RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 PANO1I0J062 215 aa10.23□□□□□ -0.77
CTDSP1-214ENST00000497677 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
CTDSP1-214ENST00000497677 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
CTDSP1-214ENST00000497677 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
CTDSP1-214ENST00000497677 MEIG1Q5JSS6 88 aa10.22□□□□□ -0.77
CTDSP1-214ENST00000497677 LITAFQ99732 161 aa10.22□□□□□ -0.77
CTDSP1-214ENST00000497677 INAFM2P0DMQ5 153 aa10.21□□□□□ -0.77
CTDSP1-214ENST00000497677 SPAG11BQ08648 103 aa10.21□□□□□ -0.77
CTDSP1-214ENST00000497677 KIAA0087Q14695 138 aa10.21□□□□□ -0.77
CTDSP1-214ENST00000497677 LINC00528Q8N1L1 170 aa10.21□□□□□ -0.77
CTDSP1-214ENST00000497677 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.2□□□□□ -0.78
CTDSP1-214ENST00000497677 COX17Q14061 63 aa10.2□□□□□ -0.78
CTDSP1-214ENST00000497677 FXYD2P54710 66 aa10.19□□□□□ -0.78
CTDSP1-214ENST00000497677 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
CTDSP1-214ENST00000497677 ZNF561-AS1K7EIQ3 104 aa10.18□□□□□ -0.78
CTDSP1-214ENST00000497677 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
CTDSP1-214ENST00000497677 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
CTDSP1-214ENST00000497677 C2orf48Q96LS8 159 aa10.18□□□□□ -0.78
CTDSP1-214ENST00000497677 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
CTDSP1-214ENST00000497677 ERG28Q9UKR5 140 aa10.17□□□□□ -0.78
CTDSP1-214ENST00000497677 A0A1B0GWB2 263 aa10.16□□□□□ -0.78
CTDSP1-214ENST00000497677 PLA2G1BP04054 148 aaKnown RBP10.16□□□□□ -0.78
CTDSP1-214ENST00000497677 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
CTDSP1-214ENST00000497677 ADAMTSL4-AS1Q5T5F5 129 aa10.16□□□□□ -0.78
CTDSP1-214ENST00000497677 MUSTN1Q8IVN3 82 aa10.16□□□□□ -0.78
CTDSP1-214ENST00000497677 NHP2Q9NX24 153 aaKnown RBP10.15□□□□□ -0.78
CTDSP1-214ENST00000497677 FLG2Q5D862 2391 aaPredicted RBP10.15□□□□□ -0.79
CTDSP1-214ENST00000497677 TRBV30A0A0K0K1B3 111 aa10.14□□□□□ -0.79
CTDSP1-214ENST00000497677 LINC00158P58513 81 aa10.14□□□□□ -0.79
CTDSP1-214ENST00000497677 SPACA4Q8TDM5 124 aa10.14□□□□□ -0.79
CTDSP1-214ENST00000497677 MYCBP2O75592 4640 aa10.13□□□□□ -0.79
CTDSP1-214ENST00000497677 LINC00308Q8TCZ7 52 aa10.13□□□□□ -0.79
CTDSP1-214ENST00000497677 A0A087WYN8 130 aa10.12□□□□□ -0.79
CTDSP1-214ENST00000497677 A0A0B4J2C4 111 aa10.12□□□□□ -0.79
CTDSP1-214ENST00000497677 A4D1N5 150 aa10.12□□□□□ -0.79
CTDSP1-214ENST00000497677 C2orf82Q6UX34 121 aa10.12□□□□□ -0.79
CTDSP1-214ENST00000497677 TAX1BP3O14907 124 aa10.11□□□□□ -0.79
CTDSP1-214ENST00000497677 SYCNQ0VAF6 134 aa10.11□□□□□ -0.79
CTDSP1-214ENST00000497677 MIR7-3HGQ8N6C7 128 aa10.11□□□□□ -0.79
CTDSP1-214ENST00000497677 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
CTDSP1-214ENST00000497677 CAMK2N2Q96S95 79 aa10.11□□□□□ -0.79
CTDSP1-214ENST00000497677 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
CTDSP1-214ENST00000497677 PFN2P35080 140 aa10.1□□□□□ -0.79
CTDSP1-214ENST00000497677 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
CTDSP1-214ENST00000497677 RAB37Q96AX2 223 aa10.1□□□□□ -0.79
CTDSP1-214ENST00000497677 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
CTDSP1-214ENST00000497677 A0A096LNI7 61 aa10.09□□□□□ -0.79
CTDSP1-214ENST00000497677 A0A0U1RRA0 63 aa10.09□□□□□ -0.79
CTDSP1-214ENST00000497677 C9orf118A6NHY6 69 aa10.09□□□□□ -0.79
CTDSP1-214ENST00000497677 RNF151Q2KHN1 245 aa10.09□□□□□ -0.79
CTDSP1-214ENST00000497677 UNQ6190/PRO20217Q6UXQ8 127 aa10.09□□□□□ -0.79
CTDSP1-214ENST00000497677 Q6ZRU5 148 aa10.09□□□□□ -0.79
CTDSP1-214ENST00000497677 DPH3Q96FX2 82 aa10.09□□□□□ -0.79
CTDSP1-214ENST00000497677 CFC1BP0CG36 223 aa10.08□□□□□ -0.8
CTDSP1-214ENST00000497677 CFC1P0CG37 223 aa10.08□□□□□ -0.8
CTDSP1-214ENST00000497677 DAND5Q8N907 189 aa10.08□□□□□ -0.8
CTDSP1-214ENST00000497677 PRO1854Q9UHT4 67 aa10.08□□□□□ -0.8
CTDSP1-214ENST00000497677 IGKV2-24A0A0C4DH68 120 aa10.07□□□□□ -0.8
CTDSP1-214ENST00000497677 RPL37AP61513 92 aaKnown RBP10.06□□□□□ -0.8
CTDSP1-214ENST00000497677 C10orf25Q5T742 122 aa10.06□□□□□ -0.8
CTDSP1-214ENST00000497677 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
CTDSP1-214ENST00000497677 K7ERJ3 54 aa10.05□□□□□ -0.8
CTDSP1-214ENST00000497677 NPC2P61916 151 aa10.05□□□□□ -0.8
CTDSP1-214ENST00000497677 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
CTDSP1-214ENST00000497677 NDUFC2O95298 119 aa10.04□□□□□ -0.8
CTDSP1-214ENST00000497677 SOSTDC1Q6X4U4 206 aa10.04□□□□□ -0.8
CTDSP1-214ENST00000497677 LINC00474Q9P2X8 69 aa10.04□□□□□ -0.8
CTDSP1-214ENST00000497677 HERC1Q15751 4861 aa10.04□□□□□ -0.8
CTDSP1-214ENST00000497677 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
CTDSP1-214ENST00000497677 A0A1B0GV90 55 aa10.03□□□□□ -0.8
CTDSP1-214ENST00000497677 LYRM7Q5U5X0 104 aa10.03□□□□□ -0.8
CTDSP1-214ENST00000497677 PKIGQ9Y2B9 76 aa10.03□□□□□ -0.8
CTDSP1-214ENST00000497677 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
CTDSP1-214ENST00000497677 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
CTDSP1-214ENST00000497677 H3BUT2 72 aa10.01□□□□□ -0.81
CTDSP1-214ENST00000497677 TLX1NBP0CAT3 122 aa10.01□□□□□ -0.81
CTDSP1-214ENST00000497677 FABP2P12104 132 aa10.01□□□□□ -0.81
CTDSP1-214ENST00000497677 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
CTDSP1-214ENST00000497677 DMBT1Q9UGM3 2413 aaPredicted RBP10□□□□□ -0.81
CTDSP1-214ENST00000497677 A0A1W2PPM0 123 aa10□□□□□ -0.81
CTDSP1-214ENST00000497677 EIF4EBP3O60516 100 aaPredicted RBP10□□□□□ -0.81
CTDSP1-214ENST00000497677 GAGE2BQ13066 116 aa10□□□□□ -0.81
CTDSP1-214ENST00000497677 LRP1Q07954 4544 aaKnown RBP9.99□□□□□ -0.81
CTDSP1-214ENST00000497677 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
CTDSP1-214ENST00000497677 TSPAN13O95857 204 aa9.99□□□□□ -0.81
CTDSP1-214ENST00000497677 VAMP3Q15836 100 aa9.99□□□□□ -0.81
CTDSP1-214ENST00000497677 A0A1W2PNN7 141 aa9.98□□□□□ -0.81
CTDSP1-214ENST00000497677 PKHD1L1Q86WI1 4243 aa9.97□□□□□ -0.81
CTDSP1-214ENST00000497677 RPL13AP40429 203 aaKnown RBP9.97□□□□□ -0.81
CTDSP1-214ENST00000497677 Q1RN00 199 aa9.97□□□□□ -0.81
CTDSP1-214ENST00000497677 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
CTDSP1-214ENST00000497677 COX6CP09669 75 aa9.96□□□□□ -0.82
CTDSP1-214ENST00000497677 C7orf33Q8WU49 177 aa9.96□□□□□ -0.82
CTDSP1-214ENST00000497677 TRBV10-2A0A0K0K1G8 114 aa9.95□□□□□ -0.82
CTDSP1-214ENST00000497677 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
CTDSP1-214ENST00000497677 FAT3Q8TDW7 4589 aa9.95□□□□□ -0.82
CTDSP1-214ENST00000497677 TRBV20-1A0A075B6N2 111 aa9.94□□□□□ -0.82
CTDSP1-214ENST00000497677 IGKV2-28A0A075B6P5 120 aa9.94□□□□□ -0.82
CTDSP1-214ENST00000497677 IGKV2D-28P01615 120 aa9.94□□□□□ -0.82
CTDSP1-214ENST00000497677 PSMB2P49721 201 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms