RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 GIG44P09565 113 aaPredicted RBP8.78□□□□□ -1
VEGFA-215ENST00000497139 DSCR9P59020 149 aa8.78□□□□□ -1
VEGFA-215ENST00000497139 ELOF1P60002 83 aaKnown RBP8.78□□□□□ -1
VEGFA-215ENST00000497139 HIGD2AQ9BW72 106 aa8.78□□□□□ -1
VEGFA-215ENST00000497139 CELA1Q9UNI1 258 aa8.78□□□□□ -1
VEGFA-215ENST00000497139 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
VEGFA-215ENST00000497139 LINC00269Q8N2A0 174 aa8.77□□□□□ -1.01
VEGFA-215ENST00000497139 LINC01356Q8N9X3 169 aa8.77□□□□□ -1.01
VEGFA-215ENST00000497139 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
VEGFA-215ENST00000497139 CENPEQ02224 2701 aa8.77□□□□□ -1.01
VEGFA-215ENST00000497139 A0A1B0GW54 56 aa8.76□□□□□ -1.01
VEGFA-215ENST00000497139 ZNF73O43830 326 aaPredicted RBP8.75□□□□□ -1.01
VEGFA-215ENST00000497139 CELSR1Q9NYQ6 3014 aa8.75□□□□□ -1.01
VEGFA-215ENST00000497139 CRYBG3Q68DQ2 2970 aa8.75□□□□□ -1.01
VEGFA-215ENST00000497139 Q6ZRP5 223 aa8.75□□□□□ -1.01
VEGFA-215ENST00000497139 CREBBPQ92793 2442 aa8.75□□□□□ -1.01
VEGFA-215ENST00000497139 GVQW2A0A096LPI5 108 aaPredicted RBP8.74□□□□□ -1.01
VEGFA-215ENST00000497139 CD164Q04900 197 aa8.74□□□□□ -1.01
VEGFA-215ENST00000497139 GYPEP15421 78 aa8.74□□□□□ -1.01
VEGFA-215ENST00000497139 DAD1P61803 113 aa8.74□□□□□ -1.01
VEGFA-215ENST00000497139 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
VEGFA-215ENST00000497139 CSNK1G2-AS1Q8NCQ2 148 aa8.74□□□□□ -1.01
VEGFA-215ENST00000497139 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
VEGFA-215ENST00000497139 FSHBP01225 129 aa8.73□□□□□ -1.01
VEGFA-215ENST00000497139 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
VEGFA-215ENST00000497139 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
VEGFA-215ENST00000497139 Q8N9L7 120 aa8.73□□□□□ -1.01
VEGFA-215ENST00000497139 CYP4F30PQ9H0H9 118 aa8.73□□□□□ -1.01
VEGFA-215ENST00000497139 MAP1AP78559 2803 aaPredicted RBP8.73□□□□□ -1.01
VEGFA-215ENST00000497139 C1orf64Q8NEQ6 169 aa8.72□□□□□ -1.01
VEGFA-215ENST00000497139 ZCCHC13Q8WW36 166 aaKnown RBP8.72□□□□□ -1.01
VEGFA-215ENST00000497139 SPAG11BQ08648 103 aa8.71□□□□□ -1.01
VEGFA-215ENST00000497139 REG3AQ06141 175 aa8.71□□□□□ -1.02
VEGFA-215ENST00000497139 LYRM9A8MSI8 78 aa8.7□□□□□ -1.02
VEGFA-215ENST00000497139 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
VEGFA-215ENST00000497139 POLQO75417 2590 aa8.7□□□□□ -1.02
VEGFA-215ENST00000497139 C10orf25Q5T742 122 aa8.69□□□□□ -1.02
VEGFA-215ENST00000497139 PRO0255Q9UI72 69 aa8.69□□□□□ -1.02
VEGFA-215ENST00000497139 UBR5O95071 2799 aaPredicted RBP8.69□□□□□ -1.02
VEGFA-215ENST00000497139 USP9YO00507 2555 aaPredicted RBP8.68□□□□□ -1.02
VEGFA-215ENST00000497139 KMT2BQ9UMN6 2715 aaPredicted RBP8.68□□□□□ -1.02
VEGFA-215ENST00000497139 CYSRT1A8MQ03 144 aa8.68□□□□□ -1.02
VEGFA-215ENST00000497139 PTPN13Q12923 2485 aa8.67□□□□□ -1.02
VEGFA-215ENST00000497139 TRAV22A0A0B4J277 110 aa8.67□□□□□ -1.02
VEGFA-215ENST00000497139 SMIM29Q86T20 159 aa8.67□□□□□ -1.02
VEGFA-215ENST00000497139 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
VEGFA-215ENST00000497139 ABCA12Q86UK0 2595 aa8.67□□□□□ -1.02
VEGFA-215ENST00000497139 ANGP03950 147 aaKnown RBP8.67□□□□□ -1.02
VEGFA-215ENST00000497139 VPS13CQ709C8 3753 aa8.65□□□□□ -1.02
VEGFA-215ENST00000497139 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
VEGFA-215ENST00000497139 ETDCA0A1B0GVM5 59 aa8.65□□□□□ -1.02
VEGFA-215ENST00000497139 NDUFB1O75438 58 aa8.65□□□□□ -1.02
VEGFA-215ENST00000497139 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
VEGFA-215ENST00000497139 C2CD3Q4AC94 2353 aa8.65□□□□□ -1.02
VEGFA-215ENST00000497139 HELZ2Q9BYK8 2649 aaKnown RBP8.65□□□□□ -1.03
VEGFA-215ENST00000497139 M0R378 163 aa8.65□□□□□ -1.03
VEGFA-215ENST00000497139 DEFB130BP0DP73 79 aa8.64□□□□□ -1.03
VEGFA-215ENST00000497139 DEFB130AP0DP74 79 aa8.64□□□□□ -1.03
VEGFA-215ENST00000497139 C19orf73Q9NVV2 129 aa8.64□□□□□ -1.03
VEGFA-215ENST00000497139 CELSR2Q9HCU4 2923 aa8.64□□□□□ -1.03
VEGFA-215ENST00000497139 IGLV5-48A0A075B6I7 105 aa8.63□□□□□ -1.03
VEGFA-215ENST00000497139 PSCAO43653 123 aa8.63□□□□□ -1.03
VEGFA-215ENST00000497139 UBE2BP63146 152 aa8.63□□□□□ -1.03
VEGFA-215ENST00000497139 CSMD2Q7Z408 3487 aa8.63□□□□□ -1.03
VEGFA-215ENST00000497139 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
VEGFA-215ENST00000497139 KLK12Q9UKR0 248 aa8.63□□□□□ -1.03
VEGFA-215ENST00000497139 VPREB1P12018 145 aa8.62□□□□□ -1.03
VEGFA-215ENST00000497139 TENM4Q6N022 2769 aa8.62□□□□□ -1.03
VEGFA-215ENST00000497139 PSPHP1O15172 72 aa8.62□□□□□ -1.03
VEGFA-215ENST00000497139 ANKRD17O75179 2603 aaKnown RBP8.62□□□□□ -1.03
VEGFA-215ENST00000497139 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
VEGFA-215ENST00000497139 MAPK1IP1LQ8NDC0 245 aa8.61□□□□□ -1.03
VEGFA-215ENST00000497139 C6orf48Q9UBA6 75 aa8.61□□□□□ -1.03
VEGFA-215ENST00000497139 CR1P17927 2039 aa8.61□□□□□ -1.03
VEGFA-215ENST00000497139 LRCOL1A6NCL2 159 aa8.6□□□□□ -1.03
VEGFA-215ENST00000497139 WNK1Q9H4A3 2382 aa8.6□□□□□ -1.03
VEGFA-215ENST00000497139 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
VEGFA-215ENST00000497139 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
VEGFA-215ENST00000497139 FBN2P35556 2912 aa8.59□□□□□ -1.03
VEGFA-215ENST00000497139 XAGE1AQ9HD64 81 aa8.59□□□□□ -1.03
VEGFA-215ENST00000497139 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.59□□□□□ -1.03
VEGFA-215ENST00000497139 IGLV1-51P01701 117 aa8.59□□□□□ -1.03
VEGFA-215ENST00000497139 UBE2AP49459 152 aa8.59□□□□□ -1.03
VEGFA-215ENST00000497139 WFDC10AQ9H1F0 79 aa8.59□□□□□ -1.03
VEGFA-215ENST00000497139 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
VEGFA-215ENST00000497139 FASNP49327 2511 aaKnown RBP8.58□□□□□ -1.04
VEGFA-215ENST00000497139 A0A096LPF7 62 aa8.58□□□□□ -1.04
VEGFA-215ENST00000497139 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
VEGFA-215ENST00000497139 NOTCH3Q9UM47 2321 aa8.58□□□□□ -1.04
VEGFA-215ENST00000497139 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
VEGFA-215ENST00000497139 NAV2Q8IVL1 2488 aa8.57□□□□□ -1.04
VEGFA-215ENST00000497139 EGFEM1PQ0D2K5 195 aa8.56□□□□□ -1.04
VEGFA-215ENST00000497139 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
VEGFA-215ENST00000497139 A8MUN3 132 aa8.56□□□□□ -1.04
VEGFA-215ENST00000497139 DEFB113Q30KQ7 82 aa8.56□□□□□ -1.04
VEGFA-215ENST00000497139 Q5VV11 94 aa8.56□□□□□ -1.04
VEGFA-215ENST00000497139 CCDC168Q8NDH2 2452 aa8.55□□□□□ -1.04
VEGFA-215ENST00000497139 NBPF19A0A087WUL8 3843 aa8.54□□□□□ -1.04
VEGFA-215ENST00000497139 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
VEGFA-215ENST00000497139 Q8N377 158 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms