RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 DPM2O94777 84 aa10.66□□□□□ -0.7
HDAC4-211ENST00000494800 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
HDAC4-211ENST00000494800 TNXBP22105 4242 aa10.66□□□□□ -0.7
HDAC4-211ENST00000494800 HMCN2Q8NDA2 5059 aa10.65□□□□□ -0.7
HDAC4-211ENST00000494800 IGLV1-50A0A075B6I6 118 aa10.65□□□□□ -0.7
HDAC4-211ENST00000494800 IGKV2-28A0A075B6P5 120 aa10.65□□□□□ -0.7
HDAC4-211ENST00000494800 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
HDAC4-211ENST00000494800 IGKV2D-28P01615 120 aa10.65□□□□□ -0.7
HDAC4-211ENST00000494800 VPREB1P12018 145 aa10.65□□□□□ -0.7
HDAC4-211ENST00000494800 PLEKHB2Q96CS7 222 aa10.65□□□□□ -0.7
HDAC4-211ENST00000494800 IGKCP01834 107 aa10.64□□□□□ -0.71
HDAC4-211ENST00000494800 UBE2AP49459 152 aa10.64□□□□□ -0.71
HDAC4-211ENST00000494800 PRR26Q8N8Z3 221 aa10.64□□□□□ -0.71
HDAC4-211ENST00000494800 LEPROTO15243 131 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BKO60814 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BJP06899 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 SMIM13P0DJ93 91 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BOP23527 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BBP33778 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 RPL13AP40429 203 aaKnown RBP10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BDP58876 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BCP62807 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST2H2BEQ16778 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BHQ93079 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BNQ99877 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 HIST1H2BMQ99879 126 aa10.63□□□□□ -0.71
HDAC4-211ENST00000494800 PMCHL2Q9BQD1 86 aa10.61□□□□□ -0.71
HDAC4-211ENST00000494800 KRTAP1-4P0C5Y4 121 aa10.6□□□□□ -0.71
HDAC4-211ENST00000494800 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
HDAC4-211ENST00000494800 NMUP48645 174 aa10.6□□□□□ -0.71
HDAC4-211ENST00000494800 MIR7-3HGQ8N6C7 128 aa10.6□□□□□ -0.71
HDAC4-211ENST00000494800 J3QQQ9 107 aa10.59□□□□□ -0.71
HDAC4-211ENST00000494800 BOD1L2Q8IYS8 172 aa10.59□□□□□ -0.71
HDAC4-211ENST00000494800 M0R378 163 aa10.58□□□□□ -0.72
HDAC4-211ENST00000494800 TMEM126AQ9H061 195 aa10.58□□□□□ -0.72
HDAC4-211ENST00000494800 SYS1-DBNDD2H3BUS1 97 aa10.57□□□□□ -0.72
HDAC4-211ENST00000494800 FAM19A1Q7Z5A9 133 aa10.57□□□□□ -0.72
HDAC4-211ENST00000494800 TSPEAR-AS2P59090 65 aa10.56□□□□□ -0.72
HDAC4-211ENST00000494800 Q8NDZ9 215 aa10.56□□□□□ -0.72
HDAC4-211ENST00000494800 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
HDAC4-211ENST00000494800 TMEM238C9JI98 176 aa10.55□□□□□ -0.72
HDAC4-211ENST00000494800 S100A12P80511 92 aa10.54□□□□□ -0.72
HDAC4-211ENST00000494800 KRTAP13-1Q8IUC0 172 aa10.54□□□□□ -0.72
HDAC4-211ENST00000494800 MIEN1Q9BRT3 115 aa10.54□□□□□ -0.72
HDAC4-211ENST00000494800 CRYGAP11844 174 aa10.53□□□□□ -0.72
HDAC4-211ENST00000494800 PRLHP81277 87 aa10.53□□□□□ -0.72
HDAC4-211ENST00000494800 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
HDAC4-211ENST00000494800 E9PLD3 99 aa10.52□□□□□ -0.73
HDAC4-211ENST00000494800 NCR3O14931 201 aa10.52□□□□□ -0.73
HDAC4-211ENST00000494800 PRYO14603 147 aa10.5□□□□□ -0.73
HDAC4-211ENST00000494800 COA6Q5JTJ3 125 aaKnown RBP10.5□□□□□ -0.73
HDAC4-211ENST00000494800 LINC01545Q5VT33 79 aa10.5□□□□□ -0.73
HDAC4-211ENST00000494800 DAND5Q8N907 189 aa10.5□□□□□ -0.73
HDAC4-211ENST00000494800 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
HDAC4-211ENST00000494800 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
HDAC4-211ENST00000494800 TYMSOSQ8TAI1 123 aa10.48□□□□□ -0.73
HDAC4-211ENST00000494800 C20orf202A1L168 122 aa10.47□□□□□ -0.73
HDAC4-211ENST00000494800 KRTDAPP60985 99 aa10.47□□□□□ -0.73
HDAC4-211ENST00000494800 FAM229BQ4G0N7 80 aa10.47□□□□□ -0.73
HDAC4-211ENST00000494800 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
HDAC4-211ENST00000494800 A0A0J9YXY3 114 aa10.46□□□□□ -0.73
HDAC4-211ENST00000494800 TRBV10-2A0A0K0K1G8 114 aa10.46□□□□□ -0.73
HDAC4-211ENST00000494800 C3orf79P0CE67 100 aa10.46□□□□□ -0.73
HDAC4-211ENST00000494800 KCNQ1DNQ9H478 68 aa10.46□□□□□ -0.73
HDAC4-211ENST00000494800 SPANXB1Q9NS25 103 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-211ENST00000494800 A0A087X002 238 aa10.45□□□□□ -0.74
HDAC4-211ENST00000494800 ETDCA0A1B0GVM5 59 aa10.45□□□□□ -0.74
HDAC4-211ENST00000494800 S100A1P23297 94 aa10.45□□□□□ -0.74
HDAC4-211ENST00000494800 LINC00337Q8N6G1 96 aa10.45□□□□□ -0.74
HDAC4-211ENST00000494800 TRBV10-3A0A0K0K1G6 114 aa10.44□□□□□ -0.74
HDAC4-211ENST00000494800 NDUFC2O95298 119 aa10.44□□□□□ -0.74
HDAC4-211ENST00000494800 ANAPC11Q9NYG5 84 aa10.44□□□□□ -0.74
HDAC4-211ENST00000494800 DDTP30046 118 aa10.43□□□□□ -0.74
HDAC4-211ENST00000494800 AKR1D1P51857 326 aa10.43□□□□□ -0.74
HDAC4-211ENST00000494800 S100A7L2Q5SY68 101 aa10.43□□□□□ -0.74
HDAC4-211ENST00000494800 ZNF706Q9Y5V0 76 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-211ENST00000494800 ZNF815PA8K554 130 aa10.41□□□□□ -0.74
HDAC4-211ENST00000494800 SPRR1AP35321 89 aa10.41□□□□□ -0.74
HDAC4-211ENST00000494800 TIMM17BO60830 172 aa10.4□□□□□ -0.74
HDAC4-211ENST00000494800 NPC2P61916 151 aa10.4□□□□□ -0.74
HDAC4-211ENST00000494800 UBR4Q5T4S7 5183 aa10.39□□□□□ -0.75
HDAC4-211ENST00000494800 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
HDAC4-211ENST00000494800 CBY1Q9Y3M2 126 aa10.39□□□□□ -0.75
HDAC4-211ENST00000494800 TSPAN13O95857 204 aa10.37□□□□□ -0.75
HDAC4-211ENST00000494800 KRTAP13-2Q52LG2 175 aa10.37□□□□□ -0.75
HDAC4-211ENST00000494800 SPRR4Q96PI1 79 aa10.37□□□□□ -0.75
HDAC4-211ENST00000494800 KRTAP4-16G5E9R7 235 aaPredicted RBP10.36□□□□□ -0.75
HDAC4-211ENST00000494800 IGLV6-57P01721 117 aa10.36□□□□□ -0.75
HDAC4-211ENST00000494800 S100A2P29034 98 aa10.36□□□□□ -0.75
HDAC4-211ENST00000494800 SOSTDC1Q6X4U4 206 aa10.36□□□□□ -0.75
HDAC4-211ENST00000494800 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
HDAC4-211ENST00000494800 TRAV23DV6A0A075B6W5 121 aa10.35□□□□□ -0.75
HDAC4-211ENST00000494800 PRR4Q16378 134 aa10.35□□□□□ -0.75
HDAC4-211ENST00000494800 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
HDAC4-211ENST00000494800 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
HDAC4-211ENST00000494800 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
HDAC4-211ENST00000494800 SMCR5Q8TEV8 140 aa10.35□□□□□ -0.75
HDAC4-211ENST00000494800 B5MCH6 92 aa10.34□□□□□ -0.75
HDAC4-211ENST00000494800 JOSD1Q15040 202 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms