RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 C3orf79P0CE67 100 aa12.87□□□□□ -0.35
RNF4-205ENST00000504224 LBHQ53QV2 105 aaPredicted RBP12.87□□□□□ -0.35
RNF4-205ENST00000504224 TMEM170BQ5T4T1 132 aa12.87□□□□□ -0.35
RNF4-205ENST00000504224 CHTOPQ9Y3Y2 248 aaKnown RBP12.86□□□□□ -0.35
RNF4-205ENST00000504224 IGLV5-39A0A0G2JS06 123 aa12.85□□□□□ -0.35
RNF4-205ENST00000504224 C11orf86A6NJI1 115 aa12.85□□□□□ -0.35
RNF4-205ENST00000504224 H0Y8G0 127 aa12.85□□□□□ -0.35
RNF4-205ENST00000504224 PET117Q6UWS5 81 aa12.85□□□□□ -0.35
RNF4-205ENST00000504224 C22orf24Q9Y442 160 aa12.85□□□□□ -0.35
RNF4-205ENST00000504224 ZNF861PO60384 105 aa12.84□□□□□ -0.35
RNF4-205ENST00000504224 KRTDAPP60985 99 aa12.84□□□□□ -0.35
RNF4-205ENST00000504224 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.36
RNF4-205ENST00000504224 TP73-AS1Q9UF72 201 aa12.83□□□□□ -0.36
RNF4-205ENST00000504224 LINC01545Q5VT33 79 aa12.82□□□□□ -0.36
RNF4-205ENST00000504224 SFTA2Q6UW10 78 aa12.82□□□□□ -0.36
RNF4-205ENST00000504224 PFN2P35080 140 aa12.81□□□□□ -0.36
RNF4-205ENST00000504224 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
RNF4-205ENST00000504224 PMCHL2Q9BQD1 86 aa12.79□□□□□ -0.36
RNF4-205ENST00000504224 ERG28Q9UKR5 140 aa12.79□□□□□ -0.36
RNF4-205ENST00000504224 TSPAN13O95857 204 aa12.78□□□□□ -0.36
RNF4-205ENST00000504224 DPM2O94777 84 aa12.77□□□□□ -0.37
RNF4-205ENST00000504224 PLNP26678 52 aa12.77□□□□□ -0.37
RNF4-205ENST00000504224 C20orf202A1L168 122 aa12.76□□□□□ -0.37
RNF4-205ENST00000504224 IGKCP01834 107 aa12.76□□□□□ -0.37
RNF4-205ENST00000504224 COX17Q14061 63 aa12.76□□□□□ -0.37
RNF4-205ENST00000504224 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
RNF4-205ENST00000504224 RPL28P46779 137 aaKnown RBP12.75□□□□□ -0.37
RNF4-205ENST00000504224 GAGE10A6NGK3 116 aa12.74□□□□□ -0.37
RNF4-205ENST00000504224 LINC00167Q96N53 147 aa12.74□□□□□ -0.37
RNF4-205ENST00000504224 IGLV5-37A0A075B6J1 123 aa12.73□□□□□ -0.37
RNF4-205ENST00000504224 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
RNF4-205ENST00000504224 RPL37AP8A6NKH3 93 aa12.73□□□□□ -0.37
RNF4-205ENST00000504224 BCE1O60756 84 aa12.73□□□□□ -0.37
RNF4-205ENST00000504224 SND1-IT1Q9HBX3 110 aa12.72□□□□□ -0.37
RNF4-205ENST00000504224 AKR1D1P51857 326 aa12.71□□□□□ -0.37
RNF4-205ENST00000504224 A0A087X002 238 aa12.7□□□□□ -0.38
RNF4-205ENST00000504224 RPL24P83731 157 aaKnown RBP12.7□□□□□ -0.38
RNF4-205ENST00000504224 TYMSOSQ8TAI1 123 aa12.7□□□□□ -0.38
RNF4-205ENST00000504224 CRYGAP11844 174 aa12.69□□□□□ -0.38
RNF4-205ENST00000504224 LINC00158P58513 81 aa12.69□□□□□ -0.38
RNF4-205ENST00000504224 JOSD1Q15040 202 aaPredicted RBP12.68□□□□□ -0.38
RNF4-205ENST00000504224 SCGB1D1O95968 90 aa12.67□□□□□ -0.38
RNF4-205ENST00000504224 IGKV2-28A0A075B6P5 120 aa12.66□□□□□ -0.38
RNF4-205ENST00000504224 IGKV2D-28P01615 120 aa12.66□□□□□ -0.38
RNF4-205ENST00000504224 MEIG1Q5JSS6 88 aa12.66□□□□□ -0.38
RNF4-205ENST00000504224 ATOH7Q8N100 152 aa12.66□□□□□ -0.38
RNF4-205ENST00000504224 A0A0U1RQV1 116 aa12.65□□□□□ -0.38
RNF4-205ENST00000504224 VPREB1P12018 145 aa12.65□□□□□ -0.38
RNF4-205ENST00000504224 UBE2AP49459 152 aa12.65□□□□□ -0.38
RNF4-205ENST00000504224 ANAPC11Q9NYG5 84 aa12.65□□□□□ -0.38
RNF4-205ENST00000504224 A0A0U1RRA0 63 aa12.64□□□□□ -0.39
RNF4-205ENST00000504224 HERVK_113P61574 105 aa12.64□□□□□ -0.39
RNF4-205ENST00000504224 HERV-K104P63124 156 aa12.64□□□□□ -0.39
RNF4-205ENST00000504224 LOC105371267A0A1B0GV96 52 aa12.63□□□□□ -0.39
RNF4-205ENST00000504224 PYY3Q5JQD4 70 aa12.63□□□□□ -0.39
RNF4-205ENST00000504224 MUC2Q02817 5179 aa12.62□□□□□ -0.39
RNF4-205ENST00000504224 E9PLD3 99 aa12.62□□□□□ -0.39
RNF4-205ENST00000504224 NDUFA12Q9UI09 145 aa12.62□□□□□ -0.39
RNF4-205ENST00000504224 MYMXA0A1B0GTQ4 84 aa12.61□□□□□ -0.39
RNF4-205ENST00000504224 LINC00587B1AMM8 73 aa12.61□□□□□ -0.39
RNF4-205ENST00000504224 LEPROTO15243 131 aa12.6□□□□□ -0.39
RNF4-205ENST00000504224 SMIM13P0DJ93 91 aa12.6□□□□□ -0.39
RNF4-205ENST00000504224 PLEKHB2Q96CS7 222 aa12.59□□□□□ -0.39
RNF4-205ENST00000504224 TSPEAR-AS2P59090 65 aa12.58□□□□□ -0.4
RNF4-205ENST00000504224 ANKRD39Q53RE8 183 aa12.58□□□□□ -0.4
RNF4-205ENST00000504224 KRTAP13-2Q52LG2 175 aa12.57□□□□□ -0.4
RNF4-205ENST00000504224 TMEM126AQ9H061 195 aa12.57□□□□□ -0.4
RNF4-205ENST00000504224 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
RNF4-205ENST00000504224 J3QQQ9 107 aa12.56□□□□□ -0.4
RNF4-205ENST00000504224 FAM19A1Q7Z5A9 133 aa12.56□□□□□ -0.4
RNF4-205ENST00000504224 KRTAP13-1Q8IUC0 172 aa12.56□□□□□ -0.4
RNF4-205ENST00000504224 MIR7-3HGQ8N6C7 128 aa12.56□□□□□ -0.4
RNF4-205ENST00000504224 RETNLBQ9BQ08 111 aa12.56□□□□□ -0.4
RNF4-205ENST00000504224 HSBP1L1C9JCN9 74 aa12.55□□□□□ -0.4
RNF4-205ENST00000504224 TMEM238C9JI98 176 aa12.55□□□□□ -0.4
RNF4-205ENST00000504224 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
RNF4-205ENST00000504224 Q8NDZ9 215 aa12.55□□□□□ -0.4
RNF4-205ENST00000504224 M0R378 163 aa12.54□□□□□ -0.4
RNF4-205ENST00000504224 LGALS3P17931 250 aaKnown RBP12.54□□□□□ -0.4
RNF4-205ENST00000504224 PRLHP81277 87 aa12.54□□□□□ -0.4
RNF4-205ENST00000504224 LINC00304Q8N9R0 145 aa12.54□□□□□ -0.4
RNF4-205ENST00000504224 FAM229BQ4G0N7 80 aa12.53□□□□□ -0.4
RNF4-205ENST00000504224 NMUP48645 174 aa12.52□□□□□ -0.41
RNF4-205ENST00000504224 NCR3O14931 201 aa12.51□□□□□ -0.41
RNF4-205ENST00000504224 VAMP8Q9BV40 100 aa12.51□□□□□ -0.41
RNF4-205ENST00000504224 MIEN1Q9BRT3 115 aa12.49□□□□□ -0.41
RNF4-205ENST00000504224 SMIM6P0DI80 62 aa12.48□□□□□ -0.41
RNF4-205ENST00000504224 TTTY13Q9BZ97 58 aa12.48□□□□□ -0.41
RNF4-205ENST00000504224 PAM16Q9Y3D7 125 aa12.48□□□□□ -0.41
RNF4-205ENST00000504224 S100A12P80511 92 aa12.47□□□□□ -0.41
RNF4-205ENST00000504224 SPATA45Q537H7 98 aa12.47□□□□□ -0.41
RNF4-205ENST00000504224 PCP2Q8IVA1 136 aa12.47□□□□□ -0.41
RNF4-205ENST00000504224 PRYO14603 147 aa12.46□□□□□ -0.41
RNF4-205ENST00000504224 DAND5Q8N907 189 aa12.46□□□□□ -0.41
RNF4-205ENST00000504224 CDIP1Q9H305 208 aa12.46□□□□□ -0.41
RNF4-205ENST00000504224 ZNF815PA8K554 130 aa12.45□□□□□ -0.42
RNF4-205ENST00000504224 HIGD2AQ9BW72 106 aa12.45□□□□□ -0.42
RNF4-205ENST00000504224 IGLV7-46A0A075B6I9 117 aa12.44□□□□□ -0.42
RNF4-205ENST00000504224 KRTAP9-2Q9BYQ4 174 aa12.43□□□□□ -0.42
RNF4-205ENST00000504224 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms