RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
NEDD9-209ENST00000504634 SLC7A5P1Q8MH63 180 aa6.9□□□□□ -1.3
NEDD9-209ENST00000504634 NDUFA6P56556 154 aa6.88□□□□□ -1.31
NEDD9-209ENST00000504634 COX17Q14061 63 aa6.88□□□□□ -1.31
NEDD9-209ENST00000504634 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
NEDD9-209ENST00000504634 SVBPQ8N300 66 aa6.88□□□□□ -1.31
NEDD9-209ENST00000504634 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-209ENST00000504634 SMCO4Q9NRQ5 59 aa6.88□□□□□ -1.31
NEDD9-209ENST00000504634 ZNF706Q9Y5V0 76 aaPredicted RBP6.88□□□□□ -1.31
NEDD9-209ENST00000504634 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
NEDD9-209ENST00000504634 ASB16-AS1Q495Z4 193 aa6.87□□□□□ -1.31
NEDD9-209ENST00000504634 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
NEDD9-209ENST00000504634 SNAPINO95295 136 aa6.86□□□□□ -1.31
NEDD9-209ENST00000504634 IGLC3P0DOY3 106 aa6.86□□□□□ -1.31
NEDD9-209ENST00000504634 SEC61BP60468 96 aaKnown RBP6.86□□□□□ -1.31
NEDD9-209ENST00000504634 KRTAP13-3Q3SY46 172 aa6.86□□□□□ -1.31
NEDD9-209ENST00000504634 DAND5Q8N907 189 aa6.86□□□□□ -1.31
NEDD9-209ENST00000504634 Q8NBF4 154 aa6.86□□□□□ -1.31
NEDD9-209ENST00000504634 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
NEDD9-209ENST00000504634 Q8NDZ9 215 aa6.85□□□□□ -1.31
NEDD9-209ENST00000504634 ZNF22P17026 224 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-209ENST00000504634 LINC00158P58513 81 aa6.84□□□□□ -1.31
NEDD9-209ENST00000504634 RHEBQ15382 184 aa6.84□□□□□ -1.31
NEDD9-209ENST00000504634 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
NEDD9-209ENST00000504634 TRAV9-1A0A075B6T8 112 aa6.83□□□□□ -1.32
NEDD9-209ENST00000504634 SPINK1P00995 79 aa6.83□□□□□ -1.32
NEDD9-209ENST00000504634 NDUFA12Q9UI09 145 aa6.83□□□□□ -1.32
NEDD9-209ENST00000504634 APOC3P02656 99 aa6.82□□□□□ -1.32
NEDD9-209ENST00000504634 S100PP25815 95 aa6.82□□□□□ -1.32
NEDD9-209ENST00000504634 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
NEDD9-209ENST00000504634 A0A0U1RRA0 63 aa6.81□□□□□ -1.32
NEDD9-209ENST00000504634 FABP9Q0Z7S8 132 aa6.81□□□□□ -1.32
NEDD9-209ENST00000504634 ETDCA0A1B0GVM5 59 aa6.8□□□□□ -1.32
NEDD9-209ENST00000504634 PRYO14603 147 aa6.8□□□□□ -1.32
NEDD9-209ENST00000504634 SMCR5Q8TEV8 140 aa6.8□□□□□ -1.32
NEDD9-209ENST00000504634 C11orf86A6NJI1 115 aa6.79□□□□□ -1.32
NEDD9-209ENST00000504634 COX19Q49B96 90 aa6.79□□□□□ -1.32
NEDD9-209ENST00000504634 BAGE3Q86Y29 109 aa6.79□□□□□ -1.32
NEDD9-209ENST00000504634 FAM19A2Q8N3H0 131 aa6.79□□□□□ -1.32
NEDD9-209ENST00000504634 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
NEDD9-209ENST00000504634 HBDP02042 147 aa6.78□□□□□ -1.32
NEDD9-209ENST00000504634 GAGE2AQ6NT46 116 aa6.78□□□□□ -1.32
NEDD9-209ENST00000504634 BOD1L2Q8IYS8 172 aa6.78□□□□□ -1.32
NEDD9-209ENST00000504634 IGLV9-49A0A0B4J1Y8 123 aa6.77□□□□□ -1.33
NEDD9-209ENST00000504634 NCR3O14931 201 aa6.77□□□□□ -1.33
NEDD9-209ENST00000504634 S100A12P80511 92 aa6.77□□□□□ -1.33
NEDD9-209ENST00000504634 A0A096LNJ9 63 aa6.76□□□□□ -1.33
NEDD9-209ENST00000504634 LINC00614P0C842 121 aa6.76□□□□□ -1.33
NEDD9-209ENST00000504634 MOBPQ13875 183 aa6.76□□□□□ -1.33
NEDD9-209ENST00000504634 LINC00483Q53H64 154 aa6.76□□□□□ -1.33
NEDD9-209ENST00000504634 MEIG1Q5JSS6 88 aa6.76□□□□□ -1.33
NEDD9-209ENST00000504634 KCNQ1DNQ9H478 68 aa6.76□□□□□ -1.33
NEDD9-209ENST00000504634 SLC25A20O43772 301 aa6.75□□□□□ -1.33
NEDD9-209ENST00000504634 SMIM13P0DJ93 91 aa6.75□□□□□ -1.33
NEDD9-209ENST00000504634 SPRR1AP35321 89 aa6.75□□□□□ -1.33
NEDD9-209ENST00000504634 PMCHL1Q16048 86 aa6.75□□□□□ -1.33
NEDD9-209ENST00000504634 TRBV10-3A0A0K0K1G6 114 aa6.74□□□□□ -1.33
NEDD9-209ENST00000504634 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
NEDD9-209ENST00000504634 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
NEDD9-209ENST00000504634 Q8N377 158 aa6.74□□□□□ -1.33
NEDD9-209ENST00000504634 RPS10P5Q9NQ39 176 aa6.74□□□□□ -1.33
NEDD9-209ENST00000504634 CHTOPQ9Y3Y2 248 aaKnown RBP6.74□□□□□ -1.33
NEDD9-209ENST00000504634 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
NEDD9-209ENST00000504634 TMEM223A0PJW6 202 aa6.72□□□□□ -1.33
NEDD9-209ENST00000504634 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-209ENST00000504634 XP32Q5T750 250 aa6.72□□□□□ -1.33
NEDD9-209ENST00000504634 C18orf32Q8TCD1 76 aa6.72□□□□□ -1.33
NEDD9-209ENST00000504634 URB1-AS1Q96HZ7 61 aa6.72□□□□□ -1.33
NEDD9-209ENST00000504634 LINC00587B1AMM8 73 aa6.71□□□□□ -1.34
NEDD9-209ENST00000504634 B5MCH6 92 aa6.71□□□□□ -1.34
NEDD9-209ENST00000504634 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.34
NEDD9-209ENST00000504634 ERC2-IT1O76042 136 aa6.7□□□□□ -1.34
NEDD9-209ENST00000504634 HERV-K104P63124 156 aa6.7□□□□□ -1.34
NEDD9-209ENST00000504634 MAP1LC3CQ9BXW4 147 aa6.7□□□□□ -1.34
NEDD9-209ENST00000504634 C9orf153Q5TBE3 101 aa6.69□□□□□ -1.34
NEDD9-209ENST00000504634 DDTP30046 118 aa6.68□□□□□ -1.34
NEDD9-209ENST00000504634 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
NEDD9-209ENST00000504634 MYMXA0A1B0GTQ4 84 aa6.67□□□□□ -1.34
NEDD9-209ENST00000504634 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
NEDD9-209ENST00000504634 Q6ZRX8 168 aa6.66□□□□□ -1.34
NEDD9-209ENST00000504634 IFI27L1Q96BM0 104 aa6.66□□□□□ -1.34
NEDD9-209ENST00000504634 YPEL4Q96NS1 127 aa6.66□□□□□ -1.34
NEDD9-209ENST00000504634 Q9BRP9 147 aa6.66□□□□□ -1.34
NEDD9-209ENST00000504634 COLCA2A8K830 154 aa6.65□□□□□ -1.34
NEDD9-209ENST00000504634 CFC1BP0CG36 223 aa6.65□□□□□ -1.34
NEDD9-209ENST00000504634 JOSD1Q15040 202 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-209ENST00000504634 PCOTHQ58A44 107 aa6.65□□□□□ -1.34
NEDD9-209ENST00000504634 IGLV8-61A0A075B6I0 122 aa6.64□□□□□ -1.35
NEDD9-209ENST00000504634 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
NEDD9-209ENST00000504634 MT1HP80294 61 aa6.64□□□□□ -1.35
NEDD9-209ENST00000504634 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
NEDD9-209ENST00000504634 MIEN1Q9BRT3 115 aa6.64□□□□□ -1.35
NEDD9-209ENST00000504634 SPANXB1Q9NS25 103 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-209ENST00000504634 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
NEDD9-209ENST00000504634 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
NEDD9-209ENST00000504634 LIMD2Q9BT23 127 aa6.62□□□□□ -1.35
NEDD9-209ENST00000504634 TRAV23DV6A0A075B6W5 121 aa6.61□□□□□ -1.35
NEDD9-209ENST00000504634 C9orf92A6NGG3 77 aa6.61□□□□□ -1.35
NEDD9-209ENST00000504634 H0Y8G0 127 aa6.61□□□□□ -1.35
NEDD9-209ENST00000504634 LOC107984156A0A0G2JMH3 177 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms