RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZNF22P17026 224 aaPredicted RBP5.52□□□□□ -1.53
UBR4-216ENST00000494503 SPAG11AQ6PDA7 123 aa5.52□□□□□ -1.53
UBR4-216ENST00000494503 DAND5Q8N907 189 aa5.52□□□□□ -1.53
UBR4-216ENST00000494503 GNB1LQ9BYB4 327 aa5.52□□□□□ -1.53
UBR4-216ENST00000494503 ZNF706Q9Y5V0 76 aaPredicted RBP5.52□□□□□ -1.53
UBR4-216ENST00000494503 COX17Q14061 63 aa5.51□□□□□ -1.53
UBR4-216ENST00000494503 TRAV9-1A0A075B6T8 112 aa5.5□□□□□ -1.53
UBR4-216ENST00000494503 IGLV5-39A0A0G2JS06 123 aa5.5□□□□□ -1.53
UBR4-216ENST00000494503 LINC01547P58512 204 aaPredicted RBP5.5□□□□□ -1.53
UBR4-216ENST00000494503 PMCHL1Q16048 86 aa5.5□□□□□ -1.53
UBR4-216ENST00000494503 Q8NBF4 154 aa5.5□□□□□ -1.53
UBR4-216ENST00000494503 Q8NDZ9 215 aa5.5□□□□□ -1.53
UBR4-216ENST00000494503 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
UBR4-216ENST00000494503 NCR3O14931 201 aa5.49□□□□□ -1.53
UBR4-216ENST00000494503 MEIG1Q5JSS6 88 aa5.49□□□□□ -1.53
UBR4-216ENST00000494503 SFTA2Q6UW10 78 aa5.49□□□□□ -1.53
UBR4-216ENST00000494503 FP248Q71RG6 208 aaPredicted RBP5.49□□□□□ -1.53
UBR4-216ENST00000494503 BAGE3Q86Y29 109 aa5.49□□□□□ -1.53
UBR4-216ENST00000494503 ETDCA0A1B0GVM5 59 aa5.48□□□□□ -1.53
UBR4-216ENST00000494503 LINC01546A6NGU7 62 aa5.48□□□□□ -1.53
UBR4-216ENST00000494503 C11orf86A6NJI1 115 aa5.48□□□□□ -1.53
UBR4-216ENST00000494503 HBDP02042 147 aa5.48□□□□□ -1.53
UBR4-216ENST00000494503 CTAG1AP78358 180 aa5.48□□□□□ -1.53
UBR4-216ENST00000494503 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
UBR4-216ENST00000494503 NDUFA12Q9UI09 145 aa5.48□□□□□ -1.53
UBR4-216ENST00000494503 IGLV9-49A0A0B4J1Y8 123 aa5.47□□□□□ -1.53
UBR4-216ENST00000494503 S100A12P80511 92 aa5.47□□□□□ -1.53
UBR4-216ENST00000494503 COX19Q49B96 90 aa5.47□□□□□ -1.53
UBR4-216ENST00000494503 SEC11CQ9BY50 192 aa5.47□□□□□ -1.53
UBR4-216ENST00000494503 TMEM218A2RU14 115 aa5.46□□□□□ -1.54
UBR4-216ENST00000494503 PRYO14603 147 aa5.46□□□□□ -1.54
UBR4-216ENST00000494503 LINC00614P0C842 121 aa5.46□□□□□ -1.54
UBR4-216ENST00000494503 GAGE2AQ6NT46 116 aa5.46□□□□□ -1.54
UBR4-216ENST00000494503 SMCR5Q8TEV8 140 aa5.46□□□□□ -1.54
UBR4-216ENST00000494503 RPS10P5Q9NQ39 176 aa5.46□□□□□ -1.54
UBR4-216ENST00000494503 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
UBR4-216ENST00000494503 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
UBR4-216ENST00000494503 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
UBR4-216ENST00000494503 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
UBR4-216ENST00000494503 MOBPQ13875 183 aa5.45□□□□□ -1.54
UBR4-216ENST00000494503 KRTAP13-3Q3SY46 172 aa5.45□□□□□ -1.54
UBR4-216ENST00000494503 CLLU1Q5K131 121 aa5.45□□□□□ -1.54
UBR4-216ENST00000494503 UQCC3Q6UW78 93 aa5.45□□□□□ -1.54
UBR4-216ENST00000494503 TRAPPC1Q9Y5R8 145 aa5.45□□□□□ -1.54
UBR4-216ENST00000494503 A0A096LNJ9 63 aa5.44□□□□□ -1.54
UBR4-216ENST00000494503 SPINK1P00995 79 aa5.44□□□□□ -1.54
UBR4-216ENST00000494503 C18orf32Q8TCD1 76 aa5.44□□□□□ -1.54
UBR4-216ENST00000494503 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
UBR4-216ENST00000494503 FAM19A2Q8N3H0 131 aa5.43□□□□□ -1.54
UBR4-216ENST00000494503 MIR7-3HGQ8N6C7 128 aa5.43□□□□□ -1.54
UBR4-216ENST00000494503 TRBV10-3A0A0K0K1G6 114 aa5.42□□□□□ -1.54
UBR4-216ENST00000494503 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
UBR4-216ENST00000494503 H0Y8G0 127 aa5.42□□□□□ -1.54
UBR4-216ENST00000494503 C9orf153Q5TBE3 101 aa5.42□□□□□ -1.54
UBR4-216ENST00000494503 URB1-AS1Q96HZ7 61 aa5.42□□□□□ -1.54
UBR4-216ENST00000494503 COMMD7Q86VX2 200 aa5.41□□□□□ -1.54
UBR4-216ENST00000494503 MAP1LC3CQ9BXW4 147 aa5.41□□□□□ -1.54
UBR4-216ENST00000494503 RHEBQ15382 184 aa5.4□□□□□ -1.54
UBR4-216ENST00000494503 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.54
UBR4-216ENST00000494503 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
UBR4-216ENST00000494503 SLC25A20O43772 301 aa5.39□□□□□ -1.55
UBR4-216ENST00000494503 DDTP30046 118 aa5.39□□□□□ -1.55
UBR4-216ENST00000494503 HERV-K104P63124 156 aa5.39□□□□□ -1.55
UBR4-216ENST00000494503 IFI27L1Q96BM0 104 aa5.39□□□□□ -1.55
UBR4-216ENST00000494503 MIEN1Q9BRT3 115 aa5.39□□□□□ -1.55
UBR4-216ENST00000494503 KRTAP4-1Q9BYQ7 146 aa5.39□□□□□ -1.55
UBR4-216ENST00000494503 MYMXA0A1B0GTQ4 84 aa5.38□□□□□ -1.55
UBR4-216ENST00000494503 ERC2-IT1O76042 136 aa5.38□□□□□ -1.55
UBR4-216ENST00000494503 SPRR1AP35321 89 aa5.38□□□□□ -1.55
UBR4-216ENST00000494503 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
UBR4-216ENST00000494503 S100A7L2Q5SY68 101 aa5.38□□□□□ -1.55
UBR4-216ENST00000494503 Q8N377 158 aa5.38□□□□□ -1.55
UBR4-216ENST00000494503 B5MCH6 92 aa5.37□□□□□ -1.55
UBR4-216ENST00000494503 SSBP3-AS1Q7Z2R9 100 aa5.37□□□□□ -1.55
UBR4-216ENST00000494503 TRAV12-1A0A0B4J245 112 aa5.36□□□□□ -1.55
UBR4-216ENST00000494503 KRTAP4-16G5E9R7 235 aaPredicted RBP5.36□□□□□ -1.55
UBR4-216ENST00000494503 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
UBR4-216ENST00000494503 HSBP1O75506 76 aa5.35□□□□□ -1.55
UBR4-216ENST00000494503 NPC2P61916 151 aa5.35□□□□□ -1.55
UBR4-216ENST00000494503 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
UBR4-216ENST00000494503 JOSD1Q15040 202 aaPredicted RBP5.35□□□□□ -1.55
UBR4-216ENST00000494503 XP32Q5T750 250 aa5.35□□□□□ -1.55
UBR4-216ENST00000494503 HRCT1Q6UXD1 115 aa5.35□□□□□ -1.55
UBR4-216ENST00000494503 Q6ZRX8 168 aa5.35□□□□□ -1.55
UBR4-216ENST00000494503 CHCHD1Q96BP2 118 aaKnown RBP5.35□□□□□ -1.55
UBR4-216ENST00000494503 Q9BRP9 147 aa5.35□□□□□ -1.55
UBR4-216ENST00000494503 APOC3P02656 99 aa5.34□□□□□ -1.55
UBR4-216ENST00000494503 SPANXB1Q9NS25 103 aaPredicted RBP5.34□□□□□ -1.55
UBR4-216ENST00000494503 TRAV23DV6A0A075B6W5 121 aa5.33□□□□□ -1.56
UBR4-216ENST00000494503 C9orf92A6NGG3 77 aa5.33□□□□□ -1.56
UBR4-216ENST00000494503 LGALS3P17931 250 aaKnown RBP5.33□□□□□ -1.56
UBR4-216ENST00000494503 TSPEAR-AS2P59090 65 aa5.33□□□□□ -1.56
UBR4-216ENST00000494503 IFITM2Q01629 132 aa5.33□□□□□ -1.56
UBR4-216ENST00000494503 NDUFA5Q16718 116 aa5.33□□□□□ -1.56
UBR4-216ENST00000494503 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
UBR4-216ENST00000494503 TRBV10-2A0A0K0K1G8 114 aa5.32□□□□□ -1.56
UBR4-216ENST00000494503 LEPROTO15243 131 aa5.32□□□□□ -1.56
UBR4-216ENST00000494503 HINT1P49773 126 aaPredicted RBP5.32□□□□□ -1.56
UBR4-216ENST00000494503 HERVK_113P61574 105 aa5.32□□□□□ -1.56
UBR4-216ENST00000494503 C10orf91Q5T1B1 145 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms