RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 Q6ZQY7 126 aa5.27□□□□□ -1.57
NEDD9-208ENST00000504387 TM2D3Q9BRN9 247 aa5.27□□□□□ -1.57
NEDD9-208ENST00000504387 TRBV10-1A0A0K0K1A3 114 aa5.27□□□□□ -1.57
NEDD9-208ENST00000504387 ANGP03950 147 aaKnown RBP5.27□□□□□ -1.57
NEDD9-208ENST00000504387 A0A087WZ39 114 aa5.26□□□□□ -1.57
NEDD9-208ENST00000504387 H7BZZ5 65 aa5.26□□□□□ -1.57
NEDD9-208ENST00000504387 SMR3AQ99954 134 aa5.26□□□□□ -1.57
NEDD9-208ENST00000504387 PDZD2O15018 2839 aa5.26□□□□□ -1.57
NEDD9-208ENST00000504387 LINC01547P58512 204 aaPredicted RBP5.26□□□□□ -1.57
NEDD9-208ENST00000504387 LINC00482Q8N8I6 264 aa5.26□□□□□ -1.57
NEDD9-208ENST00000504387 OBSCN-AS1Q96MR7 158 aa5.26□□□□□ -1.57
NEDD9-208ENST00000504387 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
NEDD9-208ENST00000504387 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
NEDD9-208ENST00000504387 LYPD5Q6UWN5 251 aa5.25□□□□□ -1.57
NEDD9-208ENST00000504387 FLNBO75369 2602 aaKnown RBP5.25□□□□□ -1.57
NEDD9-208ENST00000504387 VWFP04275 2813 aa5.25□□□□□ -1.57
NEDD9-208ENST00000504387 UNQ6190/PRO20217Q6UXQ8 127 aa5.25□□□□□ -1.57
NEDD9-208ENST00000504387 Q6ZVQ6 151 aa5.25□□□□□ -1.57
NEDD9-208ENST00000504387 IGHV4-28A0A0C4DH34 117 aa5.25□□□□□ -1.57
NEDD9-208ENST00000504387 TEP1Q99973 2627 aaKnown RBP5.25□□□□□ -1.57
NEDD9-208ENST00000504387 NDUFC2O95298 119 aa5.24□□□□□ -1.57
NEDD9-208ENST00000504387 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
NEDD9-208ENST00000504387 GIG44P09565 113 aaPredicted RBP5.23□□□□□ -1.57
NEDD9-208ENST00000504387 DEFB105AQ8NG35 78 aa5.23□□□□□ -1.57
NEDD9-208ENST00000504387 DEFB135Q30KP9 77 aa5.23□□□□□ -1.57
NEDD9-208ENST00000504387 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
NEDD9-208ENST00000504387 HIVEP1P15822 2718 aa5.22□□□□□ -1.57
NEDD9-208ENST00000504387 PLAC8L1A1L4L8 177 aa5.22□□□□□ -1.57
NEDD9-208ENST00000504387 C3orf84H3BNL1 204 aa5.22□□□□□ -1.57
NEDD9-208ENST00000504387 PRR4Q16378 134 aa5.22□□□□□ -1.57
NEDD9-208ENST00000504387 BAHCC1Q9P281 2608 aa5.22□□□□□ -1.57
NEDD9-208ENST00000504387 FAM229BQ4G0N7 80 aa5.22□□□□□ -1.57
NEDD9-208ENST00000504387 Q6ZQT0 140 aa5.22□□□□□ -1.57
NEDD9-208ENST00000504387 CHCHD10Q8WYQ3 142 aaPredicted RBP5.22□□□□□ -1.57
NEDD9-208ENST00000504387 C16orf74Q96GX8 76 aa5.21□□□□□ -1.57
NEDD9-208ENST00000504387 CELA1Q9UNI1 258 aa5.21□□□□□ -1.57
NEDD9-208ENST00000504387 PKD1L1Q8TDX9 2849 aa5.21□□□□□ -1.58
NEDD9-208ENST00000504387 TRAV7A0A075B6U4 112 aa5.21□□□□□ -1.58
NEDD9-208ENST00000504387 TRBV7-6A0A0J9YX20 115 aa5.21□□□□□ -1.58
NEDD9-208ENST00000504387 BPY2O14599 106 aa5.21□□□□□ -1.58
NEDD9-208ENST00000504387 FAM19A3Q7Z5A8 133 aa5.21□□□□□ -1.58
NEDD9-208ENST00000504387 LINC00575Q6W349 94 aa5.21□□□□□ -1.58
NEDD9-208ENST00000504387 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
NEDD9-208ENST00000504387 TRBV10-3A0A0K0K1G6 114 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 WIPF1O43516 503 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 LY6G6DO95868 133 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 REG3AQ06141 175 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 IL17DQ8TAD2 202 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 KLK12Q9UKR0 248 aa5.19□□□□□ -1.58
NEDD9-208ENST00000504387 MIFP14174 115 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 SPAG11BQ08648 103 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 Q8IZM0 81 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 CYSRT1A8MQ03 144 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 NREPQ16612 68 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 ATP5EP2Q5VTU8 51 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 MUC7Q8TAX7 377 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 ZNF561-AS1K7EIQ3 104 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 HIGD2AQ9BW72 106 aa5.18□□□□□ -1.58
NEDD9-208ENST00000504387 KIAA0087Q14695 138 aa5.17□□□□□ -1.58
NEDD9-208ENST00000504387 FAM30AQ9NZY2 134 aa5.17□□□□□ -1.58
NEDD9-208ENST00000504387 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
NEDD9-208ENST00000504387 NOTCH1P46531 2555 aa5.17□□□□□ -1.58
NEDD9-208ENST00000504387 FSHBP01225 129 aa5.17□□□□□ -1.58
NEDD9-208ENST00000504387 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
NEDD9-208ENST00000504387 TMEM254Q8TBM7 123 aa5.16□□□□□ -1.58
NEDD9-208ENST00000504387 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
NEDD9-208ENST00000504387 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.58
NEDD9-208ENST00000504387 C16orf95Q9H693 158 aa5.15□□□□□ -1.58
NEDD9-208ENST00000504387 CD164L2Q6UWJ8 174 aa5.15□□□□□ -1.59
NEDD9-208ENST00000504387 NBEAL1Q6ZS30 2694 aa5.15□□□□□ -1.59
NEDD9-208ENST00000504387 IGLV1-51P01701 117 aa5.14□□□□□ -1.59
NEDD9-208ENST00000504387 KLKP1Q107X0 134 aa5.14□□□□□ -1.59
NEDD9-208ENST00000504387 DIRC1Q969H9 104 aa5.14□□□□□ -1.59
NEDD9-208ENST00000504387 LINC00167Q96N53 147 aa5.14□□□□□ -1.59
NEDD9-208ENST00000504387 PRO0255Q9UI72 69 aa5.14□□□□□ -1.59
NEDD9-208ENST00000504387 MAST4O15021 2626 aa5.14□□□□□ -1.59
NEDD9-208ENST00000504387 PSPHP1O15172 72 aa5.14□□□□□ -1.59
NEDD9-208ENST00000504387 DEFB116Q30KQ4 102 aa5.13□□□□□ -1.59
NEDD9-208ENST00000504387 CSNK1G2-AS1Q8NCQ2 148 aa5.13□□□□□ -1.59
NEDD9-208ENST00000504387 CMC4P56277 68 aaPredicted RBP5.13□□□□□ -1.59
NEDD9-208ENST00000504387 C1orf195Q5TG92 126 aa5.13□□□□□ -1.59
NEDD9-208ENST00000504387 A0A0G2JQZ4 141 aa5.12□□□□□ -1.59
NEDD9-208ENST00000504387 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
NEDD9-208ENST00000504387 ZNF73O43830 326 aaPredicted RBP5.12□□□□□ -1.59
NEDD9-208ENST00000504387 COX7BP24311 80 aa5.12□□□□□ -1.59
NEDD9-208ENST00000504387 FUSP35637 526 aaKnown RBP eCLIP5.12□□□□□ -1.591e-8■■■□□ 15.2
NEDD9-208ENST00000504387 STAB1Q9NY15 2570 aa5.11□□□□□ -1.59
NEDD9-208ENST00000504387 TRBV7-4A0A0J9YYF1 115 aa5.11□□□□□ -1.59
NEDD9-208ENST00000504387 KRTAP1-3Q8IUG1 177 aa5.11□□□□□ -1.59
NEDD9-208ENST00000504387 INAFM1C9JVW0 142 aa5.11□□□□□ -1.59
NEDD9-208ENST00000504387 C19orf73Q9NVV2 129 aa5.11□□□□□ -1.59
NEDD9-208ENST00000504387 LOC110117498A0A087WWA1 95 aa5.1□□□□□ -1.59
NEDD9-208ENST00000504387 PRYO14603 147 aa5.1□□□□□ -1.59
NEDD9-208ENST00000504387 C6orf48Q9UBA6 75 aa5.1□□□□□ -1.59
NEDD9-208ENST00000504387 A0A1B0GUV1 79 aa5.1□□□□□ -1.59
NEDD9-208ENST00000504387 SMIM29Q86T20 159 aa5.1□□□□□ -1.59
NEDD9-208ENST00000504387 CAMK2N2Q96S95 79 aa5.1□□□□□ -1.59
NEDD9-208ENST00000504387 RPL37AP8A6NKH3 93 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms