RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 PMCHL2Q9BQD1 86 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
FXN-205ENST00000498653 IGLV5-45A0A087WSX0 123 aa3.25□□□□□ -1.89
FXN-205ENST00000498653 A0A087WZ39 114 aa3.25□□□□□ -1.89
FXN-205ENST00000498653 IGHV3OR16-9A0A0B4J2B5 98 aa3.25□□□□□ -1.89
FXN-205ENST00000498653 IGHV1-58A0A0C4DH39 117 aa3.25□□□□□ -1.89
FXN-205ENST00000498653 SCGB1D1O95968 90 aa3.25□□□□□ -1.89
FXN-205ENST00000498653 ZNF22P17026 224 aaPredicted RBP3.25□□□□□ -1.89
FXN-205ENST00000498653 HERVK_113P61574 105 aa3.25□□□□□ -1.89
FXN-205ENST00000498653 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
FXN-205ENST00000498653 IGHV3-64A0A075B6Q5 118 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 TMEM223A0PJW6 202 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 USP17L23D6RBM5 183 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 PRSS2P07478 247 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 SPINK8P0C7L1 97 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 PRR4Q16378 134 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 C14orf177Q52M58 125 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 ORAOV1Q8WV07 137 aa3.24□□□□□ -1.89
FXN-205ENST00000498653 hDV102S1A0JD36 115 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 HSBP1L1C9JCN9 74 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 F8WDY8 70 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 KRTAP4-16G5E9R7 235 aaPredicted RBP3.23□□□□□ -1.89
FXN-205ENST00000498653 LECT2O14960 151 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 SPAG11BQ08648 103 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 JOSD1Q15040 202 aaPredicted RBP3.23□□□□□ -1.89
FXN-205ENST00000498653 HIGD2BQ4VC39 106 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 ATOH7Q8N100 152 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 C15orf56Q8N910 161 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 Q8N9P0 234 aaPredicted RBP3.23□□□□□ -1.89
FXN-205ENST00000498653 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 PLEKHB2Q96CS7 222 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 TOMM7Q9P0U1 55 aa3.23□□□□□ -1.89
FXN-205ENST00000498653 GVQW2A0A096LPI5 108 aaPredicted RBP3.22□□□□□ -1.89
FXN-205ENST00000498653 LOC105371267A0A1B0GV96 52 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 LEPROTO15243 131 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 WFDC2Q14508 124 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 C6orf226Q5I0X4 101 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 Q8IZM0 81 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 STPG4Q8N801 248 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 C2orf48Q96LS8 159 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
FXN-205ENST00000498653 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.21□□□□□ -1.9
FXN-205ENST00000498653 E9PLD3 99 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 J3QQQ9 107 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 NDUFA1O15239 70 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 LGALS3P17931 250 aaKnown RBP3.21□□□□□ -1.9
FXN-205ENST00000498653 CXCL5P42830 114 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 CKS1BP61024 79 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 SYCNQ0VAF6 134 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 KIAA0087Q14695 138 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 KRTAP19-2Q3LHN2 52 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 PYY3Q5JQD4 70 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 LINC00526Q96FQ7 95 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 CAMK2N2Q96S95 79 aa3.21□□□□□ -1.9
FXN-205ENST00000498653 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.2□□□□□ -1.9
FXN-205ENST00000498653 MYMXA0A1B0GTQ4 84 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 NMUP48645 174 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 MAJINQ3KP22 176 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 SFTA2Q6UW10 78 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 C2orf82Q6UX34 121 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 UNQ6190/PRO20217Q6UXQ8 127 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 CARD19Q96LW7 228 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 VAMP8Q9BV40 100 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 NDUFA12Q9UI09 145 aa3.2□□□□□ -1.9
FXN-205ENST00000498653 IGKV2D-26A0A0A0MRZ7 120 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 TRBV30A0A0K0K1B3 111 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 KRTAP1-4P0C5Y4 121 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 SMIM6P0DI80 62 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 TSPEAR-AS2P59090 65 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 CNBPP62633 177 aaKnown RBP3.19□□□□□ -1.9
FXN-205ENST00000498653 HERV-K104P63124 156 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 S100A12P80511 92 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 SPATA45Q537H7 98 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 PKIGQ9Y2B9 76 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 PAM16Q9Y3D7 125 aa3.19□□□□□ -1.9
FXN-205ENST00000498653 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
FXN-205ENST00000498653 GAGE10A6NGK3 116 aa3.18□□□□□ -1.9
FXN-205ENST00000498653 ZNF815PA8K554 130 aa3.18□□□□□ -1.9
FXN-205ENST00000498653 LINC00587B1AMM8 73 aa3.18□□□□□ -1.9
FXN-205ENST00000498653 MEIG1Q5JSS6 88 aa3.18□□□□□ -1.9
FXN-205ENST00000498653 C9orf163Q8N9P6 203 aa3.18□□□□□ -1.9
FXN-205ENST00000498653 ZNF625Q96I27 306 aaPredicted RBP3.18□□□□□ -1.9
FXN-205ENST00000498653 C6orf48Q9UBA6 75 aa3.18□□□□□ -1.9
FXN-205ENST00000498653 LOC107984640A0A0U1RRK4 108 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 COX8AP10176 69 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 PFN2P35080 140 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 LINC00158P58513 81 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 CIRBPQ14011 172 aaKnown RBP3.17□□□□□ -1.9
FXN-205ENST00000498653 C9orf116Q5BN46 136 aaPredicted RBP3.17□□□□□ -1.9
FXN-205ENST00000498653 SCGB1D4Q6XE38 83 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 PCP2Q8IVA1 136 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 TTTY13Q9BZ97 58 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 ERG28Q9UKR5 140 aa3.17□□□□□ -1.9
FXN-205ENST00000498653 A0A0J9YXY3 114 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 A0A0U1RRA0 63 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 DLEU1O43261 78 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 TIMM17BO60830 172 aa3.16□□□□□ -1.9
FXN-205ENST00000498653 TLX1NBP0CAT3 122 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms