RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-225ENST00000495471 MAGI1Q96QZ7 1491 aaPredicted RBP-0.74□□□□□ -2.53
CCNL1-225ENST00000495471 MBD5Q9P267 1494 aa-0.74□□□□□ -2.53
CCNL1-225ENST00000495471 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 TRBV7-3A0A075B6L6 115 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 HMGN4O00479 90 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 SFT2D2O95562 160 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 SCGB1A1P11684 91 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 HIST1H1DP16402 221 aaKnown RBP-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 COPZ1P61923 177 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 KRTAP19-2Q3LHN2 52 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 KRTAP19-5Q3LI72 72 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 LSM10Q969L4 123 aaKnown RBP-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 DPH3Q96FX2 82 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 FHAD1B1AJZ9 1412 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 MYOM3Q5VTT5 1437 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 SETBP1Q9Y6X0 1596 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 SHROOM2Q13796 1616 aa-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 PDCD11Q14690 1871 aaKnown RBP-0.75□□□□□ -2.53
CCNL1-225ENST00000495471 CKS1BP61024 79 aa-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 RPS29P62273 56 aaKnown RBP-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 TMEM191AQ9H0A3 160 aa-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 TPT1P8Q9HAU6 139 aa-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 CRIPTQ9P021 101 aa-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 ANKRD30AQ9BXX3 1397 aa-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 TROQ12816 1431 aaPredicted RBP-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 A0A0G2JMZ2 1700 aa-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 FOCADQ5VW36 1801 aa-0.76□□□□□ -2.53
CCNL1-225ENST00000495471 UBR3Q6ZT12 1888 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 NUP188Q5SRE5 1749 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 XRN1Q8IZH2 1706 aaKnown RBP-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 SCN7AQ01118 1682 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 QRICH2Q9H0J4 1663 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 ALKQ9UM73 1620 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 NKTRP30414 1462 aaKnown RBP-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 FYCO1Q9BQS8 1478 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 IGLC1P0CG04 106 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 MRPL54Q6P161 138 aaKnown RBP-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 TSTD1Q8NFU3 115 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 LCN9Q8WX39 176 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 LINC01600Q96MT4 127 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 PRO1933Q9H354 126 aa-0.77□□□□□ -2.53
CCNL1-225ENST00000495471 ROBO1Q9Y6N7 1651 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 SLIT1O75093 1534 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 C1orf167Q5SNV9 1468 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 RPS25P62851 125 aaKnown RBP-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 AKAP14Q86UN6 197 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 MYOZ3Q8TDC0 251 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 PYDC1Q8WXC3 89 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 FAM167A-AS1Q96KT0 104 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 PPP3R2Q96LZ3 170 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 PFDN5Q99471 154 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 PDCD10Q9BUL8 212 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 NXT2Q9NPJ8 142 aaKnown RBP-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 CDC42SE2Q9NRR3 84 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 COPZ2Q9P299 210 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 UQCR10Q9UDW1 63 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 BCORQ6W2J9 1755 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 CEP152O94986 1710 aa-0.78□□□□□ -2.53
CCNL1-225ENST00000495471 CFTRP13569 1480 aa-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 CCDC141Q6ZP82 1450 aa-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 LOC100130705A0A1B0GUX0 176 aa-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 FAM223AQ8IWN6 122 aa-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 SPANXDQ9BXN6 97 aa-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 LINC00474Q9P2X8 69 aa-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 KIAA1551Q9HCM1 1747 aa-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 CICQ96RK0 1608 aaPredicted RBP-0.79□□□□□ -2.54
CCNL1-225ENST00000495471 GRIN2AQ12879 1464 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 CPSF1Q10570 1443 aaKnown RBP-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 ZC3H13Q5T200 1668 aaKnown RBP-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 CHKB-CPT1BH3BT56 60 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 I3L3M4 83 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 UBE2D3P61077 147 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 UBE2D2P62837 147 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 RERGLQ9H628 205 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 SERP1Q9Y6X1 66 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 ARL2-SNX15V9GYD0 113 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 ADGRL2O95490 1459 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 PLEKHH2Q8IVE3 1493 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 NLRP1Q9C000 1473 aa-0.8□□□□□ -2.54
CCNL1-225ENST00000495471 PLXNC1O60486 1568 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 H3BNG1 76 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 DEFB4AO15263 64 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 SEC11AP67812 179 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 C9orf153Q5TBE3 101 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 SNRNP25Q9BV90 132 aaKnown RBP-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 EHBP1L1Q8N3D4 1523 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 RGPD2P0DJD1 1756 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 MED14O60244 1454 aa-0.81□□□□□ -2.54
CCNL1-225ENST00000495471 TRAV30A0A087WSZ9 112 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 A0A1B0GWA3 101 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 BTG2P78543 158 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 SMIM21Q3B7S5 101 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 COMMD6Q7Z4G1 85 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 C8orf59Q8N0T1 100 aaPredicted RBP-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 ANP32BQ92688 251 aaKnown RBP-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 ARL11Q969Q4 196 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 MRPL34Q9BQ48 92 aaKnown RBP-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 ZNF831Q5JPB2 1677 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 NCOA3Q9Y6Q9 1424 aa-0.82□□□□□ -2.54
CCNL1-225ENST00000495471 A0A1B0GUL6 1792 aa-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms