RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TMEM170BQ5T4T1 132 aa7.64□□□□□ -1.19
DDX41-204ENST00000504807 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
DDX41-204ENST00000504807 TMEM223A0PJW6 202 aa7.63□□□□□ -1.19
DDX41-204ENST00000504807 CRYGAP11844 174 aa7.63□□□□□ -1.19
DDX41-204ENST00000504807 UBE2AP49459 152 aa7.63□□□□□ -1.19
DDX41-204ENST00000504807 A0A0U1RRA0 63 aa7.62□□□□□ -1.19
DDX41-204ENST00000504807 LINC00310P59036 64 aa7.62□□□□□ -1.19
DDX41-204ENST00000504807 CBLN2Q8IUK8 224 aa7.62□□□□□ -1.19
DDX41-204ENST00000504807 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
DDX41-204ENST00000504807 CHTOPQ9Y3Y2 248 aaKnown RBP7.62□□□□□ -1.19
DDX41-204ENST00000504807 MUC17Q685J3 4493 aa7.62□□□□□ -1.19
DDX41-204ENST00000504807 FAM19A1Q7Z5A9 133 aa7.61□□□□□ -1.19
DDX41-204ENST00000504807 SNAPINO95295 136 aa7.6□□□□□ -1.19
DDX41-204ENST00000504807 COX17Q14061 63 aa7.6□□□□□ -1.19
DDX41-204ENST00000504807 SVBPQ8N300 66 aa7.6□□□□□ -1.19
DDX41-204ENST00000504807 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
DDX41-204ENST00000504807 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
DDX41-204ENST00000504807 TRAV12-1A0A0B4J245 112 aa7.59□□□□□ -1.19
DDX41-204ENST00000504807 IFI27L1Q96BM0 104 aa7.59□□□□□ -1.19
DDX41-204ENST00000504807 PLEKHB2Q96CS7 222 aa7.59□□□□□ -1.19
DDX41-204ENST00000504807 SMIM13P0DJ93 91 aa7.58□□□□□ -1.2
DDX41-204ENST00000504807 TSPEAR-AS2P59090 65 aa7.58□□□□□ -1.2
DDX41-204ENST00000504807 FAM229BQ4G0N7 80 aa7.58□□□□□ -1.2
DDX41-204ENST00000504807 CHCHD1Q96BP2 118 aaKnown RBP7.58□□□□□ -1.2
DDX41-204ENST00000504807 KRTAP9-7A8MTY7 169 aa7.57□□□□□ -1.2
DDX41-204ENST00000504807 LINC00158P58513 81 aa7.57□□□□□ -1.2
DDX41-204ENST00000504807 RPL24P83731 157 aaKnown RBP7.56□□□□□ -1.2
DDX41-204ENST00000504807 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
DDX41-204ENST00000504807 NCR3O14931 201 aa7.55□□□□□ -1.2
DDX41-204ENST00000504807 KRTAP4-16G5E9R7 235 aaPredicted RBP7.54□□□□□ -1.2
DDX41-204ENST00000504807 TRGC2P03986 189 aa7.54□□□□□ -1.2
DDX41-204ENST00000504807 NDUFA5Q16718 116 aa7.54□□□□□ -1.2
DDX41-204ENST00000504807 MIR7-3HGQ8N6C7 128 aa7.54□□□□□ -1.2
DDX41-204ENST00000504807 HIGD2AQ9BW72 106 aa7.54□□□□□ -1.2
DDX41-204ENST00000504807 H0Y8G0 127 aa7.53□□□□□ -1.2
DDX41-204ENST00000504807 SPRR4Q96PI1 79 aa7.53□□□□□ -1.2
DDX41-204ENST00000504807 IGKV2D-26A0A0A0MRZ7 120 aa7.52□□□□□ -1.21
DDX41-204ENST00000504807 SERF1AO75920 110 aa7.52□□□□□ -1.21
DDX41-204ENST00000504807 SPRR1AP35321 89 aa7.52□□□□□ -1.21
DDX41-204ENST00000504807 LINC01547P58512 204 aaPredicted RBP7.52□□□□□ -1.21
DDX41-204ENST00000504807 SFTA2Q6UW10 78 aa7.52□□□□□ -1.21
DDX41-204ENST00000504807 BOD1L2Q8IYS8 172 aa7.52□□□□□ -1.21
DDX41-204ENST00000504807 DAND5Q8N907 189 aa7.52□□□□□ -1.21
DDX41-204ENST00000504807 HSBP1O75506 76 aa7.51□□□□□ -1.21
DDX41-204ENST00000504807 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
DDX41-204ENST00000504807 PMCHL2Q9BQD1 86 aa7.51□□□□□ -1.21
DDX41-204ENST00000504807 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
DDX41-204ENST00000504807 TRBV10-3A0A0K0K1G6 114 aa7.5□□□□□ -1.21
DDX41-204ENST00000504807 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
DDX41-204ENST00000504807 MEIG1Q5JSS6 88 aa7.5□□□□□ -1.21
DDX41-204ENST00000504807 SLC7A5P1Q8MH63 180 aa7.5□□□□□ -1.21
DDX41-204ENST00000504807 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
DDX41-204ENST00000504807 KCNQ1DNQ9H478 68 aa7.49□□□□□ -1.21
DDX41-204ENST00000504807 PRYO14603 147 aa7.48□□□□□ -1.21
DDX41-204ENST00000504807 PPDPFQ9H3Y8 114 aa7.48□□□□□ -1.21
DDX41-204ENST00000504807 COLCA2A8K830 154 aa7.47□□□□□ -1.21
DDX41-204ENST00000504807 LEPROTO15243 131 aa7.47□□□□□ -1.21
DDX41-204ENST00000504807 HERV-K104P63124 156 aa7.47□□□□□ -1.21
DDX41-204ENST00000504807 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
DDX41-204ENST00000504807 IGLV7-46A0A075B6I9 117 aa7.46□□□□□ -1.22
DDX41-204ENST00000504807 LEPROTL1O95214 131 aa7.46□□□□□ -1.22
DDX41-204ENST00000504807 FABP4P15090 132 aa7.46□□□□□ -1.22
DDX41-204ENST00000504807 TPRXLQ17RH7 258 aa7.46□□□□□ -1.22
DDX41-204ENST00000504807 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
DDX41-204ENST00000504807 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
DDX41-204ENST00000504807 MYMXA0A1B0GTQ4 84 aa7.45□□□□□ -1.22
DDX41-204ENST00000504807 B5MCH6 92 aa7.45□□□□□ -1.22
DDX41-204ENST00000504807 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
DDX41-204ENST00000504807 Q8NBF4 154 aa7.45□□□□□ -1.22
DDX41-204ENST00000504807 Q9BRP9 147 aa7.45□□□□□ -1.22
DDX41-204ENST00000504807 CDIP1Q9H305 208 aa7.45□□□□□ -1.22
DDX41-204ENST00000504807 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
DDX41-204ENST00000504807 J3QQQ9 107 aa7.44□□□□□ -1.22
DDX41-204ENST00000504807 ATP6V1G1O75348 118 aa7.43□□□□□ -1.22
DDX41-204ENST00000504807 LINC00483Q53H64 154 aa7.43□□□□□ -1.22
DDX41-204ENST00000504807 ADAMTSL4-AS1Q5T5F5 129 aa7.43□□□□□ -1.22
DDX41-204ENST00000504807 ETDCA0A1B0GVM5 59 aa7.42□□□□□ -1.22
DDX41-204ENST00000504807 DPM2O94777 84 aa7.42□□□□□ -1.22
DDX41-204ENST00000504807 PLNP26678 52 aa7.42□□□□□ -1.22
DDX41-204ENST00000504807 IGKCP01834 107 aa7.41□□□□□ -1.22
DDX41-204ENST00000504807 DDTP30046 118 aa7.41□□□□□ -1.22
DDX41-204ENST00000504807 NPC2P61916 151 aa7.41□□□□□ -1.22
DDX41-204ENST00000504807 GAGE2AQ6NT46 116 aa7.4□□□□□ -1.22
DDX41-204ENST00000504807 ZNF706Q9Y5V0 76 aaPredicted RBP7.4□□□□□ -1.22
DDX41-204ENST00000504807 A0A0J9YXY3 114 aa7.39□□□□□ -1.23
DDX41-204ENST00000504807 IGLV6-57P01721 117 aa7.39□□□□□ -1.23
DDX41-204ENST00000504807 CTAG1AP78358 180 aa7.39□□□□□ -1.23
DDX41-204ENST00000504807 KRTAP13-3Q3SY46 172 aa7.39□□□□□ -1.23
DDX41-204ENST00000504807 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
DDX41-204ENST00000504807 TRBV10-2A0A0K0K1G8 114 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 LINC00587B1AMM8 73 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 MOBPQ13875 183 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 SPAG11AQ6PDA7 123 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 Q6ZRX8 168 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 LITAFQ99732 161 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
DDX41-204ENST00000504807 IGLV9-49A0A0B4J1Y8 123 aa7.37□□□□□ -1.23
DDX41-204ENST00000504807 LGALS3P17931 250 aaKnown RBP7.37□□□□□ -1.23
DDX41-204ENST00000504807 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms