RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CHD9Q3L8U1 2897 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
VPS26A-208ENST00000497022 RALGAPBQ86X10 1494 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 KIAA0556O60303 1618 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 CCDC180Q9P1Z9 1646 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 APOBP04114 4563 aaKnown RBP0.35□□□□□ -2.35
VPS26A-208ENST00000497022 ABCC1P33527 1531 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 LMTK2Q8IWU2 1503 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 PLCH1Q4KWH8 1693 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 MYMXA0A1B0GTQ4 84 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 PDCD5O14737 125 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 UQCR11O14957 56 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 BCE1O60756 84 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 DEFA5Q01523 94 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 TMEM170BQ5T4T1 132 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 LELP1Q5T871 98 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 HEPN1Q6WQI6 88 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 C6orf201Q7Z4U5 140 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 LINC00643Q86TS7 51 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 SMIM11BQ8TCY0 68 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 HILPDAQ9Y5L2 63 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 R4GMQ9 66 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 ANKARQ7Z5J8 1434 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 QSER1Q2KHR3 1735 aa0.35□□□□□ -2.35
VPS26A-208ENST00000497022 COL14A1Q05707 1796 aaKnown RBP0.34□□□□□ -2.35
VPS26A-208ENST00000497022 EFCAB5A4FU69 1503 aa0.34□□□□□ -2.35
VPS26A-208ENST00000497022 ABCC2Q92887 1545 aa0.34□□□□□ -2.35
VPS26A-208ENST00000497022 MROH2AA6NES4 1674 aa0.34□□□□□ -2.35
VPS26A-208ENST00000497022 FAM208BQ5VWN6 2430 aa0.34□□□□□ -2.35
VPS26A-208ENST00000497022 PKHD1L1Q86WI1 4243 aa0.34□□□□□ -2.35
VPS26A-208ENST00000497022 H0Y9P7 68 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 SNRPFP62306 86 aaKnown RBP0.34□□□□□ -2.36
VPS26A-208ENST00000497022 DEFB112Q30KQ8 113 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 Q6JHZ5 121 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 S100A13Q99584 98 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 LINC00846Q9NV44 126 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 SACSQ9NZJ4 4579 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 RABAC1Q9UI14 185 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 HECTD4Q9Y4D8 3996 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 PREX2Q70Z35 1606 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 PRXQ9BXM0 1461 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 LYSTQ99698 3801 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 BDP1A6H8Y1 2624 aa0.34□□□□□ -2.36
VPS26A-208ENST00000497022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.33□□□□□ -2.36
VPS26A-208ENST00000497022 ZNF292O60281 2723 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 LOC285095A0A1B0GVY8 99 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 A0A1B0GWA3 101 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 MGPP08493 103 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 IFI6P09912 130 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 KRTAP2-3P0C7H8 128 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 PLGLAQ15195 96 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 ADIRFQ15847 76 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 TMEM263Q8WUH6 116 aaKnown RBP0.33□□□□□ -2.36
VPS26A-208ENST00000497022 KRTAP2-4Q9BYR9 128 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 KRTAP2-1Q9BYU5 128 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 SMCO4Q9NRQ5 59 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 RNF17Q9BXT8 1623 aaKnown RBP0.33□□□□□ -2.36
VPS26A-208ENST00000497022 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 NKTRP30414 1462 aaKnown RBP0.33□□□□□ -2.36
VPS26A-208ENST00000497022 TSC2P49815 1807 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 CACNA1HO95180 2353 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 LPAP08519 4548 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 DUOX2Q9NRD8 1548 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 A0A0G2JMZ2 1700 aa0.33□□□□□ -2.36
VPS26A-208ENST00000497022 TTC28Q96AY4 2481 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 TIAM1Q13009 1591 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 PKHD1P08F94 4074 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 TRAV21A0A0B4J279 112 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 LCE6AA0A183 80 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 LEPROTL1O95214 131 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 SSBP3-AS1Q7Z2R9 100 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 UBR3Q6ZT12 1888 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 DNAH9Q9NYC9 4486 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 DNAH3Q8TD57 4116 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 CHD6Q8TD26 2715 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 TJP1Q07157 1748 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 HSPG2P98160 4391 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 ERCC6L2Q5T890 1561 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 GVINP1Q7Z2Y8 2422 aa0.32□□□□□ -2.36
VPS26A-208ENST00000497022 DNAH2Q9P225 4427 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 CELSR2Q9HCU4 2923 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 HFM1A2PYH4 1435 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 NHSQ6T4R5 1651 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 PREX1Q8TCU6 1659 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 FXYD6-FXYD2A0A087WZ82 144 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 A0A1B0GU69 56 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 SMIM31A0A1B0GVY4 71 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 CEBPZOSA8MTT3 80 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 D6R8Y8 96 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 PRH1P02810 166 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 SMIM13P0DJ93 91 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 GCHFRP30047 84 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 COX17Q14061 63 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 MUSTN1Q8IVN3 82 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 CNFNQ9BYD5 112 aa0.31□□□□□ -2.36
VPS26A-208ENST00000497022 URB2Q14146 1524 aaKnown RBP0.31□□□□□ -2.36
VPS26A-208ENST00000497022 URB1O60287 2271 aaKnown RBP0.31□□□□□ -2.36
VPS26A-208ENST00000497022 AKAP13Q12802 2813 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms