RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 K7EP34 96 aa4.45□□□□□ -1.7
MSH5-217ENST00000494458 SLPIP03973 132 aa4.45□□□□□ -1.7
MSH5-217ENST00000494458 LINC00158P58513 81 aa4.45□□□□□ -1.7
MSH5-217ENST00000494458 Q6ZRN7 208 aaPredicted RBP4.45□□□□□ -1.7
MSH5-217ENST00000494458 LINC01600Q96MT4 127 aa4.45□□□□□ -1.7
MSH5-217ENST00000494458 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 NBDYA0A0U1RRE5 68 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 ZNF561-AS1K7EIQ3 104 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 FABP2P12104 132 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 PFN2P35080 140 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 C9orf116Q5BN46 136 aaPredicted RBP4.44□□□□□ -1.7
MSH5-217ENST00000494458 CASC10Q5T4H9 136 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 Q6ZR54 194 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 LINC00337Q8N6G1 96 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 SND1-IT1Q9HBX3 110 aa4.44□□□□□ -1.7
MSH5-217ENST00000494458 TRAV13-2A0A0B4J235 113 aa4.43□□□□□ -1.7
MSH5-217ENST00000494458 CNBPP62633 177 aaKnown RBP4.43□□□□□ -1.7
MSH5-217ENST00000494458 TTC32Q5I0X7 151 aa4.43□□□□□ -1.7
MSH5-217ENST00000494458 Q6ZRU5 148 aa4.43□□□□□ -1.7
MSH5-217ENST00000494458 Q8NDZ9 215 aa4.43□□□□□ -1.7
MSH5-217ENST00000494458 LINC00526Q96FQ7 95 aa4.43□□□□□ -1.7
MSH5-217ENST00000494458 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
MSH5-217ENST00000494458 DNAH2Q9P225 4427 aa4.43□□□□□ -1.7
MSH5-217ENST00000494458 TRBV20-1A0A075B6N2 111 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 LRCOL1A6NCL2 159 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 GAGE10A6NGK3 116 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 USP17L23D6RBM5 183 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 RPL28P46779 137 aaKnown RBP4.42□□□□□ -1.7
MSH5-217ENST00000494458 NPC2P61916 151 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 SYCNQ0VAF6 134 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 VAMP3Q15836 100 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 GTF2H5Q6ZYL4 71 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 WWC2-AS2Q96NR7 200 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 CAMK2N2Q96S95 79 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 NAA38Q9BRA0 125 aaKnown RBP4.42□□□□□ -1.7
MSH5-217ENST00000494458 Q9HAA7 133 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 PRO0461Q9UI25 63 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 PLA2G2DQ9UNK4 145 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 KMT2AQ03164 3969 aa4.42□□□□□ -1.7
MSH5-217ENST00000494458 M0QXV9 152 aa4.41□□□□□ -1.7
MSH5-217ENST00000494458 TRIAP1O43715 76 aa4.41□□□□□ -1.7
MSH5-217ENST00000494458 HIGD2BQ4VC39 106 aa4.41□□□□□ -1.7
MSH5-217ENST00000494458 LYRM7Q5U5X0 104 aa4.41□□□□□ -1.7
MSH5-217ENST00000494458 UBE2DNLQ8IWF7 75 aa4.41□□□□□ -1.7
MSH5-217ENST00000494458 SPCS1Q9Y6A9 102 aa4.41□□□□□ -1.7
MSH5-217ENST00000494458 ALMS1Q8TCU4 4167 aa4.41□□□□□ -1.7
MSH5-217ENST00000494458 TCL1BO95988 128 aa4.4□□□□□ -1.71
MSH5-217ENST00000494458 IGLV6-57P01721 117 aa4.4□□□□□ -1.71
MSH5-217ENST00000494458 RPL13AP40429 203 aaKnown RBP4.4□□□□□ -1.71
MSH5-217ENST00000494458 WFDC2Q14508 124 aa4.4□□□□□ -1.71
MSH5-217ENST00000494458 Q6ZRP5 223 aa4.4□□□□□ -1.71
MSH5-217ENST00000494458 IGLV5-37A0A075B6J1 123 aa4.39□□□□□ -1.71
MSH5-217ENST00000494458 F8W1H4 67 aa4.39□□□□□ -1.71
MSH5-217ENST00000494458 C3orf84H3BNL1 204 aa4.39□□□□□ -1.71
MSH5-217ENST00000494458 VPREB1P12018 145 aa4.39□□□□□ -1.71
MSH5-217ENST00000494458 CARD19Q96LW7 228 aa4.39□□□□□ -1.71
MSH5-217ENST00000494458 TMEM126AQ9H061 195 aa4.39□□□□□ -1.71
MSH5-217ENST00000494458 DNAH17Q9UFH2 4485 aa4.38□□□□□ -1.71
MSH5-217ENST00000494458 EPM2AB3EWF7 344 aa4.38□□□□□ -1.71
MSH5-217ENST00000494458 H3BMG7 143 aa4.38□□□□□ -1.71
MSH5-217ENST00000494458 LST1O00453 97 aa4.38□□□□□ -1.71
MSH5-217ENST00000494458 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
MSH5-217ENST00000494458 C14orf177Q52M58 125 aa4.38□□□□□ -1.71
MSH5-217ENST00000494458 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
MSH5-217ENST00000494458 SMIM11BQ8TCY0 68 aa4.38□□□□□ -1.71
MSH5-217ENST00000494458 TGP01266 2768 aa4.37□□□□□ -1.71
MSH5-217ENST00000494458 H0YGX0 51 aa4.37□□□□□ -1.71
MSH5-217ENST00000494458 COX6CP09669 75 aa4.37□□□□□ -1.71
MSH5-217ENST00000494458 KRTAP7-1Q8IUC3 87 aa4.37□□□□□ -1.71
MSH5-217ENST00000494458 HECTD4Q9Y4D8 3996 aa4.37□□□□□ -1.71
MSH5-217ENST00000494458 TRBV7-6A0A0J9YX20 115 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 LOC107984640A0A0U1RRK4 108 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 A0A1B0GX51 115 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 M0R378 163 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 TRACP01848 142 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 SCGB1C2P0DMR2 95 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 PSMB2P49721 201 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 ATXN8Q156A1 80 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 C9orf163Q8N9P6 203 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 LINC00476Q8WZB0 136 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 LINC00167Q96N53 147 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
MSH5-217ENST00000494458 C16orf90A8MZG2 172 aa4.35□□□□□ -1.71
MSH5-217ENST00000494458 H7C2G1 150 aa4.35□□□□□ -1.71
MSH5-217ENST00000494458 Q1RN00 199 aa4.35□□□□□ -1.71
MSH5-217ENST00000494458 LINC01620Q4KN68 170 aa4.35□□□□□ -1.71
MSH5-217ENST00000494458 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
MSH5-217ENST00000494458 FAM218AQ96MZ4 157 aa4.35□□□□□ -1.71
MSH5-217ENST00000494458 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
MSH5-217ENST00000494458 A0A087WTM6 91 aa4.34□□□□□ -1.71
MSH5-217ENST00000494458 LECT2O14960 151 aa4.34□□□□□ -1.71
MSH5-217ENST00000494458 PSCAO43653 123 aa4.34□□□□□ -1.71
MSH5-217ENST00000494458 Q8N814 137 aa4.34□□□□□ -1.71
MSH5-217ENST00000494458 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
MSH5-217ENST00000494458 KCNQ1DNQ9H478 68 aa4.34□□□□□ -1.71
MSH5-217ENST00000494458 FRAS1Q86XX4 4008 aa4.34□□□□□ -1.72
MSH5-217ENST00000494458 TRBV10-3A0A0K0K1G6 114 aa4.33□□□□□ -1.72
MSH5-217ENST00000494458 KRTAP4-16G5E9R7 235 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms