RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
ERCC3-209ENST00000494464 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
ERCC3-209ENST00000494464 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.06
ERCC3-209ENST00000494464 IFITM1P13164 125 aa8.45□□□□□ -1.06
ERCC3-209ENST00000494464 XCL1P47992 114 aa8.45□□□□□ -1.06
ERCC3-209ENST00000494464 KRTAP10-4P60372 401 aaPredicted RBP8.45□□□□□ -1.06
ERCC3-209ENST00000494464 VAMP3Q15836 100 aa8.44□□□□□ -1.06
ERCC3-209ENST00000494464 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
ERCC3-209ENST00000494464 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
ERCC3-209ENST00000494464 RAB37Q96AX2 223 aa8.44□□□□□ -1.06
ERCC3-209ENST00000494464 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
ERCC3-209ENST00000494464 A0A0B4J2C4 111 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 A0A1W2PPM0 123 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 H3BUT2 72 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 PANO1I0J062 215 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 COX7A2LO14548 114 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 UBE2V1Q13404 147 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 ADAMTSL4-AS1Q5T5F5 129 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 MUSTN1Q8IVN3 82 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 Q8IZM0 81 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 HERC1Q15751 4861 aa8.43□□□□□ -1.06
ERCC3-209ENST00000494464 DMBT1Q9UGM3 2413 aaPredicted RBP8.42□□□□□ -1.06
ERCC3-209ENST00000494464 A4D1N5 150 aa8.42□□□□□ -1.06
ERCC3-209ENST00000494464 HIGD2BQ4VC39 106 aa8.42□□□□□ -1.06
ERCC3-209ENST00000494464 PKHD1L1Q86WI1 4243 aa8.41□□□□□ -1.06
ERCC3-209ENST00000494464 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
ERCC3-209ENST00000494464 CFC1P0CG37 223 aa8.41□□□□□ -1.06
ERCC3-209ENST00000494464 MEIG1Q5JSS6 88 aa8.41□□□□□ -1.06
ERCC3-209ENST00000494464 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
ERCC3-209ENST00000494464 K7EP34 96 aa8.4□□□□□ -1.06
ERCC3-209ENST00000494464 FABP2P12104 132 aa8.4□□□□□ -1.06
ERCC3-209ENST00000494464 CXCL5P42830 114 aa8.4□□□□□ -1.06
ERCC3-209ENST00000494464 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
ERCC3-209ENST00000494464 APOMO95445 188 aa8.39□□□□□ -1.07
ERCC3-209ENST00000494464 PRSS2P07478 247 aa8.39□□□□□ -1.07
ERCC3-209ENST00000494464 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
ERCC3-209ENST00000494464 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
ERCC3-209ENST00000494464 CHTF8P0CG12 524 aa8.38□□□□□ -1.07
ERCC3-209ENST00000494464 LINC00308Q8TCZ7 52 aa8.38□□□□□ -1.07
ERCC3-209ENST00000494464 NAA38Q9BRA0 125 aaKnown RBP8.38□□□□□ -1.07
ERCC3-209ENST00000494464 PRO1854Q9UHT4 67 aa8.38□□□□□ -1.07
ERCC3-209ENST00000494464 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
ERCC3-209ENST00000494464 A0A087WYN8 130 aa8.37□□□□□ -1.07
ERCC3-209ENST00000494464 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
ERCC3-209ENST00000494464 TSPAN13O95857 204 aa8.37□□□□□ -1.07
ERCC3-209ENST00000494464 MALP21145 153 aa8.37□□□□□ -1.07
ERCC3-209ENST00000494464 KIAA0087Q14695 138 aa8.37□□□□□ -1.07
ERCC3-209ENST00000494464 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
ERCC3-209ENST00000494464 SPCS1Q9Y6A9 102 aa8.37□□□□□ -1.07
ERCC3-209ENST00000494464 GAGE10A6NGK3 116 aa8.36□□□□□ -1.07
ERCC3-209ENST00000494464 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
ERCC3-209ENST00000494464 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
ERCC3-209ENST00000494464 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
ERCC3-209ENST00000494464 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
ERCC3-209ENST00000494464 LYRM7Q5U5X0 104 aa8.35□□□□□ -1.07
ERCC3-209ENST00000494464 DAND5Q8N907 189 aa8.35□□□□□ -1.07
ERCC3-209ENST00000494464 FAT3Q8TDW7 4589 aa8.35□□□□□ -1.07
ERCC3-209ENST00000494464 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
ERCC3-209ENST00000494464 ERG28Q9UKR5 140 aa8.35□□□□□ -1.07
ERCC3-209ENST00000494464 J3QL48 77 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 CKS1BP61024 79 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 NPC2P61916 151 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 SYCNQ0VAF6 134 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
ERCC3-209ENST00000494464 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
ERCC3-209ENST00000494464 A0A096LNI7 61 aa8.33□□□□□ -1.08
ERCC3-209ENST00000494464 IGKV2-24A0A0C4DH68 120 aa8.33□□□□□ -1.08
ERCC3-209ENST00000494464 COX17Q14061 63 aa8.33□□□□□ -1.08
ERCC3-209ENST00000494464 DPH3Q96FX2 82 aa8.33□□□□□ -1.08
ERCC3-209ENST00000494464 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
ERCC3-209ENST00000494464 OXTP01178 125 aa8.32□□□□□ -1.08
ERCC3-209ENST00000494464 LINC00158P58513 81 aa8.32□□□□□ -1.08
ERCC3-209ENST00000494464 C2orf48Q96LS8 159 aa8.32□□□□□ -1.08
ERCC3-209ENST00000494464 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
ERCC3-209ENST00000494464 LOC107984156A0A0G2JMH3 177 aa8.3□□□□□ -1.08
ERCC3-209ENST00000494464 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
ERCC3-209ENST00000494464 Q6ZRU5 148 aa8.3□□□□□ -1.08
ERCC3-209ENST00000494464 ARL17AQ8IVW1 177 aa8.3□□□□□ -1.08
ERCC3-209ENST00000494464 TRBV20-1A0A075B6N2 111 aa8.29□□□□□ -1.08
ERCC3-209ENST00000494464 TRBV30A0A0K0K1B3 111 aa8.29□□□□□ -1.08
ERCC3-209ENST00000494464 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
ERCC3-209ENST00000494464 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
ERCC3-209ENST00000494464 F8WDY8 70 aa8.28□□□□□ -1.08
ERCC3-209ENST00000494464 PFN2P35080 140 aa8.28□□□□□ -1.08
ERCC3-209ENST00000494464 RPL13AP40429 203 aaKnown RBP8.28□□□□□ -1.08
ERCC3-209ENST00000494464 Q1RN00 199 aa8.28□□□□□ -1.08
ERCC3-209ENST00000494464 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
ERCC3-209ENST00000494464 TRAV13-2A0A0B4J235 113 aa8.26□□□□□ -1.09
ERCC3-209ENST00000494464 PSMB2P49721 201 aa8.26□□□□□ -1.09
ERCC3-209ENST00000494464 RNF151Q2KHN1 245 aa8.26□□□□□ -1.09
ERCC3-209ENST00000494464 H7C2G1 150 aa8.25□□□□□ -1.09
ERCC3-209ENST00000494464 TRIAP1O43715 76 aa8.25□□□□□ -1.09
ERCC3-209ENST00000494464 F8W1H4 67 aa8.24□□□□□ -1.09
ERCC3-209ENST00000494464 NDUFC2O95298 119 aa8.24□□□□□ -1.09
ERCC3-209ENST00000494464 PRR3P79522 188 aaKnown RBP8.24□□□□□ -1.09
ERCC3-209ENST00000494464 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms