RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 POLA1P09884 1462 aaPredicted RBP-0.4□□□□□ -2.47
RBM39-242ENST00000498280 KTN1Q86UP2 1357 aaKnown RBP-0.4□□□□□ -2.47
RBM39-242ENST00000498280 SNAPC5O75971 98 aa-0.4□□□□□ -2.47
RBM39-242ENST00000498280 MT1BP07438 61 aa-0.4□□□□□ -2.47
RBM39-242ENST00000498280 MGPP08493 103 aa-0.4□□□□□ -2.47
RBM39-242ENST00000498280 C10orf113Q5VZT2 155 aa-0.4□□□□□ -2.47
RBM39-242ENST00000498280 TMEM263Q8WUH6 116 aaKnown RBP-0.4□□□□□ -2.47
RBM39-242ENST00000498280 SPRR4Q96PI1 79 aa-0.4□□□□□ -2.47
RBM39-242ENST00000498280 CDC42SE2Q9NRR3 84 aa-0.4□□□□□ -2.47
RBM39-242ENST00000498280 GAPVD1Q14C86 1478 aa-0.41□□□□□ -2.47
RBM39-242ENST00000498280 NALCNQ8IZF0 1738 aa-0.41□□□□□ -2.47
RBM39-242ENST00000498280 FRYLO94915 3013 aa-0.41□□□□□ -2.47
RBM39-242ENST00000498280 URB1O60287 2271 aaKnown RBP-0.41□□□□□ -2.47
RBM39-242ENST00000498280 CMYA5Q8N3K9 4069 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 UBE2L5PA0A1B0GUS4 154 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 UBA52P62987 128 aaKnown RBP-0.41□□□□□ -2.48
RBM39-242ENST00000498280 UBE2L3P68036 154 aaKnown RBP-0.41□□□□□ -2.48
RBM39-242ENST00000498280 RPL13AP3Q6NVV1 102 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 KRTAP8-1Q8IUC2 63 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 FAM223AQ8IWN6 122 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 FXYD6Q9H0Q3 95 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 DPH3P1Q9H4G8 78 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 FAIMQ9NVQ4 179 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 UQCR10Q9UDW1 63 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 ARL2-SNX15V9GYD0 113 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 DNAH10Q8IVF4 4471 aa-0.41□□□□□ -2.48
RBM39-242ENST00000498280 HMGXB3Q12766 1538 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 DNAH6Q9C0G6 4158 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 SCN7AQ01118 1682 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 PRUNE2Q8WUY3 3088 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 LOC730098B7Z3J9 87 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 GNG11P61952 73 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 KRTAP6-2Q3LI66 62 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 SMG1Q96Q15 3661 aaKnown RBP-0.42□□□□□ -2.48
RBM39-242ENST00000498280 MAGI1Q96QZ7 1491 aaPredicted RBP-0.42□□□□□ -2.48
RBM39-242ENST00000498280 ZZEF1O43149 2961 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 DNAH8Q96JB1 4490 aa-0.42□□□□□ -2.48
RBM39-242ENST00000498280 EHBP1L1Q8N3D4 1523 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 XIRP2A4UGR9 3374 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 DNAJC13O75165 2243 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 TRBV7-4A0A0J9YYF1 115 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 LINC00959A0A1B0GUT2 108 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 MT1HL1P0DM35 61 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 SFTA2Q6UW10 78 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 FDCSPQ8NFU4 85 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 MANBALQ9NQG1 85 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 KIAA0556O60303 1618 aa-0.43□□□□□ -2.48
RBM39-242ENST00000498280 HTTP42858 3142 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 DIP2CQ9Y2E4 1556 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 PDE4DIPQ5VU43 2346 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 A0A1B0GV90 55 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 FAM24AA6NFZ4 105 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 Q0VG73 95 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 KLK9Q2XQG4 91 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 LCN9Q8WX39 176 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 FAM167A-AS1Q96KT0 104 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 LINC01600Q96MT4 127 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 MYOM2P54296 1465 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 TRRAPQ9Y4A5 3859 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 DNAH17Q9UFH2 4485 aa-0.44□□□□□ -2.48
RBM39-242ENST00000498280 SCAPERQ9BY12 1400 aa-0.45□□□□□ -2.48
RBM39-242ENST00000498280 LCE6AA0A183 80 aa-0.45□□□□□ -2.48
RBM39-242ENST00000498280 DLEU1O43261 78 aa-0.45□□□□□ -2.48
RBM39-242ENST00000498280 ATP5EP56381 51 aaPredicted RBP-0.45□□□□□ -2.48
RBM39-242ENST00000498280 WHAMMP3Q1A5X7 153 aa-0.45□□□□□ -2.48
RBM39-242ENST00000498280 NUP188Q5SRE5 1749 aa-0.45□□□□□ -2.48
RBM39-242ENST00000498280 VPS13AQ96RL7 3174 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 SPTBN5Q9NRC6 3674 aaKnown RBP-0.46□□□□□ -2.48
RBM39-242ENST00000498280 MRC2Q9UBG0 1479 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 SLIT1O75093 1534 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 ASXL1Q8IXJ9 1541 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 FAM223BA6NKX1 122 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 F6UZH7 168 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 SPINK4O60575 86 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 DEFB105AQ8NG35 78 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 VPS13DQ5THJ4 4388 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 TOP2BQ02880 1626 aa-0.46□□□□□ -2.48
RBM39-242ENST00000498280 XRN1Q8IZH2 1706 aaKnown RBP-0.47□□□□□ -2.48
RBM39-242ENST00000498280 ADGRL2O95490 1459 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 C1orf167Q5SNV9 1468 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 DNAH2Q9P225 4427 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 M0R2T5 61 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 TRAPPC2P0DI81 140 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 TRAPPC2BP0DI82 140 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 UBE2D3P61077 147 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 UBE2D2P62837 147 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 SVBPQ8N300 66 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 IER3IP1Q9Y5U9 82 aa-0.47□□□□□ -2.48
RBM39-242ENST00000498280 A0A0G2JMZ2 1700 aa-0.47□□□□□ -2.49
RBM39-242ENST00000498280 IQSEC2Q5JU85 1478 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 SETBP1Q9Y6X0 1596 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 A0A1B0GWA3 101 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 EFCAB10A6NFE3 127 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 SYS1-DBNDD2H3BUS1 97 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 COX6CP09669 75 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 GNG4P50150 75 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 PPP3R1P63098 170 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 MT1HP80294 61 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 PRO1933Q9H354 126 aa-0.48□□□□□ -2.49
RBM39-242ENST00000498280 PRO1854Q9UHT4 67 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms