RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
GGPS1-208ENST00000497327 M0R143 59 aa3.5□□□□□ -1.85
GGPS1-208ENST00000497327 TIMM17BO60830 172 aa3.5□□□□□ -1.85
GGPS1-208ENST00000497327 HSD52Q0P140 79 aa3.5□□□□□ -1.85
GGPS1-208ENST00000497327 ADAMTSL4-AS1Q5T5F5 129 aa3.5□□□□□ -1.85
GGPS1-208ENST00000497327 Q8IZM0 81 aa3.5□□□□□ -1.85
GGPS1-208ENST00000497327 HINT1P49773 126 aaPredicted RBP3.49□□□□□ -1.85
GGPS1-208ENST00000497327 HERV-K104P63124 156 aa3.49□□□□□ -1.85
GGPS1-208ENST00000497327 SCGB1D4Q6XE38 83 aa3.49□□□□□ -1.85
GGPS1-208ENST00000497327 GVQW2A0A096LPI5 108 aaPredicted RBP3.48□□□□□ -1.85
GGPS1-208ENST00000497327 NBDYA0A0U1RRE5 68 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 F8WDY8 70 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 APOMO95445 188 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 CXCL5P42830 114 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 FXYD2P54710 66 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 SPAG11BQ08648 103 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 C6orf226Q5I0X4 101 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 CASC10Q5T4H9 136 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 SFTA2Q6UW10 78 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 C2orf82Q6UX34 121 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 UBE2DNLQ8IWF7 75 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 CEND1Q8N111 149 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 C15orf56Q8N910 161 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 ORAOV1Q8WV07 137 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 SPANXCQ9NY87 97 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 TOMM7Q9P0U1 55 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 DNAH7Q8WXX0 4024 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 STARD9Q9P2P6 4700 aa3.48□□□□□ -1.85
GGPS1-208ENST00000497327 TGP01266 2768 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 IGKV2D-24A0A075B6R9 120 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 A0A1B0GWB2 263 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 TMEM238C9JI98 176 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 C3orf84H3BNL1 204 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
GGPS1-208ENST00000497327 UNQ6190/PRO20217Q6UXQ8 127 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 Q6ZR54 194 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
GGPS1-208ENST00000497327 Q6ZVH6 145 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 C6orf223Q8N319 242 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 RMI2Q96E14 147 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 HIST1H4GQ99525 98 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 Q9HAA7 133 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 TENM2Q9NT68 2774 aa3.47□□□□□ -1.85
GGPS1-208ENST00000497327 LOC107984156A0A0G2JMH3 177 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 SMIM13P0DJ93 91 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 IFITM1P13164 125 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 CKS1BP61024 79 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 CIRBPQ14011 172 aaKnown RBP3.46□□□□□ -1.86
GGPS1-208ENST00000497327 TTC32Q5I0X7 151 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 SOSTDC1Q6X4U4 206 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 MUSTN1Q8IVN3 82 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 ARL17AQ8IVW1 177 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 LINC00526Q96FQ7 95 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 C2orf48Q96LS8 159 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 ERG28Q9UKR5 140 aa3.46□□□□□ -1.86
GGPS1-208ENST00000497327 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 COX17Q14061 63 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 WFDC2Q14508 124 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 BATFQ16520 125 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 COL5A1-AS1Q5SY13 56 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 MIR7-3HGQ8N6C7 128 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 DAND5Q8N907 189 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 LINC00308Q8TCZ7 52 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 C6orf48Q9UBA6 75 aa3.45□□□□□ -1.86
GGPS1-208ENST00000497327 CSMD3Q7Z407 3707 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 LRCOL1A6NCL2 159 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 A6NDN8 102 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 LINC00158P58513 81 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 C9orf116Q5BN46 136 aaPredicted RBP3.44□□□□□ -1.86
GGPS1-208ENST00000497327 Q6ZRU5 148 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 CAMK2N2Q96S95 79 aa3.44□□□□□ -1.86
GGPS1-208ENST00000497327 ALMS1Q8TCU4 4167 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.43□□□□□ -1.86
GGPS1-208ENST00000497327 A0A0B4J2C4 111 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 K7ERJ3 54 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 CDK2AP2O75956 126 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 TLX1NBP0CAT3 122 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 PFN2P35080 140 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 SYCNQ0VAF6 134 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 NHP2Q9NX24 153 aaKnown RBP3.43□□□□□ -1.86
GGPS1-208ENST00000497327 DNAH6Q9C0G6 4158 aa3.43□□□□□ -1.86
GGPS1-208ENST00000497327 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 M0R2N4 97 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 LECT2O14960 151 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 LY6G6CO95867 125 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 NPC2P61916 151 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 CNBPP62633 177 aaKnown RBP3.42□□□□□ -1.86
GGPS1-208ENST00000497327 Q8NDZ9 215 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 SND1-IT1Q9HBX3 110 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 DNAH2Q9P225 4427 aa3.42□□□□□ -1.86
GGPS1-208ENST00000497327 DNAH17Q9UFH2 4485 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 289.7 ms