RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 CXorf51AA0A1B0GTR3 108 aa2.02□□□□□ -2.09
CCDC39-207ENST00000495817 SYS1-DBNDD2H3BUS1 97 aa2.02□□□□□ -2.09
CCDC39-207ENST00000495817 ERC2-IT1O76042 136 aa2.02□□□□□ -2.09
CCDC39-207ENST00000495817 CCL8P80075 99 aa2.02□□□□□ -2.09
CCDC39-207ENST00000495817 TFF3Q07654 80 aa2.02□□□□□ -2.09
CCDC39-207ENST00000495817 BVES-AS1Q5T3Y7 98 aa2.02□□□□□ -2.09
CCDC39-207ENST00000495817 TMEM254Q8TBM7 123 aa2.02□□□□□ -2.09
CCDC39-207ENST00000495817 ACANP16112 2415 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 TRAV13-2A0A0B4J235 113 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 TRAV10A0A0B4J240 114 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 TRBV10-3A0A0K0K1G6 114 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 NAP1L6A6NFF2 107 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 BAALC-AS2P0C853 105 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 SPINT3P49223 89 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 SPATA45Q537H7 98 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 C9orf116Q5BN46 136 aaPredicted RBP2.01□□□□□ -2.09
CCDC39-207ENST00000495817 RPL7L1Q6DKI1 246 aaKnown RBP2.01□□□□□ -2.09
CCDC39-207ENST00000495817 SERP2Q8N6R1 65 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 TRGV9Q99603 122 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 MGST2Q99735 147 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 NCOA6Q14686 2063 aaPredicted RBP2.01□□□□□ -2.09
CCDC39-207ENST00000495817 ZANQ9Y493 2812 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 NBEAL1Q6ZS30 2694 aa2.01□□□□□ -2.09
CCDC39-207ENST00000495817 TRAV2A0A0B4J234 112 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 HCG22E2RYF7 251 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 KRTDAPP60985 99 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 WFDC2Q14508 124 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 NCBP2-AS2Q69YL0 99 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 LYPD5Q6UWN5 251 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 UNQ6190/PRO20217Q6UXQ8 127 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 HEPN1Q6WQI6 88 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 ZNF833PQ6ZTB9 187 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 CLECL1Q8IZS7 167 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 ZNF431Q8TF32 576 aaPredicted RBP2□□□□□ -2.09
CCDC39-207ENST00000495817 NXT2Q9NPJ8 142 aaKnown RBP2□□□□□ -2.09
CCDC39-207ENST00000495817 HIGD1BQ9P298 99 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 MAP1AP78559 2803 aaPredicted RBP2□□□□□ -2.09
CCDC39-207ENST00000495817 SPTBP11277 2137 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 PKDREJQ9NTG1 2253 aa2□□□□□ -2.09
CCDC39-207ENST00000495817 PRKDCP78527 4128 aaKnown RBP1.99□□□□□ -2.09
CCDC39-207ENST00000495817 RYR3Q15413 4870 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 MYO7BQ6PIF6 2116 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 MXRA5Q9NR99 2828 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 TRAV12-1A0A0B4J245 112 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 TCRBV4S1A1TA0A5B7 111 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 H3BUT2 72 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 CCL22O00626 93 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 STATHP02808 62 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 NMSQ5H8A3 153 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 C10orf55Q5SWW7 151 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.99□□□□□ -2.09
CCDC39-207ENST00000495817 CDC42SE1Q9NRR8 79 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 RABAC1Q9UI14 185 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 DIDO1Q9BTC0 2240 aaKnown RBP1.99□□□□□ -2.09
CCDC39-207ENST00000495817 FREM1Q5H8C1 2179 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 ATRQ13535 2644 aa1.99□□□□□ -2.09
CCDC39-207ENST00000495817 COL6A5A8TX70 2615 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 TRBV7-1A0A0A6YYK4 115 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 PIGBOS1A0A0B4J2F0 54 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 A0A0G2JND7 137 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 C2orf70A6NJV1 201 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 H7BZZ5 65 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 GNGT1P63211 74 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 MPV17LQ2QL34 196 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 KRTAP26-1Q6PEX3 210 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 CYP2G1PQ6ZSU1 146 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 JMJD1CQ15652 2540 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 KMT2CQ8NEZ4 4911 aaKnown RBP1.98□□□□□ -2.09
CCDC39-207ENST00000495817 CACNA1CQ13936 2221 aa1.98□□□□□ -2.09
CCDC39-207ENST00000495817 CSPG4Q6UVK1 2322 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 A6NIN4 97 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 EFNA4P52798 201 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 PMCHL1Q16048 86 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 CSAG1Q6PB30 78 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 ODF3Q96PU9 254 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 CYP4F30PQ9H0H9 118 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 MANBALQ9NQG1 85 aa1.97□□□□□ -2.09
CCDC39-207ENST00000495817 TRRAPQ9Y4A5 3859 aa1.96□□□□□ -2.09
CCDC39-207ENST00000495817 TRAV12-3A0A0B4J271 114 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 IGKV3D-7A0A0C4DH55 119 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 TEX49A0A1B0GTD5 131 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 NDUFC1O43677 76 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 SIX6O95475 246 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 UBE2D3P61077 147 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 UBE2D2P62837 147 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 VMO1Q7Z5L0 202 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 FAM223AQ8IWN6 122 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 IFI27L1Q96BM0 104 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 LIMD2Q9BT23 127 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 BPESC1Q9GZL8 116 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 CMYA5Q8N3K9 4069 aa1.96□□□□□ -2.1
CCDC39-207ENST00000495817 AKAP6Q13023 2319 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 LOC285095A0A1B0GVY8 99 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 H0YGG7 62 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
CCDC39-207ENST00000495817 UBE2D1P51668 147 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 HMGN3Q15651 99 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 CFAP126Q5VTH2 177 aa1.95□□□□□ -2.1
CCDC39-207ENST00000495817 Q5VV11 94 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms