00000505589 LINC00469Q8N7U9 141 aa5.87□□□□□ -1.47
NEDD9-210ENST00000505589 PRO1933Q9H354 126 aa5.87□□□□□ -1.47
NEDD9-210ENST00000505589 C6orf48Q9UBA6 75 aa5.87□□□□□ -1.47
NEDD9-210ENST00000505589 TMEM223A0PJW6 202 aa5.86□□□□□ -1.47
NEDD9-210ENST00000505589 E9PLD3 99 aa5.86□□□□□ -1.47
NEDD9-210ENST00000505589 H3BRM9 83 aa5.86□□□□□ -1.47
NEDD9-210ENST00000505589 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
NEDD9-210ENST00000505589 IGKV2D-26A0A0A0MRZ7 120 aa5.85□□□□□ -1.47
NEDD9-210ENST00000505589 NMUP48645 174 aa5.85□□□□□ -1.47
NEDD9-210ENST00000505589 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
NEDD9-210ENST00000505589 KRTAP11-1Q8IUC1 163 aa5.85□□□□□ -1.47
NEDD9-210ENST00000505589 CDKN2A-AS1Q9UH64 79 aa5.85□□□□□ -1.47
NEDD9-210ENST00000505589 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
NEDD9-210ENST00000505589 PRSS2P07478 247 aa5.84□□□□□ -1.47
NEDD9-210ENST00000505589 COX8AP10176 69 aa5.84□□□□□ -1.47
NEDD9-210ENST00000505589 C10orf25Q5T742 122 aa5.84□□□□□ -1.47
NEDD9-210ENST00000505589 C14orf144Q96I85 54 aa5.84□□□□□ -1.47
NEDD9-210ENST00000505589 UQCR10Q9UDW1 63 aa5.84□□□□□ -1.47
NEDD9-210ENST00000505589 C22orf24Q9Y442 160 aa5.84□□□□□ -1.47
NEDD9-210ENST00000505589 MUC17Q685J3 4493 aa5.84□□□□□ -1.48
NEDD9-210ENST00000505589 IGLV5-39A0A0G2JS06 123 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 SMIM1B2RUZ4 78 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 LEPROTO15243 131 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 DLEU1O43261 78 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 SPINK8P0C7L1 97 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 CKS1BP61024 79 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 SLC25A34Q6PIV7 304 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 PCP2Q8IVA1 136 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 MIEN1Q9BRT3 115 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 TP73-AS1Q9UF72 201 aa5.83□□□□□ -1.48
NEDD9-210ENST00000505589 J3QQQ9 107 aa5.82□□□□□ -1.48
NEDD9-210ENST00000505589 DDTP30046 118 aa5.82□□□□□ -1.48
NEDD9-210ENST00000505589 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
NEDD9-210ENST00000505589 KIAA0087Q14695 138 aa5.82□□□□□ -1.48
NEDD9-210ENST00000505589 C6orf226Q5I0X4 101 aa5.82□□□□□ -1.48
NEDD9-210ENST00000505589 C9orf129Q5T035 196 aaKnown RBP5.82□□□□□ -1.48
NEDD9-210ENST00000505589 BOD1L2Q8IYS8 172 aa5.82□□□□□ -1.48
NEDD9-210ENST00000505589 IGLV7-46A0A075B6I9 117 aa5.81□□□□□ -1.48
NEDD9-210ENST00000505589 PCP4L1A6NKN8 68 aa5.81□□□□□ -1.48
NEDD9-210ENST00000505589 BCE1O60756 84 aa5.81□□□□□ -1.48
NEDD9-210ENST00000505589 LGALS3P17931 250 aaKnown RBP5.81□□□□□ -1.48
NEDD9-210ENST00000505589 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
NEDD9-210ENST00000505589 KRTAP7-1Q8IUC3 87 aa5.81□□□□□ -1.48
NEDD9-210ENST00000505589 A0A087X002 238 aa5.8□□□□□ -1.48
NEDD9-210ENST00000505589 MYMXA0A1B0GTQ4 84 aa5.8□□□□□ -1.48
NEDD9-210ENST00000505589 LINC01547P58512 204 aaPredicted RBP5.8□□□□□ -1.48
NEDD9-210ENST00000505589 MRPL55Q7Z7F7 128 aaKnown RBP5.8□□□□□ -1.48
NEDD9-210ENST00000505589 LINC00304Q8N9R0 145 aa5.8□□□□□ -1.48
NEDD9-210ENST00000505589 TTTY13Q9BZ97 58 aa5.8□□□□□ -1.48
NEDD9-210ENST00000505589 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
NEDD9-210ENST00000505589 C2orf91Q6ZV80 131 aa5.79□□□□□ -1.48
NEDD9-210ENST00000505589 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
NEDD9-210ENST00000505589 SPAG11AQ6PDA7 123 aa5.78□□□□□ -1.48
NEDD9-210ENST00000505589 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
NEDD9-210ENST00000505589 Q8IZM0 81 aa5.78□□□□□ -1.48
NEDD9-210ENST00000505589 LINC00337Q8N6G1 96 aa5.78□□□□□ -1.48
NEDD9-210ENST00000505589 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
NEDD9-210ENST00000505589 HIGD1BQ9P298 99 aa5.78□□□□□ -1.48
NEDD9-210ENST00000505589 CXCL5P42830 114 aa5.77□□□□□ -1.49
NEDD9-210ENST00000505589 UBE2AP49459 152 aa5.77□□□□□ -1.49
NEDD9-210ENST00000505589 TOMM7Q9P0U1 55 aa5.77□□□□□ -1.49
NEDD9-210ENST00000505589 NDUFA12Q9UI09 145 aa5.77□□□□□ -1.49
NEDD9-210ENST00000505589 LINC00587B1AMM8 73 aa5.76□□□□□ -1.49
NEDD9-210ENST00000505589 SFTA2Q6UW10 78 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms