RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 IGKCP01834 107 aa13.34□□□□□ -0.27
LSM6-203ENST00000503982 HIST3H2BBQ8N257 126 aa13.34□□□□□ -0.27
LSM6-203ENST00000503982 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
LSM6-203ENST00000503982 ZNF625Q96I27 306 aaPredicted RBP13.32□□□□□ -0.28
LSM6-203ENST00000503982 IGLV1-50A0A075B6I6 118 aa13.3□□□□□ -0.28
LSM6-203ENST00000503982 S100A6P06703 90 aa13.3□□□□□ -0.28
LSM6-203ENST00000503982 MRPL55Q7Z7F7 128 aaKnown RBP13.29□□□□□ -0.28
LSM6-203ENST00000503982 HIST1H2BLQ99880 126 aa13.29□□□□□ -0.28
LSM6-203ENST00000503982 AKR1D1P51857 326 aa13.28□□□□□ -0.28
LSM6-203ENST00000503982 PMCHL2Q9BQD1 86 aa13.28□□□□□ -0.28
LSM6-203ENST00000503982 C5orf52A6NGY3 159 aa13.27□□□□□ -0.29
LSM6-203ENST00000503982 ZNF861PO60384 105 aa13.27□□□□□ -0.29
LSM6-203ENST00000503982 HERVK_113P61574 105 aa13.27□□□□□ -0.29
LSM6-203ENST00000503982 COX17Q14061 63 aa13.27□□□□□ -0.29
LSM6-203ENST00000503982 LEPROTO15243 131 aa13.26□□□□□ -0.29
LSM6-203ENST00000503982 PLEKHB2Q96CS7 222 aa13.26□□□□□ -0.29
LSM6-203ENST00000503982 TP73-AS1Q9UF72 201 aa13.26□□□□□ -0.29
LSM6-203ENST00000503982 GAGE10A6NGK3 116 aa13.25□□□□□ -0.29
LSM6-203ENST00000503982 S100A2P29034 98 aa13.25□□□□□ -0.29
LSM6-203ENST00000503982 RPL13AP40429 203 aaKnown RBP13.25□□□□□ -0.29
LSM6-203ENST00000503982 KRTDAPP60985 99 aa13.25□□□□□ -0.29
LSM6-203ENST00000503982 NKAPP1Q8N9T2 125 aa13.25□□□□□ -0.29
LSM6-203ENST00000503982 C20orf202A1L168 122 aa13.24□□□□□ -0.29
LSM6-203ENST00000503982 RPL37AP8A6NKH3 93 aa13.24□□□□□ -0.29
LSM6-203ENST00000503982 E9PLD3 99 aa13.24□□□□□ -0.29
LSM6-203ENST00000503982 KRTAP1-4P0C5Y4 121 aa13.24□□□□□ -0.29
LSM6-203ENST00000503982 HERV-K104P63124 156 aa13.24□□□□□ -0.29
LSM6-203ENST00000503982 LINC00167Q96N53 147 aa13.23□□□□□ -0.29
LSM6-203ENST00000503982 RPL28P46779 137 aaKnown RBP13.22□□□□□ -0.29
LSM6-203ENST00000503982 NMUP48645 174 aa13.22□□□□□ -0.29
LSM6-203ENST00000503982 SNRPEP62304 92 aaKnown RBP13.22□□□□□ -0.29
LSM6-203ENST00000503982 ERG28Q9UKR5 140 aa13.22□□□□□ -0.29
LSM6-203ENST00000503982 J3QQQ9 107 aa13.21□□□□□ -0.29
LSM6-203ENST00000503982 BCE1O60756 84 aa13.21□□□□□ -0.29
LSM6-203ENST00000503982 PFN2P35080 140 aa13.21□□□□□ -0.29
LSM6-203ENST00000503982 TSPEAR-AS2P59090 65 aa13.21□□□□□ -0.29
LSM6-203ENST00000503982 NDUFA12Q9UI09 145 aa13.2□□□□□ -0.3
LSM6-203ENST00000503982 RNF213Q63HN8 5207 aa13.2□□□□□ -0.3
LSM6-203ENST00000503982 MYMXA0A1B0GTQ4 84 aa13.19□□□□□ -0.3
LSM6-203ENST00000503982 LINC00587B1AMM8 73 aa13.19□□□□□ -0.3
LSM6-203ENST00000503982 UBE2AP49459 152 aa13.17□□□□□ -0.3
LSM6-203ENST00000503982 LGALS3P17931 250 aaKnown RBP13.15□□□□□ -0.3
LSM6-203ENST00000503982 PRR4Q16378 134 aa13.15□□□□□ -0.3
LSM6-203ENST00000503982 IGLV5-37A0A075B6J1 123 aa13.13□□□□□ -0.31
LSM6-203ENST00000503982 IGKV2-28A0A075B6P5 120 aa13.13□□□□□ -0.31
LSM6-203ENST00000503982 IGKV2D-28P01615 120 aa13.13□□□□□ -0.31
LSM6-203ENST00000503982 SND1-IT1Q9HBX3 110 aa13.12□□□□□ -0.31
LSM6-203ENST00000503982 LPAP08519 4548 aa13.11□□□□□ -0.31
LSM6-203ENST00000503982 TSPAN13O95857 204 aa13.11□□□□□ -0.31
LSM6-203ENST00000503982 CRYGAP11844 174 aa13.1□□□□□ -0.31
LSM6-203ENST00000503982 IGKV2D-26A0A0A0MRZ7 120 aa13.09□□□□□ -0.31
LSM6-203ENST00000503982 RPL24P83731 157 aaKnown RBP13.09□□□□□ -0.31
LSM6-203ENST00000503982 TYMSOSQ8TAI1 123 aa13.09□□□□□ -0.31
LSM6-203ENST00000503982 LOC107984156A0A0G2JMH3 177 aa13.08□□□□□ -0.32
LSM6-203ENST00000503982 SMIM13P0DJ93 91 aa13.08□□□□□ -0.32
LSM6-203ENST00000503982 LINC00158P58513 81 aa13.08□□□□□ -0.32
LSM6-203ENST00000503982 MEIG1Q5JSS6 88 aa13.08□□□□□ -0.32
LSM6-203ENST00000503982 ARL17AQ8IVW1 177 aa13.08□□□□□ -0.32
LSM6-203ENST00000503982 A0A087X002 238 aa13.06□□□□□ -0.32
LSM6-203ENST00000503982 A0A0J9YXY3 114 aa13.06□□□□□ -0.32
LSM6-203ENST00000503982 FAM19A1Q7Z5A9 133 aa13.06□□□□□ -0.32
LSM6-203ENST00000503982 ANAPC11Q9NYG5 84 aa13.06□□□□□ -0.32
LSM6-203ENST00000503982 TIMM17BO60830 172 aa13.05□□□□□ -0.32
LSM6-203ENST00000503982 VPREB1P12018 145 aa13.05□□□□□ -0.32
LSM6-203ENST00000503982 ANKRD39Q53RE8 183 aa13.05□□□□□ -0.32
LSM6-203ENST00000503982 ATOH7Q8N100 152 aa13.05□□□□□ -0.32
LSM6-203ENST00000503982 MIR7-3HGQ8N6C7 128 aa13.05□□□□□ -0.32
LSM6-203ENST00000503982 A0A0U1RRA0 63 aa13.03□□□□□ -0.32
LSM6-203ENST00000503982 PRLHP81277 87 aa13.02□□□□□ -0.33
LSM6-203ENST00000503982 ZNF815PA8K554 130 aa13.01□□□□□ -0.33
LSM6-203ENST00000503982 TMEM238C9JI98 176 aa13.01□□□□□ -0.33
LSM6-203ENST00000503982 LITAFQ99732 161 aa13.01□□□□□ -0.33
LSM6-203ENST00000503982 TMEM126AQ9H061 195 aa13.01□□□□□ -0.33
LSM6-203ENST00000503982 KRTAP13-1Q8IUC0 172 aa13□□□□□ -0.33
LSM6-203ENST00000503982 Q8NDZ9 215 aa12.99□□□□□ -0.33
LSM6-203ENST00000503982 HSBP1L1C9JCN9 74 aa12.98□□□□□ -0.33
LSM6-203ENST00000503982 SCGB1D1O95968 90 aa12.97□□□□□ -0.33
LSM6-203ENST00000503982 JOSD1Q15040 202 aaPredicted RBP12.97□□□□□ -0.33
LSM6-203ENST00000503982 TTTY13Q9BZ97 58 aa12.97□□□□□ -0.33
LSM6-203ENST00000503982 PPDPFQ9H3Y8 114 aa12.97□□□□□ -0.33
LSM6-203ENST00000503982 ADAMTSL4-AS1Q5T5F5 129 aa12.96□□□□□ -0.33
LSM6-203ENST00000503982 NDUFC2O95298 119 aa12.95□□□□□ -0.34
LSM6-203ENST00000503982 FAM229BQ4G0N7 80 aa12.95□□□□□ -0.34
LSM6-203ENST00000503982 TMA7Q9Y2S6 64 aaKnown RBP12.95□□□□□ -0.34
LSM6-203ENST00000503982 M0R378 163 aa12.94□□□□□ -0.34
LSM6-203ENST00000503982 KRTAP13-2Q52LG2 175 aa12.94□□□□□ -0.34
LSM6-203ENST00000503982 PCP2Q8IVA1 136 aa12.94□□□□□ -0.34
LSM6-203ENST00000503982 BOD1L2Q8IYS8 172 aa12.94□□□□□ -0.34
LSM6-203ENST00000503982 HIGD2AQ9BW72 106 aa12.94□□□□□ -0.34
LSM6-203ENST00000503982 DAND5Q8N907 189 aa12.93□□□□□ -0.34
LSM6-203ENST00000503982 SPANXDQ9BXN6 97 aa12.93□□□□□ -0.34
LSM6-203ENST00000503982 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
LSM6-203ENST00000503982 TRBV10-2A0A0K0K1G8 114 aa12.92□□□□□ -0.34
LSM6-203ENST00000503982 Q6ZVH6 145 aa12.92□□□□□ -0.34
LSM6-203ENST00000503982 LINC00304Q8N9R0 145 aa12.92□□□□□ -0.34
LSM6-203ENST00000503982 MIEN1Q9BRT3 115 aa12.92□□□□□ -0.34
LSM6-203ENST00000503982 SOSTDC1Q6X4U4 206 aa12.91□□□□□ -0.34
LSM6-203ENST00000503982 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
LSM6-203ENST00000503982 NCR3O14931 201 aa12.89□□□□□ -0.35
LSM6-203ENST00000503982 LINC00308Q8TCZ7 52 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms