RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RPP21Q9H633 154 aaKnown RBP2.58□□□□□ -2
VPS52-222ENST00000495981 IGLV10-54A0A075B6I4 117 aa2.57□□□□□ -2
VPS52-222ENST00000495981 TRBV25-1A0A075B6N4 114 aa2.57□□□□□ -2
VPS52-222ENST00000495981 IGHV3-64A0A075B6Q5 118 aa2.57□□□□□ -2
VPS52-222ENST00000495981 GVQW2A0A096LPI5 108 aaPredicted RBP2.57□□□□□ -2
VPS52-222ENST00000495981 A0A0U1RQV1 116 aa2.57□□□□□ -2
VPS52-222ENST00000495981 MUC21A0A140T8X8 626 aa2.57□□□□□ -2
VPS52-222ENST00000495981 M0QY20 66 aa2.57□□□□□ -2
VPS52-222ENST00000495981 TRGC1P0CF51 173 aa2.57□□□□□ -2
VPS52-222ENST00000495981 IGLC6P0CF74 106 aa2.57□□□□□ -2
VPS52-222ENST00000495981 IGLC3P0DOY3 106 aa2.57□□□□□ -2
VPS52-222ENST00000495981 KRTAP10-8P60410 259 aa2.57□□□□□ -2
VPS52-222ENST00000495981 CD164Q04900 197 aa2.57□□□□□ -2
VPS52-222ENST00000495981 LINC00337Q8N6G1 96 aa2.57□□□□□ -2
VPS52-222ENST00000495981 DERL1Q9BUN8 251 aa2.57□□□□□ -2
VPS52-222ENST00000495981 CYSLTR1Q9Y271 337 aa2.57□□□□□ -2
VPS52-222ENST00000495981 FCGBPQ9Y6R7 5405 aaPredicted RBP2.57□□□□□ -2
VPS52-222ENST00000495981 FXYD6-FXYD2A0A087WZ82 144 aa2.56□□□□□ -2
VPS52-222ENST00000495981 A0A096LNI7 61 aa2.56□□□□□ -2
VPS52-222ENST00000495981 IGHV1-24A0A0C4DH33 117 aa2.56□□□□□ -2
VPS52-222ENST00000495981 TINCRA0A1B0GVN0 87 aa2.56□□□□□ -2
VPS52-222ENST00000495981 KANTRA0A1W2PQU2 76 aa2.56□□□□□ -2
VPS52-222ENST00000495981 TMEM262E9PQX1 116 aa2.56□□□□□ -2
VPS52-222ENST00000495981 J3KT08 172 aa2.56□□□□□ -2
VPS52-222ENST00000495981 TAX1BP3O14907 124 aa2.56□□□□□ -2
VPS52-222ENST00000495981 PSPHP1O15172 72 aa2.56□□□□□ -2
VPS52-222ENST00000495981 UBE2G1P62253 170 aa2.56□□□□□ -2
VPS52-222ENST00000495981 FAM19A5Q7Z5A7 132 aaPredicted RBP2.56□□□□□ -2
VPS52-222ENST00000495981 ANAPC13Q9BS18 74 aa2.56□□□□□ -2
VPS52-222ENST00000495981 VAMP8Q9BV40 100 aa2.56□□□□□ -2
VPS52-222ENST00000495981 SPANXDQ9BXN6 97 aa2.56□□□□□ -2
VPS52-222ENST00000495981 CYTL1Q9NRR1 136 aa2.56□□□□□ -2
VPS52-222ENST00000495981 TRGC2P03986 189 aa2.55□□□□□ -2
VPS52-222ENST00000495981 UBE2AP49459 152 aa2.55□□□□□ -2
VPS52-222ENST00000495981 COX6A2Q02221 97 aa2.55□□□□□ -2
VPS52-222ENST00000495981 BATFQ16520 125 aa2.55□□□□□ -2
VPS52-222ENST00000495981 Q6Q795 121 aa2.55□□□□□ -2
VPS52-222ENST00000495981 MAP1LC3AQ9H492 121 aa2.55□□□□□ -2
VPS52-222ENST00000495981 TRBV20OR9-2A0A075B6H5 130 aa2.54□□□□□ -2
VPS52-222ENST00000495981 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.54□□□□□ -2
VPS52-222ENST00000495981 IGHV6-1A0A0B4J1U7 121 aa2.54□□□□□ -2
VPS52-222ENST00000495981 IGKV2-24A0A0C4DH68 120 aa2.54□□□□□ -2
VPS52-222ENST00000495981 C19orf71A6NCJ1 209 aa2.54□□□□□ -2
VPS52-222ENST00000495981 NDUFC2-KCTD14E9PQ53 114 aa2.54□□□□□ -2
VPS52-222ENST00000495981 K7EP34 96 aa2.54□□□□□ -2
VPS52-222ENST00000495981 NDUFS5O43920 106 aa2.54□□□□□ -2
VPS52-222ENST00000495981 MGPP08493 103 aa2.54□□□□□ -2
VPS52-222ENST00000495981 CENPWQ5EE01 88 aa2.54□□□□□ -2
VPS52-222ENST00000495981 SPANXN1Q5VSR9 72 aa2.54□□□□□ -2
VPS52-222ENST00000495981 AMMECR1LQ6DCA0 310 aa2.54□□□□□ -2
VPS52-222ENST00000495981 RASL11AQ6T310 242 aa2.54□□□□□ -2
VPS52-222ENST00000495981 PCP2Q8IVA1 136 aa2.54□□□□□ -2
VPS52-222ENST00000495981 MBD3L1Q8WWY6 194 aa2.54□□□□□ -2
VPS52-222ENST00000495981 CNFNQ9BYD5 112 aa2.54□□□□□ -2
VPS52-222ENST00000495981 IGLV1-50A0A075B6I6 118 aa2.53□□□□□ -2
VPS52-222ENST00000495981 A0A1B0GV50 99 aa2.53□□□□□ -2
VPS52-222ENST00000495981 A0A1B0GXF2 115 aa2.53□□□□□ -2
VPS52-222ENST00000495981 UMAD1C9J7I0 102 aa2.53□□□□□ -2
VPS52-222ENST00000495981 SPINK8P0C7L1 97 aa2.53□□□□□ -2
VPS52-222ENST00000495981 SEC11AP67812 179 aa2.53□□□□□ -2
VPS52-222ENST00000495981 SPINK6Q6UWN8 80 aa2.53□□□□□ -2
VPS52-222ENST00000495981 BAGE2Q86Y30 109 aa2.53□□□□□ -2
VPS52-222ENST00000495981 GATD1Q8NB37 220 aa2.53□□□□□ -2
VPS52-222ENST00000495981 FAM213BQ8TBF2 198 aa2.53□□□□□ -2
VPS52-222ENST00000495981 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
VPS52-222ENST00000495981 TRAV26-2A0A0B4J265 109 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 C9JAW5 83 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 C9JQL5 133 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 F8W1H4 67 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 KRTAP1-4P0C5Y4 121 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 NTF3P20783 257 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 SYCNQ0VAF6 134 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 RPL39LQ96EH5 51 aaKnown RBP2.52□□□□□ -2.01
VPS52-222ENST00000495981 LINC00526Q96FQ7 95 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 CARD19Q96LW7 228 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 CAMK2N2Q96S95 79 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 DPH3P1Q9H4G8 78 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 C8orf17Q9NRJ1 99 aa2.52□□□□□ -2.01
VPS52-222ENST00000495981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.51□□□□□ -2.01
VPS52-222ENST00000495981 A0A096LNJ9 63 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 IGKV2-29A2NJV5 120 aaPredicted RBP2.51□□□□□ -2.01
VPS52-222ENST00000495981 TMEM250H0YL14 139 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 NCR2O95944 276 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 FGF6P10767 208 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 CCL20P78556 96 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 ADIRFQ15847 76 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 PMCHL1Q16048 86 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 C4orf26Q17RF5 130 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 RNASE13Q5GAN3 156 aaKnown RBP2.51□□□□□ -2.01
VPS52-222ENST00000495981 BVES-AS1Q5T3Y7 98 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 Q6ZUT4 128 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 ST20Q9HBF5 79 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 MANBALQ9NQG1 85 aa2.51□□□□□ -2.01
VPS52-222ENST00000495981 NEBP20929 6669 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 TRAV1-1A0A0B4J248 108 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 IGHV1-58A0A0C4DH39 117 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 IGKV3OR2-268A0A0C4DH90 116 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 LINC00959A0A1B0GUT2 108 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 A0A1W2PNN7 141 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms