RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ANAPC11Q9NYG5 84 aa8.41□□□□□ -1.06
VTI1A-209ENST00000496445 COX17Q14061 63 aa8.4□□□□□ -1.06
VTI1A-209ENST00000496445 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.06
VTI1A-209ENST00000496445 TMEM170BQ5T4T1 132 aa8.4□□□□□ -1.06
VTI1A-209ENST00000496445 TMEM238C9JI98 176 aa8.39□□□□□ -1.07
VTI1A-209ENST00000496445 CRYGAP11844 174 aa8.39□□□□□ -1.07
VTI1A-209ENST00000496445 UBE2AP49459 152 aa8.39□□□□□ -1.07
VTI1A-209ENST00000496445 PRR4Q16378 134 aa8.39□□□□□ -1.07
VTI1A-209ENST00000496445 NDUFA5Q16718 116 aa8.39□□□□□ -1.07
VTI1A-209ENST00000496445 CHTOPQ9Y3Y2 248 aaKnown RBP8.39□□□□□ -1.07
VTI1A-209ENST00000496445 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
VTI1A-209ENST00000496445 PRLHP81277 87 aa8.38□□□□□ -1.07
VTI1A-209ENST00000496445 TMEM126AQ9H061 195 aa8.38□□□□□ -1.07
VTI1A-209ENST00000496445 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
VTI1A-209ENST00000496445 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
VTI1A-209ENST00000496445 TSPAN13O95857 204 aa8.37□□□□□ -1.07
VTI1A-209ENST00000496445 SFTA2Q6UW10 78 aa8.37□□□□□ -1.07
VTI1A-209ENST00000496445 TYMSOSQ8TAI1 123 aa8.37□□□□□ -1.07
VTI1A-209ENST00000496445 CHCHD1Q96BP2 118 aaKnown RBP8.37□□□□□ -1.07
VTI1A-209ENST00000496445 M0R378 163 aa8.36□□□□□ -1.07
VTI1A-209ENST00000496445 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
VTI1A-209ENST00000496445 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
VTI1A-209ENST00000496445 FAM19A1Q7Z5A9 133 aa8.35□□□□□ -1.07
VTI1A-209ENST00000496445 FAM229BQ4G0N7 80 aa8.34□□□□□ -1.07
VTI1A-209ENST00000496445 CBLN2Q8IUK8 224 aa8.34□□□□□ -1.07
VTI1A-209ENST00000496445 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
VTI1A-209ENST00000496445 LINC00158P58513 81 aa8.33□□□□□ -1.08
VTI1A-209ENST00000496445 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
VTI1A-209ENST00000496445 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
VTI1A-209ENST00000496445 LINC00310P59036 64 aa8.3□□□□□ -1.08
VTI1A-209ENST00000496445 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
VTI1A-209ENST00000496445 HSBP1O75506 76 aa8.29□□□□□ -1.08
VTI1A-209ENST00000496445 LINC00304Q8N9R0 145 aa8.29□□□□□ -1.08
VTI1A-209ENST00000496445 TRGC2P03986 189 aa8.28□□□□□ -1.08
VTI1A-209ENST00000496445 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
VTI1A-209ENST00000496445 IGKV2D-26A0A0A0MRZ7 120 aa8.27□□□□□ -1.09
VTI1A-209ENST00000496445 H0Y8G0 127 aa8.27□□□□□ -1.09
VTI1A-209ENST00000496445 MEIG1Q5JSS6 88 aa8.27□□□□□ -1.09
VTI1A-209ENST00000496445 C3orf22Q8N5N4 141 aa8.27□□□□□ -1.09
VTI1A-209ENST00000496445 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
VTI1A-209ENST00000496445 RETNLBQ9BQ08 111 aa8.27□□□□□ -1.09
VTI1A-209ENST00000496445 HIGD2AQ9BW72 106 aa8.27□□□□□ -1.09
VTI1A-209ENST00000496445 NCR3O14931 201 aa8.26□□□□□ -1.09
VTI1A-209ENST00000496445 SERF1AO75920 110 aa8.26□□□□□ -1.09
VTI1A-209ENST00000496445 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
VTI1A-209ENST00000496445 NDUFA12Q9UI09 145 aa8.26□□□□□ -1.09
VTI1A-209ENST00000496445 PRYO14603 147 aa8.25□□□□□ -1.09
VTI1A-209ENST00000496445 HERV-K104P63124 156 aa8.25□□□□□ -1.09
VTI1A-209ENST00000496445 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
VTI1A-209ENST00000496445 LEPROTL1O95214 131 aa8.24□□□□□ -1.09
VTI1A-209ENST00000496445 SPRR1AP35321 89 aa8.24□□□□□ -1.09
VTI1A-209ENST00000496445 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
VTI1A-209ENST00000496445 MYMXA0A1B0GTQ4 84 aa8.23□□□□□ -1.09
VTI1A-209ENST00000496445 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-209ENST00000496445 ATP6V1G1O75348 118 aa8.23□□□□□ -1.09
VTI1A-209ENST00000496445 KCNQ1DNQ9H478 68 aa8.23□□□□□ -1.09
VTI1A-209ENST00000496445 LEPROTO15243 131 aa8.22□□□□□ -1.09
VTI1A-209ENST00000496445 LINC00337Q8N6G1 96 aa8.22□□□□□ -1.09
VTI1A-209ENST00000496445 DAND5Q8N907 189 aa8.22□□□□□ -1.09
VTI1A-209ENST00000496445 TRBV10-3A0A0K0K1G6 114 aa8.21□□□□□ -1.1
VTI1A-209ENST00000496445 PLNP26678 52 aa8.21□□□□□ -1.1
VTI1A-209ENST00000496445 LINC00587B1AMM8 73 aa8.2□□□□□ -1.1
VTI1A-209ENST00000496445 SMCR5Q8TEV8 140 aa8.2□□□□□ -1.1
VTI1A-209ENST00000496445 PMCHL2Q9BQD1 86 aa8.2□□□□□ -1.1
VTI1A-209ENST00000496445 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 COLCA2A8K830 154 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 FABP4P15090 132 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 CTAG1AP78358 180 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 SLC7A5P1Q8MH63 180 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 MAP1LC3CQ9BXW4 147 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 HSPB8Q9UJY1 196 aa8.19□□□□□ -1.1
VTI1A-209ENST00000496445 ZNF706Q9Y5V0 76 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-209ENST00000496445 J3QQQ9 107 aa8.18□□□□□ -1.1
VTI1A-209ENST00000496445 DPM2O94777 84 aa8.18□□□□□ -1.1
VTI1A-209ENST00000496445 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
VTI1A-209ENST00000496445 IGKCP01834 107 aa8.17□□□□□ -1.1
VTI1A-209ENST00000496445 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
VTI1A-209ENST00000496445 B5MCH6 92 aa8.16□□□□□ -1.1
VTI1A-209ENST00000496445 NMUP48645 174 aa8.16□□□□□ -1.1
VTI1A-209ENST00000496445 HERVK_113P61574 105 aa8.16□□□□□ -1.1
VTI1A-209ENST00000496445 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
VTI1A-209ENST00000496445 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
VTI1A-209ENST00000496445 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
VTI1A-209ENST00000496445 DDTP30046 118 aa8.15□□□□□ -1.1
VTI1A-209ENST00000496445 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
VTI1A-209ENST00000496445 Q8NBF4 154 aa8.15□□□□□ -1.1
VTI1A-209ENST00000496445 ERC2-IT1O76042 136 aa8.14□□□□□ -1.11
VTI1A-209ENST00000496445 LGALS3P17931 250 aaKnown RBP8.14□□□□□ -1.11
VTI1A-209ENST00000496445 SPAG11AQ6PDA7 123 aa8.14□□□□□ -1.11
VTI1A-209ENST00000496445 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
VTI1A-209ENST00000496445 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
VTI1A-209ENST00000496445 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-209ENST00000496445 Q9BRP9 147 aa8.13□□□□□ -1.11
VTI1A-209ENST00000496445 A0A0J9YXY3 114 aa8.12□□□□□ -1.11
VTI1A-209ENST00000496445 IGLV6-57P01721 117 aa8.12□□□□□ -1.11
VTI1A-209ENST00000496445 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
VTI1A-209ENST00000496445 E9PLD3 99 aa8.11□□□□□ -1.11
VTI1A-209ENST00000496445 NDUFC2O95298 119 aa8.11□□□□□ -1.11
VTI1A-209ENST00000496445 NPC2P61916 151 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms