RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 MRAP2Q96G30 205 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 BTF3L4Q96K17 158 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 RBM12B-AS1Q9P1G2 102 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 APOBP04114 4563 aaKnown RBP2.07□□□□□ -2.08
UBE3D-205ENST00000503942 TRBV24-1A0A075B6N3 115 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 TRBV25-1A0A075B6N4 114 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 IGHV1-24A0A0C4DH33 117 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 TRBV27A0A0K0K1C4 114 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 A0A1B0GW15 77 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 IBA57-AS1B1ANH7 110 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 I3L3M4 83 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 LECT2O14960 151 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 ESDP10768 282 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 RPL39P62891 51 aaKnown RBP2.06□□□□□ -2.08
UBE3D-205ENST00000503942 FABP9Q0Z7S8 132 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 COTL1Q14019 142 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 C1orf134Q5TEV5 83 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 ENHOQ6UWT2 76 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 SVBPQ8N300 66 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 PRELID3AQ96N28 172 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 SMIM2Q9BVW6 85 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 ST20Q9HBF5 79 aa2.06□□□□□ -2.08
UBE3D-205ENST00000503942 HSPG2P98160 4391 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 IGLV10-54A0A075B6I4 117 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 TRAV9-1A0A075B6T8 112 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 A0A087WX48 190 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 IGKV3OR2-268A0A0C4DH90 116 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 H3BQ85 93 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 ANGP03950 147 aaKnown RBP2.05□□□□□ -2.08
UBE3D-205ENST00000503942 S100A8P05109 93 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 FGF6P10767 208 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 S100PP25815 95 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 IFI27P40305 119 aaPredicted RBP2.05□□□□□ -2.08
UBE3D-205ENST00000503942 NDUFA5Q16718 116 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 KRTAP26-1Q6PEX3 210 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 Q6ZUT4 128 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 LINC00269Q8N2A0 174 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 C20orf78Q9BR46 151 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 GNB1LQ9BYB4 327 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 SMCO4Q9NRQ5 59 aa2.05□□□□□ -2.08
UBE3D-205ENST00000503942 FAT1Q14517 4588 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 A0A087WTM6 91 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 UBE2L6O14933 153 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 PPBPP02775 128 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 TRGC2P03986 189 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 FCER1GP30273 86 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 TMEM97Q5BJF2 176 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 PDZD11Q5EBL8 140 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 SPATA12Q7Z6I5 190 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 Q8N8P6 123 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.04□□□□□ -2.08
UBE3D-205ENST00000503942 MAP1LC3AQ9H492 121 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 UBE2D4Q9Y2X8 147 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 TRAPPC1Q9Y5R8 145 aa2.04□□□□□ -2.08
UBE3D-205ENST00000503942 RYR1P21817 5038 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 TRAV8-3A0A0A6YYJ7 113 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 LINC00959A0A1B0GUT2 108 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 PSCAO43653 123 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 NUPR1O60356 82 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 PPP1R17O96001 155 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 IGLV6-57P01721 117 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 HAMPP81172 84 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 COX6A2Q02221 97 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 PMCHL1Q16048 86 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 AMMECR1LQ6DCA0 310 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 MRPL52Q86TS9 123 aaKnown RBP2.03□□□□□ -2.08
UBE3D-205ENST00000503942 C10orf126Q8N4M7 172 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 OR5A1Q8NGJ0 315 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 C18orf32Q8TCD1 76 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 LINC00526Q96FQ7 95 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 CDC42SE2Q9NRR3 84 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
UBE3D-205ENST00000503942 HERC2O95714 4834 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 TRAV13-1A0A0B4J241 112 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 LINC01546A6NGU7 62 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 IGIPA6NJ69 53 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 CCL25O15444 150 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 CRPP02741 224 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 MT-ND6P03923 174 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
UBE3D-205ENST00000503942 XCL1P47992 114 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 MIAQ16674 131 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 C5orf38Q86SI9 138 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 FAM19A2Q8N3H0 131 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 TIMM21Q9BVV7 248 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 NXT2Q9NPJ8 142 aaKnown RBP2.02□□□□□ -2.09
UBE3D-205ENST00000503942 LAMTOR2Q9Y2Q5 125 aa2.02□□□□□ -2.09
UBE3D-205ENST00000503942 A8MWP4 228 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 K7EP13 123 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 LINC00614P0C842 121 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 ZNF25P17030 456 aaPredicted RBP2.01□□□□□ -2.09
UBE3D-205ENST00000503942 UBE2D1P51668 147 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 PKIAP61925 76 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 MRPS36P82909 103 aaKnown RBP2.01□□□□□ -2.09
UBE3D-205ENST00000503942 Q0VG73 95 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 Q8N814 137 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 TOMM6Q96B49 74 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 SCGB3A1Q96QR1 104 aa2.01□□□□□ -2.09
UBE3D-205ENST00000503942 AMELXQ99217 191 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms