RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 C1orf137Q5JT78 98 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 C12orf73Q69YU5 71 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 C2orf82Q6UX34 121 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 C5orf38Q86SI9 138 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 TMEM141Q96I45 108 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 TMEM106BQ9NUM4 274 aa1.93□□□□□ -2.1
EXOSC3-208ENST00000496910 SLC25A6P12236 298 aa1.92□□□□□ -2.1
EXOSC3-208ENST00000496910 Q1T7F1 81 aa1.92□□□□□ -2.1
EXOSC3-208ENST00000496910 TRAV2A0A0B4J234 112 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 SDHAF1A6NFY7 115 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 IGKCP01834 107 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 IL7P13232 177 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 DCDP81605 110 aaKnown RBP1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 ELOBQ15370 118 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 SLC48A1Q6P1K1 146 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 NPVFQ9HCQ7 196 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 AP4S1Q9Y587 144 aa1.91□□□□□ -2.1
EXOSC3-208ENST00000496910 CXorf51AA0A1B0GTR3 108 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 UBE2L5PA0A1B0GUS4 154 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 H3BQF6 201 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 IGLV6-57P01721 117 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 LINC00032P0C843 101 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 CBLN1P23435 193 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 POLR2JP52435 117 aaKnown RBP1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 UBE2L3P68036 154 aaKnown RBP1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 Q0VG73 95 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 RHOHQ15669 191 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 IQCJQ1A5X6 159 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 C9orf116Q5BN46 136 aaPredicted RBP1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 PRR9Q5T870 116 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 ATG5Q9H1Y0 275 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 MED12LQ86YW9 2145 aa1.9□□□□□ -2.11
EXOSC3-208ENST00000496910 H3BQ15 152 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 GNGT2O14610 69 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 SSSCA1O60232 199 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 IGHV3-33P01772 117 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 CSAG1Q6PB30 78 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 COMMD6Q7Z4G1 85 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 OR10AG1Q8NH19 301 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 LCN9Q8WX39 176 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 PATE1Q8WXA2 126 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 LINC00052Q96N35 136 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
EXOSC3-208ENST00000496910 TRBV6-8A0A0A6YYG3 113 aa1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 hADV29S1A0JD25 119 aa1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 SMR3BP02814 79 aaPredicted RBP1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 CCKP06307 115 aa1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 ATP5EP56381 51 aaPredicted RBP1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 SPTSSBQ8NFR3 76 aa1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 ZNF431Q8TF32 576 aaPredicted RBP1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 C10orf82Q8WW14 230 aa1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 PPDPFLQ8WWR9 84 aa1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
EXOSC3-208ENST00000496910 UQCRHLA0A096LP55 91 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 TMEM30CPA0ZSE6 113 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 F8W1H4 67 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 UQCRHP07919 91 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 RPL7L1Q6DKI1 246 aaKnown RBP1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 UNQ5815/PRO19632Q6UWF5 114 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 WFDC9Q8NEX5 89 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 DEFB104AQ8WTQ1 72 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 LIMD2Q9BT23 127 aa1.87□□□□□ -2.11
EXOSC3-208ENST00000496910 HCG22E2RYF7 251 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 IGFL1Q6UW32 110 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 IFI27L1Q96BM0 104 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 TVP23CQ96ET8 276 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 ODF3Q96PU9 254 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 PMCHL2Q9BQD1 86 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 MRPL35Q9NZE8 188 aaKnown RBP1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 ORMDL1Q9P0S3 153 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 PRO0461Q9UI25 63 aa1.86□□□□□ -2.11
EXOSC3-208ENST00000496910 TRBV10-3A0A0K0K1G6 114 aa1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 A6NIN4 97 aa1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 H3BRN7 92 aa1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 NUPR1O60356 82 aa1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 RNASE3P12724 160 aaKnown RBP1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 BET1LQ9NYM9 111 aa1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 C22orf24Q9Y442 160 aa1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
EXOSC3-208ENST00000496910 ANKRD36A6QL64 1941 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 IGKV3-7A0A075B6H7 116 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 TRAV13-2A0A0B4J235 113 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 PIGBOS1A0A0B4J2F0 54 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 IGKV2-24A0A0C4DH68 120 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 NUPR2A6NF83 97 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 MRPS14O60783 128 aaKnown RBP1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 NMBP08949 121 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 TDRG1Q3Y452 100 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 FAM74A1Q5RGS3 127 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 FAM213BQ8TBF2 198 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 C4orf3Q8WVX3 66 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 TSLPQ969D9 159 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 CYTL1Q9NRR1 136 aa1.84□□□□□ -2.11
EXOSC3-208ENST00000496910 TRAV12-3A0A0B4J271 114 aa1.83□□□□□ -2.12
EXOSC3-208ENST00000496910 TRGV4A0A0C4DH28 118 aa1.83□□□□□ -2.12
EXOSC3-208ENST00000496910 A0A0J9YY99 117 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms