RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 DNAH5Q8TE73 4624 aa13.11□□□□□ -0.31
ACTN4-208ENST00000497637 TSPAN13O95857 204 aa13.11□□□□□ -0.31
ACTN4-208ENST00000497637 GAGE10A6NGK3 116 aa13.09□□□□□ -0.31
ACTN4-208ENST00000497637 K7EP34 96 aa13.09□□□□□ -0.31
ACTN4-208ENST00000497637 GTF2H5Q6ZYL4 71 aa13.09□□□□□ -0.31
ACTN4-208ENST00000497637 IGKV2D-24A0A075B6R9 120 aa13.08□□□□□ -0.32
ACTN4-208ENST00000497637 PFN2P35080 140 aa13.08□□□□□ -0.32
ACTN4-208ENST00000497637 COX17Q14061 63 aa13.08□□□□□ -0.32
ACTN4-208ENST00000497637 NTN5Q8WTR8 489 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-208ENST00000497637 SPCS1Q9Y6A9 102 aa13.08□□□□□ -0.32
ACTN4-208ENST00000497637 GVQW2A0A096LPI5 108 aaPredicted RBP13.06□□□□□ -0.32
ACTN4-208ENST00000497637 C6orf223Q8N319 242 aa13.06□□□□□ -0.32
ACTN4-208ENST00000497637 RMI2Q96E14 147 aa13.06□□□□□ -0.32
ACTN4-208ENST00000497637 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
ACTN4-208ENST00000497637 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
ACTN4-208ENST00000497637 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
ACTN4-208ENST00000497637 F8WDY8 70 aa13.04□□□□□ -0.32
ACTN4-208ENST00000497637 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
ACTN4-208ENST00000497637 Q9HAA7 133 aa13.04□□□□□ -0.32
ACTN4-208ENST00000497637 MYCBP2O75592 4640 aa13.03□□□□□ -0.32
ACTN4-208ENST00000497637 LYRM7Q5U5X0 104 aa13.03□□□□□ -0.32
ACTN4-208ENST00000497637 C15orf56Q8N910 161 aa13.03□□□□□ -0.32
ACTN4-208ENST00000497637 C2orf48Q96LS8 159 aa13.03□□□□□ -0.32
ACTN4-208ENST00000497637 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.33
ACTN4-208ENST00000497637 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.33
ACTN4-208ENST00000497637 SND1-IT1Q9HBX3 110 aa13.02□□□□□ -0.33
ACTN4-208ENST00000497637 FLG2Q5D862 2391 aaPredicted RBP13.01□□□□□ -0.33
ACTN4-208ENST00000497637 RPL13AP40429 203 aaKnown RBP13□□□□□ -0.33
ACTN4-208ENST00000497637 TRBV30A0A0K0K1B3 111 aa12.99□□□□□ -0.33
ACTN4-208ENST00000497637 H7C2G1 150 aa12.99□□□□□ -0.33
ACTN4-208ENST00000497637 Q1RN00 199 aa12.99□□□□□ -0.33
ACTN4-208ENST00000497637 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
ACTN4-208ENST00000497637 C9orf116Q5BN46 136 aaPredicted RBP12.99□□□□□ -0.33
ACTN4-208ENST00000497637 C6orf48Q9UBA6 75 aa12.98□□□□□ -0.33
ACTN4-208ENST00000497637 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
ACTN4-208ENST00000497637 PSMB2P49721 201 aa12.97□□□□□ -0.33
ACTN4-208ENST00000497637 CAMK2N2Q96S95 79 aa12.97□□□□□ -0.33
ACTN4-208ENST00000497637 SCGB1C2P0DMR2 95 aa12.96□□□□□ -0.33
ACTN4-208ENST00000497637 TRBV20-1A0A075B6N2 111 aa12.95□□□□□ -0.34
ACTN4-208ENST00000497637 IGKV2-28A0A075B6P5 120 aa12.95□□□□□ -0.34
ACTN4-208ENST00000497637 NBDYA0A0U1RRE5 68 aa12.95□□□□□ -0.34
ACTN4-208ENST00000497637 IGKV2D-28P01615 120 aa12.95□□□□□ -0.34
ACTN4-208ENST00000497637 NDUFC2O95298 119 aa12.94□□□□□ -0.34
ACTN4-208ENST00000497637 J3QL48 77 aa12.93□□□□□ -0.34
ACTN4-208ENST00000497637 TRIAP1O43715 76 aa12.93□□□□□ -0.34
ACTN4-208ENST00000497637 Q6ZRU5 148 aa12.93□□□□□ -0.34
ACTN4-208ENST00000497637 Q5VSD8 79 aa12.92□□□□□ -0.34
ACTN4-208ENST00000497637 LINC00337Q8N6G1 96 aa12.92□□□□□ -0.34
ACTN4-208ENST00000497637 KRTAP1-5Q9BYS1 174 aa12.92□□□□□ -0.34
ACTN4-208ENST00000497637 USP17L23D6RBM5 183 aa12.91□□□□□ -0.34
ACTN4-208ENST00000497637 TCL1BO95988 128 aa12.91□□□□□ -0.34
ACTN4-208ENST00000497637 COX6CP09669 75 aa12.91□□□□□ -0.34
ACTN4-208ENST00000497637 SYCNQ0VAF6 134 aa12.91□□□□□ -0.34
ACTN4-208ENST00000497637 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
ACTN4-208ENST00000497637 H3BMG7 143 aa12.89□□□□□ -0.35
ACTN4-208ENST00000497637 FAT1Q14517 4588 aa12.89□□□□□ -0.35
ACTN4-208ENST00000497637 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
ACTN4-208ENST00000497637 TTC32Q5I0X7 151 aa12.88□□□□□ -0.35
ACTN4-208ENST00000497637 F8W1H4 67 aa12.86□□□□□ -0.35
ACTN4-208ENST00000497637 RPL28P46779 137 aaKnown RBP12.86□□□□□ -0.35
ACTN4-208ENST00000497637 PRO0461Q9UI25 63 aa12.86□□□□□ -0.35
ACTN4-208ENST00000497637 ATXN8Q156A1 80 aa12.85□□□□□ -0.35
ACTN4-208ENST00000497637 SERTAD4-AS1Q5TG53 156 aa12.85□□□□□ -0.35
ACTN4-208ENST00000497637 CARD19Q96LW7 228 aa12.85□□□□□ -0.35
ACTN4-208ENST00000497637 NDUFC2-KCTD14E9PQ53 114 aa12.84□□□□□ -0.35
ACTN4-208ENST00000497637 VPS13BQ7Z7G8 4022 aa12.83□□□□□ -0.36
ACTN4-208ENST00000497637 Q8NDZ9 215 aa12.83□□□□□ -0.36
ACTN4-208ENST00000497637 OR13C6PQ8NH95 151 aa12.83□□□□□ -0.36
ACTN4-208ENST00000497637 SLPIP03973 132 aa12.82□□□□□ -0.36
ACTN4-208ENST00000497637 TLX1NBP0CAT3 122 aa12.82□□□□□ -0.36
ACTN4-208ENST00000497637 PRR3P79522 188 aaKnown RBP12.82□□□□□ -0.36
ACTN4-208ENST00000497637 SMIM11BQ8TCY0 68 aa12.82□□□□□ -0.36
ACTN4-208ENST00000497637 TRBV10-2A0A0K0K1G8 114 aa12.81□□□□□ -0.36
ACTN4-208ENST00000497637 XGP55808 180 aa12.81□□□□□ -0.36
ACTN4-208ENST00000497637 TMEM126AQ9H061 195 aa12.8□□□□□ -0.36
ACTN4-208ENST00000497637 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
ACTN4-208ENST00000497637 FAM229AH3BQW9 127 aa12.79□□□□□ -0.36
ACTN4-208ENST00000497637 LST1O00453 97 aa12.79□□□□□ -0.36
ACTN4-208ENST00000497637 WFDC2Q14508 124 aa12.79□□□□□ -0.36
ACTN4-208ENST00000497637 LINC01620Q4KN68 170 aa12.79□□□□□ -0.36
ACTN4-208ENST00000497637 PSCAO43653 123 aa12.78□□□□□ -0.36
ACTN4-208ENST00000497637 CLEC2BQ92478 149 aa12.78□□□□□ -0.36
ACTN4-208ENST00000497637 HMCN2Q8NDA2 5059 aa12.77□□□□□ -0.36
ACTN4-208ENST00000497637 NCR3O14931 201 aa12.77□□□□□ -0.37
ACTN4-208ENST00000497637 LECT2O14960 151 aa12.77□□□□□ -0.37
ACTN4-208ENST00000497637 Q6ZRP5 223 aa12.77□□□□□ -0.37
ACTN4-208ENST00000497637 H0YGX0 51 aa12.76□□□□□ -0.37
ACTN4-208ENST00000497637 M0QXV9 152 aa12.76□□□□□ -0.37
ACTN4-208ENST00000497637 SMCPP49901 116 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-208ENST00000497637 GAGE2EQ4V326 116 aa12.76□□□□□ -0.37
ACTN4-208ENST00000497637 C14orf177Q52M58 125 aa12.76□□□□□ -0.37
ACTN4-208ENST00000497637 GAGE2DQ9UEU5 116 aa12.76□□□□□ -0.37
ACTN4-208ENST00000497637 VPREB1P12018 145 aa12.75□□□□□ -0.37
ACTN4-208ENST00000497637 LINC01600Q96MT4 127 aa12.75□□□□□ -0.37
ACTN4-208ENST00000497637 C9JAW5 83 aa12.74□□□□□ -0.37
ACTN4-208ENST00000497637 S100A7L2Q5SY68 101 aa12.74□□□□□ -0.37
ACTN4-208ENST00000497637 MTURNQ8N3F0 131 aa12.74□□□□□ -0.37
ACTN4-208ENST00000497637 IGLV6-57P01721 117 aa12.73□□□□□ -0.37
ACTN4-208ENST00000497637 CNBPP62633 177 aaKnown RBP12.73□□□□□ -0.37
ACTN4-208ENST00000497637 Q6ZRN7 208 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms