RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	MAP1LC3C	Q9BXW4	147 aa		4.58	□□□□□ -1.68
NVL-223	ENST00000496393		F8WDY8	70 aa		4.57	□□□□□ -1.68
NVL-223	ENST00000496393		Q6ZN92	141 aa		4.57	□□□□□ -1.68
NVL-223	ENST00000496393	FAM19A2	Q8N3H0	131 aa		4.57	□□□□□ -1.68
NVL-223	ENST00000496393	FAM104A	Q969W3	186 aa		4.57	□□□□□ -1.68
NVL-223	ENST00000496393	KIR2DL4	Q99706	377 aa		4.57	□□□□□ -1.68
NVL-223	ENST00000496393	LAMTOR2	Q9Y2Q5	125 aa		4.57	□□□□□ -1.68
NVL-223	ENST00000496393	FSIP2	Q5CZC0	6907 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	NDUFC2-KCTD14	E9PQ53	114 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	SYS1-DBNDD2	H3BUS1	97 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	DLEU1	O43261	78 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	PPBP	P02775	128 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	CRYGA	P11844	174 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	KIAA0087	Q14695	138 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	LINC00242	Q5T6M2	205 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	FA2H	Q7L5A8	372 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	TIMM21	Q9BVV7	248 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	XAGE1A	Q9HD64	81 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	CRCT1	Q9UGL9	99 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	C22orf24	Q9Y442	160 aa		4.56	□□□□□ -1.68
NVL-223	ENST00000496393	IGLV7-46	A0A075B6I9	117 aa		4.55	□□□□□ -1.68
NVL-223	ENST00000496393	TRBV30	A0A0K0K1B3	111 aa		4.55	□□□□□ -1.68
NVL-223	ENST00000496393	TPRXL	Q17RH7	258 aa		4.55	□□□□□ -1.68
NVL-223	ENST00000496393	KRTAP13-2	Q52LG2	175 aa		4.55	□□□□□ -1.68
NVL-223	ENST00000496393	RPL28	P46779	137 aa	Known RBP	4.54	□□□□□ -1.68
NVL-223	ENST00000496393	MRPL51	Q4U2R6	128 aa	Known RBP	4.54	□□□□□ -1.68
NVL-223	ENST00000496393	FAM104B	Q5XKR9	115 aa		4.54	□□□□□ -1.68
NVL-223	ENST00000496393	SLC25A34	Q6PIV7	304 aa		4.54	□□□□□ -1.68
NVL-223	ENST00000496393	LINC00173	Q6ZV60	143 aa		4.54	□□□□□ -1.68
NVL-223	ENST00000496393	ORMDL3	Q8N138	153 aa		4.54	□□□□□ -1.68
NVL-223	ENST00000496393	LINC00304	Q8N9R0	145 aa		4.54	□□□□□ -1.68
NVL-223	ENST00000496393	URB1-AS1	Q96HZ7	61 aa		4.54	□□□□□ -1.68
NVL-223	ENST00000496393	RPL37AP8	A6NKH3	93 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	BCE1	O60756	84 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	PPP1R17	O96001	155 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	BATF	Q16520	125 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	LINC01545	Q5VT33	79 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	PRELID3A	Q96N28	172 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	SPANXA1	Q9NS26	97 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	TOMM7	Q9P0U1	55 aa		4.53	□□□□□ -1.68
NVL-223	ENST00000496393	GAGE10	A6NGK3	116 aa		4.52	□□□□□ -1.69
NVL-223	ENST00000496393	G0S2	P27469	103 aa		4.52	□□□□□ -1.69
NVL-223	ENST00000496393	CKS2	P33552	79 aa		4.52	□□□□□ -1.69
NVL-223	ENST00000496393	LINC01547	P58512	204 aa	Predicted RBP	4.52	□□□□□ -1.69
NVL-223	ENST00000496393	MRPS36	P82909	103 aa	Known RBP	4.52	□□□□□ -1.69
NVL-223	ENST00000496393	ZC2HC1B	Q5TFG8	222 aa		4.52	□□□□□ -1.69
NVL-223	ENST00000496393	MRPL55	Q7Z7F7	128 aa	Known RBP	4.52	□□□□□ -1.69
NVL-223	ENST00000496393	SMIM2	Q9BVW6	85 aa		4.52	□□□□□ -1.69
NVL-223	ENST00000496393	MAP1LC3A	Q9H492	121 aa		4.52	□□□□□ -1.69
NVL-223	ENST00000496393	NXT2	Q9NPJ8	142 aa	Known RBP	4.52	□□□□□ -1.69
NVL-223	ENST00000496393	LINC01546	A6NGU7	62 aa		4.51	□□□□□ -1.69
NVL-223	ENST00000496393	TNFRSF6B	O95407	300 aa		4.51	□□□□□ -1.69
NVL-223	ENST00000496393	HBD	P02042	147 aa		4.51	□□□□□ -1.69
NVL-223	ENST00000496393	PRSS2	P07478	247 aa		4.51	□□□□□ -1.69
NVL-223	ENST00000496393	ATOH7	Q8N100	152 aa		4.51	□□□□□ -1.69
NVL-223	ENST00000496393	C20orf78	Q9BR46	151 aa		4.51	□□□□□ -1.69
NVL-223	ENST00000496393	PPDPF	Q9H3Y8	114 aa		4.51	□□□□□ -1.69
NVL-223	ENST00000496393	IGLV4-3	A0A075B6K6	122 aa		4.5	□□□□□ -1.69
NVL-223	ENST00000496393	PRSS47	A8MTI9	375 aa		4.5	□□□□□ -1.69
NVL-223	ENST00000496393		D6R8Y8	96 aa		4.5	□□□□□ -1.69
NVL-223	ENST00000496393	NPY	P01303	97 aa		4.5	□□□□□ -1.69
NVL-223	ENST00000496393	COX8A	P10176	69 aa		4.5	□□□□□ -1.69
NVL-223	ENST00000496393	IFI27	P40305	119 aa	Predicted RBP	4.5	□□□□□ -1.69
NVL-223	ENST00000496393	UBE2A	P49459	152 aa		4.5	□□□□□ -1.69
NVL-223	ENST00000496393	HINT1	P49773	126 aa	Predicted RBP	4.5	□□□□□ -1.69
NVL-223	ENST00000496393	CKS1B	P61024	79 aa		4.5	□□□□□ -1.69
NVL-223	ENST00000496393	IGKV2D-26	A0A0A0MRZ7	120 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	LINC01549	A6NIU2	74 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393		K7EMI3	77 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	ATP5L	O75964	103 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	SEC11A	P67812	179 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	UBE2V1	Q13404	147 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	KRTAP15-1	Q3LI76	137 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	IFI27L1	Q96BM0	104 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	LINC00167	Q96N53	147 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	KRTAP4-1	Q9BYQ7	146 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	CBY1	Q9Y3M2	126 aa		4.49	□□□□□ -1.69
NVL-223	ENST00000496393	RPL32	P62910	135 aa	Known RBP	4.48	□□□□□ -1.69
NVL-223	ENST00000496393	PRLH	P81277	87 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393	FAM229B	Q4G0N7	80 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393	C6orf226	Q5I0X4	101 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393	BVES-AS1	Q5T3Y7	98 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393	KRTAP13-1	Q8IUC0	172 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393		Q8N8P6	123 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393	TMEM141	Q96I45	108 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393	TP73-AS1	Q9UF72	201 aa		4.48	□□□□□ -1.69
NVL-223	ENST00000496393	LOC389332	A0A1B0GUA5	103 aa		4.47	□□□□□ -1.69
NVL-223	ENST00000496393		A6NDN8	102 aa		4.47	□□□□□ -1.69
NVL-223	ENST00000496393	HSD52	Q0P140	79 aa		4.47	□□□□□ -1.69
NVL-223	ENST00000496393	BOD1L2	Q8IYS8	172 aa		4.47	□□□□□ -1.69
NVL-223	ENST00000496393	C3orf22	Q8N5N4	141 aa		4.47	□□□□□ -1.69
NVL-223	ENST00000496393	IGKV2-28	A0A075B6P5	120 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393		A0A096LNJ9	63 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393		F8VRH5	84 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393		H0Y8G0	127 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393	IGKV2D-28	P01615	120 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393	NPS	P0C0P6	89 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393		Q8IZM0	81 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393	LINC01561	Q8N1V8	128 aa		4.46	□□□□□ -1.7
NVL-223	ENST00000496393	LINC00337	Q8N6G1	96 aa		4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms