RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 HIST1H2BCP62807 126 aa5.73□□□□□ -1.49
SGIP1-213ENST00000493564 HIST2H2BEQ16778 126 aa5.73□□□□□ -1.49
SGIP1-213ENST00000493564 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.73□□□□□ -1.49
SGIP1-213ENST00000493564 HIST1H2BHQ93079 126 aa5.73□□□□□ -1.49
SGIP1-213ENST00000493564 HIST1H2BNQ99877 126 aa5.73□□□□□ -1.49
SGIP1-213ENST00000493564 HIST1H2BMQ99879 126 aa5.73□□□□□ -1.49
SGIP1-213ENST00000493564 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
SGIP1-213ENST00000493564 SMIM13P0DJ93 91 aa5.72□□□□□ -1.49
SGIP1-213ENST00000493564 COX17Q14061 63 aa5.72□□□□□ -1.49
SGIP1-213ENST00000493564 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
SGIP1-213ENST00000493564 DIRC1Q969H9 104 aa5.72□□□□□ -1.49
SGIP1-213ENST00000493564 TP73-AS1Q9UF72 201 aa5.72□□□□□ -1.49
SGIP1-213ENST00000493564 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
SGIP1-213ENST00000493564 H0Y9J4 135 aa5.71□□□□□ -1.5
SGIP1-213ENST00000493564 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
SGIP1-213ENST00000493564 Q8NDZ9 215 aa5.71□□□□□ -1.5
SGIP1-213ENST00000493564 IGLV5-37A0A075B6J1 123 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 ZNF861PO60384 105 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 DPM2O94777 84 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 PRR26Q8N8Z3 221 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 MAP1LC3CQ9BXW4 147 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
SGIP1-213ENST00000493564 BCE1O60756 84 aa5.69□□□□□ -1.5
SGIP1-213ENST00000493564 IGKCP01834 107 aa5.69□□□□□ -1.5
SGIP1-213ENST00000493564 VPREB1P12018 145 aa5.69□□□□□ -1.5
SGIP1-213ENST00000493564 PLNP26678 52 aa5.69□□□□□ -1.5
SGIP1-213ENST00000493564 RPL24P83731 157 aaKnown RBP5.69□□□□□ -1.5
SGIP1-213ENST00000493564 SFTA2Q6UW10 78 aa5.69□□□□□ -1.5
SGIP1-213ENST00000493564 MYMXA0A1B0GTQ4 84 aa5.68□□□□□ -1.5
SGIP1-213ENST00000493564 TMEM238C9JI98 176 aa5.68□□□□□ -1.5
SGIP1-213ENST00000493564 LEPROTO15243 131 aa5.68□□□□□ -1.5
SGIP1-213ENST00000493564 MIR7-3HGQ8N6C7 128 aa5.68□□□□□ -1.5
SGIP1-213ENST00000493564 IGLV1-50A0A075B6I6 118 aa5.67□□□□□ -1.5
SGIP1-213ENST00000493564 J3QQQ9 107 aa5.67□□□□□ -1.5
SGIP1-213ENST00000493564 HERV-K104P63124 156 aa5.67□□□□□ -1.5
SGIP1-213ENST00000493564 DAND5Q8N907 189 aa5.67□□□□□ -1.5
SGIP1-213ENST00000493564 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
SGIP1-213ENST00000493564 SYS1-DBNDD2H3BUS1 97 aa5.66□□□□□ -1.5
SGIP1-213ENST00000493564 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
SGIP1-213ENST00000493564 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
SGIP1-213ENST00000493564 UBE2AP49459 152 aa5.66□□□□□ -1.5
SGIP1-213ENST00000493564 HERVK_113P61574 105 aa5.66□□□□□ -1.5
SGIP1-213ENST00000493564 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
SGIP1-213ENST00000493564 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
SGIP1-213ENST00000493564 LGALS3P17931 250 aaKnown RBP5.65□□□□□ -1.5
SGIP1-213ENST00000493564 PRLHP81277 87 aa5.65□□□□□ -1.5
SGIP1-213ENST00000493564 FAM19A1Q7Z5A9 133 aa5.65□□□□□ -1.5
SGIP1-213ENST00000493564 ANAPC11Q9NYG5 84 aa5.65□□□□□ -1.5
SGIP1-213ENST00000493564 LINC00587B1AMM8 73 aa5.64□□□□□ -1.51
SGIP1-213ENST00000493564 M0R378 163 aa5.64□□□□□ -1.51
SGIP1-213ENST00000493564 NCR3O14931 201 aa5.64□□□□□ -1.51
SGIP1-213ENST00000493564 C3orf79P0CE67 100 aa5.64□□□□□ -1.51
SGIP1-213ENST00000493564 TMEM126AQ9H061 195 aa5.64□□□□□ -1.51
SGIP1-213ENST00000493564 KRTDAPP60985 99 aa5.63□□□□□ -1.51
SGIP1-213ENST00000493564 NPC2P61916 151 aa5.63□□□□□ -1.51
SGIP1-213ENST00000493564 LINC01545Q5VT33 79 aa5.63□□□□□ -1.51
SGIP1-213ENST00000493564 PET117Q6UWS5 81 aa5.63□□□□□ -1.51
SGIP1-213ENST00000493564 E9PLD3 99 aa5.62□□□□□ -1.51
SGIP1-213ENST00000493564 NMUP48645 174 aa5.62□□□□□ -1.51
SGIP1-213ENST00000493564 COA6Q5JTJ3 125 aaKnown RBP5.62□□□□□ -1.51
SGIP1-213ENST00000493564 ADAMTSL4-AS1Q5T5F5 129 aa5.62□□□□□ -1.51
SGIP1-213ENST00000493564 KRTAP13-1Q8IUC0 172 aa5.62□□□□□ -1.51
SGIP1-213ENST00000493564 A0A087X002 238 aa5.61□□□□□ -1.51
SGIP1-213ENST00000493564 A0A0J9YXY3 114 aa5.61□□□□□ -1.51
SGIP1-213ENST00000493564 IGKV2D-26A0A0A0MRZ7 120 aa5.6□□□□□ -1.51
SGIP1-213ENST00000493564 TRBV10-3A0A0K0K1G6 114 aa5.6□□□□□ -1.51
SGIP1-213ENST00000493564 EIF4EBP3O60516 100 aaPredicted RBP5.6□□□□□ -1.51
SGIP1-213ENST00000493564 TTTY13Q9BZ97 58 aa5.6□□□□□ -1.51
SGIP1-213ENST00000493564 CRYGAP11844 174 aa5.59□□□□□ -1.51
SGIP1-213ENST00000493564 SOSTDC1Q6X4U4 206 aa5.59□□□□□ -1.51
SGIP1-213ENST00000493564 ATOH7Q8N100 152 aa5.59□□□□□ -1.51
SGIP1-213ENST00000493564 MIEN1Q9BRT3 115 aa5.59□□□□□ -1.51
SGIP1-213ENST00000493564 HIGD2AQ9BW72 106 aa5.59□□□□□ -1.51
SGIP1-213ENST00000493564 LOC107984156A0A0G2JMH3 177 aa5.58□□□□□ -1.52
SGIP1-213ENST00000493564 TSPAN13O95857 204 aa5.58□□□□□ -1.52
SGIP1-213ENST00000493564 RPL13AP40429 203 aaKnown RBP5.58□□□□□ -1.52
SGIP1-213ENST00000493564 ARL17AQ8IVW1 177 aa5.58□□□□□ -1.52
SGIP1-213ENST00000493564 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
SGIP1-213ENST00000493564 ZNF815PA8K554 130 aa5.57□□□□□ -1.52
SGIP1-213ENST00000493564 PRYO14603 147 aa5.57□□□□□ -1.52
SGIP1-213ENST00000493564 DDTP30046 118 aa5.57□□□□□ -1.52
SGIP1-213ENST00000493564 KRTAP13-2Q52LG2 175 aa5.57□□□□□ -1.52
SGIP1-213ENST00000493564 TYMSOSQ8TAI1 123 aa5.57□□□□□ -1.52
SGIP1-213ENST00000493564 KCNQ1DNQ9H478 68 aa5.57□□□□□ -1.52
SGIP1-213ENST00000493564 C20orf202A1L168 122 aa5.56□□□□□ -1.52
SGIP1-213ENST00000493564 ANKRD39Q53RE8 183 aa5.56□□□□□ -1.52
SGIP1-213ENST00000493564 S100A7L2Q5SY68 101 aa5.56□□□□□ -1.52
SGIP1-213ENST00000493564 TRBV10-2A0A0K0K1G8 114 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 ETDCA0A1B0GVM5 59 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 S100A2P29034 98 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 SPRR1AP35321 89 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 HIST3H2BBQ8N257 126 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 LINC00308Q8TCZ7 52 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 SMCR5Q8TEV8 140 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 LITAFQ99732 161 aa5.55□□□□□ -1.52
SGIP1-213ENST00000493564 LRP2P98164 4655 aa5.54□□□□□ -1.52
SGIP1-213ENST00000493564 LPAP08519 4548 aa5.54□□□□□ -1.52
SGIP1-213ENST00000493564 KRTAP4-16G5E9R7 235 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms