RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 DOT1LQ8TEK3 1739 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 SEC16AO15027 2179 aa1.05□□□□□ -2.24
PTPN12-212ENST00000494248 FBN1P35555 2871 aaKnown RBP1.05□□□□□ -2.24
PTPN12-212ENST00000494248 PI4KAP42356 2102 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 DIDO1Q9BTC0 2240 aaKnown RBP1.04□□□□□ -2.24
PTPN12-212ENST00000494248 NRAPQ86VF7 1730 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 ANKRD36CQ5JPF3 1778 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 SMIM27A0A1W2PRY6 76 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 G3V318 75 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 K7EMI3 77 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 ANKRD36A6QL64 1941 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 ZFHX2Q9C0A1 2572 aaPredicted RBP1.04□□□□□ -2.24
PTPN12-212ENST00000494248 PCDH15Q96QU1 1955 aa1.04□□□□□ -2.24
PTPN12-212ENST00000494248 PAPPA2Q9BXP8 1791 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 KMT2BQ9UMN6 2715 aaPredicted RBP1.03□□□□□ -2.24
PTPN12-212ENST00000494248 KIAA0100Q14667 2235 aaKnown RBP1.03□□□□□ -2.24
PTPN12-212ENST00000494248 IGIPA6NJ69 53 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 LY6G6CO95867 125 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 RPL38P63173 70 aaKnown RBP1.03□□□□□ -2.24
PTPN12-212ENST00000494248 HAMPP81172 84 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 SPINK13Q1W4C9 94 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 LINC00575Q6W349 94 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 TULP4Q9NRJ4 1543 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 A0A0G2JMZ2 1700 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 CDC42BPAQ5VT25 1732 aa1.03□□□□□ -2.24
PTPN12-212ENST00000494248 M0R1W7 72 aa1.02□□□□□ -2.25
PTPN12-212ENST00000494248 ARFGEF3Q5TH69 2177 aa1.02□□□□□ -2.25
PTPN12-212ENST00000494248 MYO7BQ6PIF6 2116 aa1.02□□□□□ -2.25
PTPN12-212ENST00000494248 SSBP3-AS1Q7Z2R9 100 aa1.02□□□□□ -2.25
PTPN12-212ENST00000494248 KCNQ1DNQ9H478 68 aa1.02□□□□□ -2.25
PTPN12-212ENST00000494248 TET1Q8NFU7 2136 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 LRRC37AA6NMS7 1700 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 SSC5DA1L4H1 1573 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 LINC01546A6NGU7 62 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 CPSF4LA6NMK7 179 aaKnown RBP1.01□□□□□ -2.25
PTPN12-212ENST00000494248 I3L3M4 83 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 ARL14EPLP0DKL9 152 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 COX6B1P14854 86 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 RPL37P61927 97 aaKnown RBP1.01□□□□□ -2.25
PTPN12-212ENST00000494248 KRTAP13-4Q3LI77 160 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 BRWD1Q9NSI6 2320 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 SPAG17Q6Q759 2223 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 RP1P56715 2156 aa1.01□□□□□ -2.25
PTPN12-212ENST00000494248 BAZ2BQ9UIF8 2168 aaKnown RBP1.01□□□□□ -2.25
PTPN12-212ENST00000494248 ATP7AQ04656 1500 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 UNC13CQ8NB66 2214 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 SPTBP11277 2137 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 ESPL1Q14674 2120 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 ETDCA0A1B0GVM5 59 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 MRPL33O75394 65 aaKnown RBP1□□□□□ -2.25
PTPN12-212ENST00000494248 KRTAP12-4P60329 112 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 DDX60LQ5H9U9 1706 aaKnown RBP1□□□□□ -2.25
PTPN12-212ENST00000494248 E9PCH4 1651 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 DEPDC5O75140 1603 aa1□□□□□ -2.25
PTPN12-212ENST00000494248 PRRC2BQ5JSZ5 2229 aaKnown RBP0.99□□□□□ -2.25
PTPN12-212ENST00000494248 QSER1Q2KHR3 1735 aa0.99□□□□□ -2.25
PTPN12-212ENST00000494248 DEFB131BA0A096LNP1 70 aa0.99□□□□□ -2.25
PTPN12-212ENST00000494248 ANGP03950 147 aaKnown RBP0.99□□□□□ -2.25
PTPN12-212ENST00000494248 DEFB103AP81534 67 aa0.99□□□□□ -2.25
PTPN12-212ENST00000494248 SAMD9LQ8IVG5 1584 aa0.99□□□□□ -2.25
PTPN12-212ENST00000494248 GPR179Q6PRD1 2367 aa0.98□□□□□ -2.25
PTPN12-212ENST00000494248 ABCA4P78363 2273 aa0.98□□□□□ -2.25
PTPN12-212ENST00000494248 SPTY2D1-AS1A0A0U1RR47 76 aa0.98□□□□□ -2.25
PTPN12-212ENST00000494248 H0YGX0 51 aa0.98□□□□□ -2.25
PTPN12-212ENST00000494248 UBE2DNLQ8IWF7 75 aa0.98□□□□□ -2.25
PTPN12-212ENST00000494248 ALPK2Q86TB3 2170 aa0.98□□□□□ -2.25
PTPN12-212ENST00000494248 FBN3Q75N90 2809 aa0.97□□□□□ -2.25
PTPN12-212ENST00000494248 PRB1P04280 392 aa0.97□□□□□ -2.25
PTPN12-212ENST00000494248 SNRPGP62308 76 aaKnown RBP0.97□□□□□ -2.25
PTPN12-212ENST00000494248 BRD3OSQ6XYD6 125 aa0.97□□□□□ -2.25
PTPN12-212ENST00000494248 KRTAP13-1Q8IUC0 172 aa0.97□□□□□ -2.25
PTPN12-212ENST00000494248 INTS1Q8N201 2190 aaKnown RBP0.97□□□□□ -2.25
PTPN12-212ENST00000494248 DOCK10Q96BY6 2186 aa0.97□□□□□ -2.25
PTPN12-212ENST00000494248 MDC1Q14676 2089 aaKnown RBP0.96□□□□□ -2.25
PTPN12-212ENST00000494248 DNAJC13O75165 2243 aa0.96□□□□□ -2.26
PTPN12-212ENST00000494248 FXYD6P3P58550 94 aa0.96□□□□□ -2.26
PTPN12-212ENST00000494248 PCOTHQ58A44 107 aa0.96□□□□□ -2.26
PTPN12-212ENST00000494248 NCOA6Q14686 2063 aaPredicted RBP0.96□□□□□ -2.26
PTPN12-212ENST00000494248 KIF21BO75037 1637 aa0.96□□□□□ -2.26
PTPN12-212ENST00000494248 PLXNB2O15031 1838 aa0.96□□□□□ -2.26
PTPN12-212ENST00000494248 SDK1Q7Z5N4 2213 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 SPINK4O60575 86 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 CRIP1P50238 77 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 USMG5Q96IX5 58 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 CRIPTQ9P021 101 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 SHANK1Q9Y566 2161 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 MROH2BQ7Z745 1585 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 C4AP0C0L4 1744 aa0.95□□□□□ -2.26
PTPN12-212ENST00000494248 DDX60Q8IY21 1712 aaKnown RBP0.95□□□□□ -2.26
PTPN12-212ENST00000494248 IQGAP1P46940 1657 aa0.94□□□□□ -2.26
PTPN12-212ENST00000494248 NDUFA3O95167 84 aa0.94□□□□□ -2.26
PTPN12-212ENST00000494248 COX6B2Q6YFQ2 88 aa0.94□□□□□ -2.26
PTPN12-212ENST00000494248 TIMM8BQ9Y5J9 83 aaPredicted RBP0.94□□□□□ -2.26
PTPN12-212ENST00000494248 FN1P02751 2386 aaKnown RBP0.93□□□□□ -2.26
PTPN12-212ENST00000494248 TOGARAM1Q9Y4F4 1720 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 K7EIL1 84 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 K7EQZ3 153 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 LYNX1P0DP58 116 aa0.93□□□□□ -2.26
PTPN12-212ENST00000494248 LINC00158P58513 81 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms