RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 LINC01620Q4KN68 170 aa7.32□□□□□ -1.24
MCF2L-231ENST00000494043 SDIM1Q6ZPB5 146 aa7.32□□□□□ -1.24
MCF2L-231ENST00000494043 CEND1Q8N111 149 aa7.32□□□□□ -1.24
MCF2L-231ENST00000494043 XAGE1AQ9HD64 81 aa7.32□□□□□ -1.24
MCF2L-231ENST00000494043 PGPEP1Q9NXJ5 209 aa7.32□□□□□ -1.24
MCF2L-231ENST00000494043 A0A096LNI7 61 aa7.31□□□□□ -1.24
MCF2L-231ENST00000494043 LOC107984156A0A0G2JMH3 177 aa7.31□□□□□ -1.24
MCF2L-231ENST00000494043 C16orf90A8MZG2 172 aa7.31□□□□□ -1.24
MCF2L-231ENST00000494043 GAGE2BQ13066 116 aa7.31□□□□□ -1.24
MCF2L-231ENST00000494043 ARL17AQ8IVW1 177 aa7.31□□□□□ -1.24
MCF2L-231ENST00000494043 DNAH5Q8TE73 4624 aa7.31□□□□□ -1.24
MCF2L-231ENST00000494043 A0A1B0GVY2 172 aa7.3□□□□□ -1.24
MCF2L-231ENST00000494043 RPL24P83731 157 aaKnown RBP7.3□□□□□ -1.24
MCF2L-231ENST00000494043 C9orf129Q5T035 196 aaKnown RBP7.3□□□□□ -1.24
MCF2L-231ENST00000494043 IGKV2-24A0A0C4DH68 120 aa7.29□□□□□ -1.24
MCF2L-231ENST00000494043 M0R143 59 aa7.29□□□□□ -1.24
MCF2L-231ENST00000494043 HINT1P49773 126 aaPredicted RBP7.29□□□□□ -1.24
MCF2L-231ENST00000494043 FXYD2P54710 66 aa7.29□□□□□ -1.24
MCF2L-231ENST00000494043 BVES-AS1Q5T3Y7 98 aa7.29□□□□□ -1.24
MCF2L-231ENST00000494043 A4D1N5 150 aa7.28□□□□□ -1.24
MCF2L-231ENST00000494043 CHTF8P0CG12 524 aa7.28□□□□□ -1.24
MCF2L-231ENST00000494043 Q8NDZ9 215 aa7.28□□□□□ -1.24
MCF2L-231ENST00000494043 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
MCF2L-231ENST00000494043 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
MCF2L-231ENST00000494043 A6NJY4 79 aa7.27□□□□□ -1.25
MCF2L-231ENST00000494043 NDUFC2O95298 119 aa7.27□□□□□ -1.25
MCF2L-231ENST00000494043 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
MCF2L-231ENST00000494043 J3QL48 77 aa7.26□□□□□ -1.25
MCF2L-231ENST00000494043 VPREB1P12018 145 aa7.26□□□□□ -1.25
MCF2L-231ENST00000494043 SPACA4Q8TDM5 124 aa7.26□□□□□ -1.25
MCF2L-231ENST00000494043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.26□□□□□ -1.25
MCF2L-231ENST00000494043 PKHD1P08F94 4074 aa7.26□□□□□ -1.25
MCF2L-231ENST00000494043 FAM168BA1KXE4 195 aa7.25□□□□□ -1.25
MCF2L-231ENST00000494043 PANO1I0J062 215 aa7.25□□□□□ -1.25
MCF2L-231ENST00000494043 BATFQ16520 125 aa7.25□□□□□ -1.25
MCF2L-231ENST00000494043 SERTAD4-AS1Q5TG53 156 aa7.25□□□□□ -1.25
MCF2L-231ENST00000494043 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 IGKV2-28A0A075B6P5 120 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 NCR3O14931 201 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 IGKV2D-28P01615 120 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 CFC1P0CG37 223 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 KRTAP10-1P60331 282 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 PRR3P79522 188 aaKnown RBP7.24□□□□□ -1.25
MCF2L-231ENST00000494043 FAM19A5Q7Z5A7 132 aaPredicted RBP7.24□□□□□ -1.25
MCF2L-231ENST00000494043 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
MCF2L-231ENST00000494043 NHP2Q9NX24 153 aaKnown RBP7.24□□□□□ -1.25
MCF2L-231ENST00000494043 DYNC1H1Q14204 4646 aaKnown RBP7.24□□□□□ -1.25
MCF2L-231ENST00000494043 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
MCF2L-231ENST00000494043 A0A1B0GWB2 263 aa7.23□□□□□ -1.25
MCF2L-231ENST00000494043 SMCPP49901 116 aaPredicted RBP7.23□□□□□ -1.25
MCF2L-231ENST00000494043 NKAPP1Q8N9T2 125 aa7.23□□□□□ -1.25
MCF2L-231ENST00000494043 SNHG12Q9BXW3 62 aa7.23□□□□□ -1.25
MCF2L-231ENST00000494043 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
MCF2L-231ENST00000494043 TRBV10-2A0A0K0K1G8 114 aa7.22□□□□□ -1.25
MCF2L-231ENST00000494043 A0A1W2PNN7 141 aa7.22□□□□□ -1.25
MCF2L-231ENST00000494043 A6NDN8 102 aa7.22□□□□□ -1.25
MCF2L-231ENST00000494043 K7ERJ3 54 aa7.22□□□□□ -1.25
MCF2L-231ENST00000494043 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
MCF2L-231ENST00000494043 RAB37Q96AX2 223 aa7.22□□□□□ -1.25
MCF2L-231ENST00000494043 M0R378 163 aa7.21□□□□□ -1.26
MCF2L-231ENST00000494043 Q6ZSA8 131 aa7.21□□□□□ -1.26
MCF2L-231ENST00000494043 DPH3Q96FX2 82 aa7.21□□□□□ -1.26
MCF2L-231ENST00000494043 A0A087WYN8 130 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 TRAV13-2A0A0B4J235 113 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 EPM2AB3EWF7 344 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 M0QXV9 152 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 FAM30AQ9NZY2 134 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 C22orf24Q9Y442 160 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 LRP1BQ9NZR2 4599 aa7.2□□□□□ -1.26
MCF2L-231ENST00000494043 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
MCF2L-231ENST00000494043 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
MCF2L-231ENST00000494043 C7orf33Q8WU49 177 aa7.19□□□□□ -1.26
MCF2L-231ENST00000494043 PRO1854Q9UHT4 67 aa7.19□□□□□ -1.26
MCF2L-231ENST00000494043 GAGE10A6NGK3 116 aa7.18□□□□□ -1.26
MCF2L-231ENST00000494043 IGLV6-57P01721 117 aa7.18□□□□□ -1.26
MCF2L-231ENST00000494043 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
MCF2L-231ENST00000494043 OR13C6PQ8NH95 151 aa7.18□□□□□ -1.26
MCF2L-231ENST00000494043 TRBV10-3A0A0K0K1G6 114 aa7.17□□□□□ -1.26
MCF2L-231ENST00000494043 LBHQ53QV2 105 aaPredicted RBP7.17□□□□□ -1.26
MCF2L-231ENST00000494043 PHF5AQ7RTV0 110 aaKnown RBP7.17□□□□□ -1.26
MCF2L-231ENST00000494043 LINC00167Q96N53 147 aa7.17□□□□□ -1.26
MCF2L-231ENST00000494043 TMEM126AQ9H061 195 aa7.17□□□□□ -1.26
MCF2L-231ENST00000494043 H7C2G1 150 aa7.16□□□□□ -1.26
MCF2L-231ENST00000494043 COL5A1-AS1Q5SY13 56 aa7.16□□□□□ -1.26
MCF2L-231ENST00000494043 SCXQ7RTU7 201 aa7.16□□□□□ -1.26
MCF2L-231ENST00000494043 CIRBP-AS1Q8TBR5 109 aa7.16□□□□□ -1.26
MCF2L-231ENST00000494043 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.26
MCF2L-231ENST00000494043 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.26
MCF2L-231ENST00000494043 RPL37AP8A6NKH3 93 aa7.14□□□□□ -1.27
MCF2L-231ENST00000494043 TAX1BP3O14907 124 aa7.14□□□□□ -1.27
MCF2L-231ENST00000494043 TSPAN13O95857 204 aa7.14□□□□□ -1.27
MCF2L-231ENST00000494043 Q1RN00 199 aa7.14□□□□□ -1.27
MCF2L-231ENST00000494043 CBY1Q9Y3M2 126 aa7.14□□□□□ -1.27
MCF2L-231ENST00000494043 TRAV23DV6A0A075B6W5 121 aa7.13□□□□□ -1.27
MCF2L-231ENST00000494043 UBE2BP63146 152 aa7.13□□□□□ -1.27
MCF2L-231ENST00000494043 HAMPP81172 84 aa7.13□□□□□ -1.27
MCF2L-231ENST00000494043 SMIM11BQ8TCY0 68 aa7.13□□□□□ -1.27
MCF2L-231ENST00000494043 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms