RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 FAM218AQ96MZ4 157 aa3.16□□□□□ -1.9
MATR3-202ENST00000502422 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
MATR3-202ENST00000502422 TRBV27A0A0K0K1C4 114 aa3.15□□□□□ -1.91
MATR3-202ENST00000502422 BAALC-AS2P0C853 105 aa3.15□□□□□ -1.91
MATR3-202ENST00000502422 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.91
MATR3-202ENST00000502422 SUMO4Q6EEV6 95 aa3.15□□□□□ -1.91
MATR3-202ENST00000502422 FP248Q71RG6 208 aaPredicted RBP3.15□□□□□ -1.91
MATR3-202ENST00000502422 ZFAND2AQ8N6M9 145 aa3.15□□□□□ -1.91
MATR3-202ENST00000502422 C11orf68Q9H3H3 251 aaKnown RBP3.15□□□□□ -1.91
MATR3-202ENST00000502422 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
MATR3-202ENST00000502422 IGLV4-3A0A075B6K6 122 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 TRAV12-3A0A0B4J271 114 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 TRBV6-5A0A0K0K1A5 114 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 FAM236DA0A1B0GTK5 79 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 C16orf90A8MZG2 172 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 NDUFC2O95298 119 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 FAM236CP0DP71 79 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 LINC00846Q9NV44 126 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 PKD1P98161 4303 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 TRAV12-2A0A075B6T6 113 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 TRAV10A0A0B4J240 114 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 IGHV3-35A0A0C4DH35 117 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 IGHV1-58A0A0C4DH39 117 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 GNRH2O43555 120 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 TIMM17BO60830 172 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 Q75L30 129 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 UBE2DNLQ8IWF7 75 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 Q8N1X5 172 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 NDUFA12Q9UI09 145 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 SERP1Q9Y6X1 66 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 DNAH6Q9C0G6 4158 aa3.14□□□□□ -1.91
MATR3-202ENST00000502422 TRAV21A0A0B4J279 112 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 IGHV3-66A0A0C4DH42 116 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 LYRM9A8MSI8 78 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 INAFM2P0DMQ5 153 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 RNASE4P34096 147 aaKnown RBP3.13□□□□□ -1.91
MATR3-202ENST00000502422 CMC4P56277 68 aaPredicted RBP3.13□□□□□ -1.91
MATR3-202ENST00000502422 MRPS36P82909 103 aaKnown RBP3.13□□□□□ -1.91
MATR3-202ENST00000502422 ODF3L2Q3SX64 289 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 LYPD5Q6UWN5 251 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 VSIG2Q96IQ7 327 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 OBSCN-AS1Q96MR7 158 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 HSPG2P98160 4391 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 H7BZZ5 65 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 RPL28P46779 137 aaKnown RBP3.13□□□□□ -1.91
MATR3-202ENST00000502422 RBMY1FQ15415 496 aaKnown RBP3.13□□□□□ -1.91
MATR3-202ENST00000502422 C1orf134Q5TEV5 83 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 UNQ9165/PRO28630Q6UXU0 137 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 SOSTDC1Q6X4U4 206 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 Q6ZTC4 211 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 C20orf203Q8NBC4 194 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 LENEPQ9Y5L5 61 aa3.13□□□□□ -1.91
MATR3-202ENST00000502422 DYNC1H1Q14204 4646 aaKnown RBP3.13□□□□□ -1.91
MATR3-202ENST00000502422 IGHV3OR16-13A0A075B7E8 117 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 DEFB131BA0A096LNP1 70 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 IGHV3-74A0A0B4J1X5 117 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 XCL1P47992 114 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 LINC00308Q8TCZ7 52 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 XCL2Q9UBD3 114 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 DNAH11Q96DT5 4516 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 IGKV3-7A0A075B6H7 116 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 M0QY20 66 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 DEFB1P60022 68 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 TMEM243Q9BU79 118 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 Q9HAA7 133 aa3.12□□□□□ -1.91
MATR3-202ENST00000502422 HERC1Q15751 4861 aa3.11□□□□□ -1.91
MATR3-202ENST00000502422 DNAH17Q9UFH2 4485 aa3.11□□□□□ -1.91
MATR3-202ENST00000502422 DNAL4O96015 105 aa3.11□□□□□ -1.91
MATR3-202ENST00000502422 MIFP14174 115 aa3.11□□□□□ -1.91
MATR3-202ENST00000502422 KRTAP10-2P60368 255 aa3.11□□□□□ -1.91
MATR3-202ENST00000502422 CIRBPQ14011 172 aaKnown RBP3.11□□□□□ -1.91
MATR3-202ENST00000502422 C14orf132Q9NPU4 83 aa3.11□□□□□ -1.91
MATR3-202ENST00000502422 LINC00474Q9P2X8 69 aa3.11□□□□□ -1.91
MATR3-202ENST00000502422 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 IGHV3-49A0A0A0MS15 119 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 IGHV4-28A0A0C4DH34 117 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 MRPL55Q7Z7F7 128 aaKnown RBP3.1□□□□□ -1.91
MATR3-202ENST00000502422 C20orf197Q8N268 126 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 COPS9Q8WXC6 57 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 NACAE9PAV3 2078 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 SOCS3O14543 225 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 NDUFA1O15239 70 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 RBMY1A1P0DJD3 496 aaKnown RBP3.1□□□□□ -1.91
MATR3-202ENST00000502422 RBMY1CP0DJD4 496 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 KLK9Q2XQG4 91 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 Q8NAQ8 132 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 ZNF625Q96I27 306 aaPredicted RBP3.1□□□□□ -1.91
MATR3-202ENST00000502422 KLK9Q9UKQ9 250 aa3.1□□□□□ -1.91
MATR3-202ENST00000502422 A0A0U1RQV1 116 aa3.09□□□□□ -1.91
MATR3-202ENST00000502422 K7EMT4 169 aa3.09□□□□□ -1.91
MATR3-202ENST00000502422 NDUFA4O00483 81 aa3.09□□□□□ -1.91
MATR3-202ENST00000502422 SS18Q15532 418 aa3.09□□□□□ -1.91
MATR3-202ENST00000502422 RNASE13Q5GAN3 156 aaKnown RBP3.09□□□□□ -1.91
MATR3-202ENST00000502422 FAM74A4Q5TZK3 123 aa3.09□□□□□ -1.91
MATR3-202ENST00000502422 Q6ZR54 194 aa3.09□□□□□ -1.91
MATR3-202ENST00000502422 TRAV23DV6A0A075B6W5 121 aa3.09□□□□□ -1.92
MATR3-202ENST00000502422 A0A087WYN8 130 aa3.09□□□□□ -1.92
MATR3-202ENST00000502422 F6UB75 175 aa3.09□□□□□ -1.92
MATR3-202ENST00000502422 DEFB131AP59861 70 aa3.09□□□□□ -1.92
MATR3-202ENST00000502422 RHPN1-AS1Q9BWJ2 59 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms