RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 TEX15Q9BXT5 2789 aa11.19□□□□□ -0.62
KLF4-204ENST00000493306 LINC00612Q8N6U2 182 aa11.19□□□□□ -0.62
KLF4-204ENST00000493306 LINC01006Q8NI28 216 aa11.19□□□□□ -0.62
KLF4-204ENST00000493306 SPAG11BQ08648 103 aa11.18□□□□□ -0.62
KLF4-204ENST00000493306 SCXQ7RTU7 201 aa11.18□□□□□ -0.62
KLF4-204ENST00000493306 ACACBO00763 2458 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 DNAJC9-AS1A6NH13 148 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 MIFP14174 115 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 UNQ6190/PRO20217Q6UXQ8 127 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 LRRK2Q5S007 2527 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 TRBV7-4A0A0J9YYF1 115 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 FBN2P35556 2912 aa11.17□□□□□ -0.62
KLF4-204ENST00000493306 TRBV7-6A0A0J9YX20 115 aa11.16□□□□□ -0.62
KLF4-204ENST00000493306 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
KLF4-204ENST00000493306 UTP20O75691 2785 aaKnown RBP11.16□□□□□ -0.62
KLF4-204ENST00000493306 NREPQ16612 68 aa11.15□□□□□ -0.62
KLF4-204ENST00000493306 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.15□□□□□ -0.62
KLF4-204ENST00000493306 FN1P02751 2386 aaKnown RBP11.15□□□□□ -0.62
KLF4-204ENST00000493306 PTPN13Q12923 2485 aa11.15□□□□□ -0.62
KLF4-204ENST00000493306 CFAP46Q8IYW2 2715 aa11.15□□□□□ -0.62
KLF4-204ENST00000493306 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
KLF4-204ENST00000493306 IGHV4-30-4P0DP06 118 aa11.14□□□□□ -0.63
KLF4-204ENST00000493306 PKD1L2Q7Z442 2459 aa11.14□□□□□ -0.63
KLF4-204ENST00000493306 MYO18BQ8IUG5 2567 aa11.13□□□□□ -0.63
KLF4-204ENST00000493306 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
KLF4-204ENST00000493306 NAV2Q8IVL1 2488 aa11.13□□□□□ -0.63
KLF4-204ENST00000493306 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
KLF4-204ENST00000493306 BPY2O14599 106 aa11.12□□□□□ -0.63
KLF4-204ENST00000493306 SETD2Q9BYW2 2564 aaPredicted RBP11.12□□□□□ -0.63
KLF4-204ENST00000493306 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
KLF4-204ENST00000493306 FAM208BQ5VWN6 2430 aa11.12□□□□□ -0.63
KLF4-204ENST00000493306 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
KLF4-204ENST00000493306 CENPEQ02224 2701 aa11.12□□□□□ -0.63
KLF4-204ENST00000493306 COX7BP24311 80 aa11.11□□□□□ -0.63
KLF4-204ENST00000493306 ZNF73O43830 326 aaPredicted RBP11.1□□□□□ -0.63
KLF4-204ENST00000493306 LINC00474Q9P2X8 69 aa11.1□□□□□ -0.63
KLF4-204ENST00000493306 ERC2-IT1O76042 136 aa11.1□□□□□ -0.63
KLF4-204ENST00000493306 AKAP9Q99996 3911 aa11.1□□□□□ -0.63
KLF4-204ENST00000493306 DEFB113Q30KQ7 82 aa11.09□□□□□ -0.63
KLF4-204ENST00000493306 NIPBLQ6KC79 2804 aaeCLIP11.09□□□□□ -0.63
KLF4-204ENST00000493306 ESM1Q9NQ30 184 aa11.08□□□□□ -0.64
KLF4-204ENST00000493306 X6R8D5 127 aa11.08□□□□□ -0.64
KLF4-204ENST00000493306 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
KLF4-204ENST00000493306 XAGE1AQ9HD64 81 aa11.07□□□□□ -0.64
KLF4-204ENST00000493306 NF1P21359 2839 aa11.06□□□□□ -0.64
KLF4-204ENST00000493306 GVQW2A0A096LPI5 108 aaPredicted RBP11.06□□□□□ -0.64
KLF4-204ENST00000493306 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
KLF4-204ENST00000493306 KRTAP10-9P60411 292 aa11.06□□□□□ -0.64
KLF4-204ENST00000493306 ZFYVE26Q68DK2 2539 aa11.05□□□□□ -0.64
KLF4-204ENST00000493306 ABCA12Q86UK0 2595 aa11.05□□□□□ -0.64
KLF4-204ENST00000493306 CACNA1AO00555 2505 aa11.03□□□□□ -0.64
KLF4-204ENST00000493306 PRYO14603 147 aa11.03□□□□□ -0.64
KLF4-204ENST00000493306 Q8N9L7 120 aa11.03□□□□□ -0.64
KLF4-204ENST00000493306 C6orf48Q9UBA6 75 aa11.03□□□□□ -0.64
KLF4-204ENST00000493306 PMAIP1Q13794 54 aa11.02□□□□□ -0.64
KLF4-204ENST00000493306 IGKV4-1P06312 121 aa11.01□□□□□ -0.65
KLF4-204ENST00000493306 KLK12Q9UKR0 248 aa11.01□□□□□ -0.65
KLF4-204ENST00000493306 GCN1Q92616 2671 aaKnown RBP11.01□□□□□ -0.65
KLF4-204ENST00000493306 FUSP35637 526 aaKnown RBP eCLIP11□□□□□ -0.65
KLF4-204ENST00000493306 DAD1P61803 113 aa11□□□□□ -0.65
KLF4-204ENST00000493306 OCR1Q9BZK8 76 aa11□□□□□ -0.65
KLF4-204ENST00000493306 APCP25054 2843 aa10.99□□□□□ -0.65
KLF4-204ENST00000493306 DEFB4AO15263 64 aa10.99□□□□□ -0.65
KLF4-204ENST00000493306 LELP1Q5T871 98 aa10.99□□□□□ -0.65
KLF4-204ENST00000493306 MPLKIPQ8TAP9 179 aa10.99□□□□□ -0.65
KLF4-204ENST00000493306 PRR34Q9NV39 138 aa10.99□□□□□ -0.65
KLF4-204ENST00000493306 FAM229BQ4G0N7 80 aa10.98□□□□□ -0.65
KLF4-204ENST00000493306 HIGD2BQ4VC39 106 aa10.98□□□□□ -0.65
KLF4-204ENST00000493306 IGSF10Q6WRI0 2623 aa10.98□□□□□ -0.65
KLF4-204ENST00000493306 NBEAL2Q6ZNJ1 2754 aa10.97□□□□□ -0.65
KLF4-204ENST00000493306 ESRGQ1W209 222 aa10.97□□□□□ -0.65
KLF4-204ENST00000493306 M0R378 163 aa10.97□□□□□ -0.65
KLF4-204ENST00000493306 VPREB1P12018 145 aa10.97□□□□□ -0.65
KLF4-204ENST00000493306 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
KLF4-204ENST00000493306 CCDC168Q8NDH2 2452 aa10.95□□□□□ -0.66
KLF4-204ENST00000493306 KRTAP1-3Q8IUG1 177 aa10.95□□□□□ -0.66
KLF4-204ENST00000493306 PRR15Q8IV56 129 aa10.95□□□□□ -0.66
KLF4-204ENST00000493306 DEFB135Q30KP9 77 aa10.94□□□□□ -0.66
KLF4-204ENST00000493306 CAMK2N2Q96S95 79 aa10.94□□□□□ -0.66
KLF4-204ENST00000493306 C3orf84H3BNL1 204 aa10.94□□□□□ -0.66
KLF4-204ENST00000493306 CELA1Q9UNI1 258 aa10.94□□□□□ -0.66
KLF4-204ENST00000493306 PRB1P04280 392 aa10.93□□□□□ -0.66
KLF4-204ENST00000493306 Q6ZRU5 148 aa10.93□□□□□ -0.66
KLF4-204ENST00000493306 HIGD2AQ9BW72 106 aa10.93□□□□□ -0.66
KLF4-204ENST00000493306 ITPR3Q14573 2671 aa10.93□□□□□ -0.66
KLF4-204ENST00000493306 HTN3P15516 51 aa10.93□□□□□ -0.66
KLF4-204ENST00000493306 CD164Q04900 197 aa10.92□□□□□ -0.66
KLF4-204ENST00000493306 Q6ZTC4 211 aa10.92□□□□□ -0.66
KLF4-204ENST00000493306 EGFEM1PQ0D2K5 195 aa10.91□□□□□ -0.66
KLF4-204ENST00000493306 RETNQ9HD89 108 aa10.88□□□□□ -0.67
KLF4-204ENST00000493306 ZNF469Q96JG9 3925 aaPredicted RBP10.87□□□□□ -0.67
KLF4-204ENST00000493306 ZNF462Q96JM2 2506 aa10.86□□□□□ -0.67
KLF4-204ENST00000493306 FLNAP21333 2647 aaKnown RBP10.86□□□□□ -0.67
KLF4-204ENST00000493306 APOC4P55056 127 aa10.86□□□□□ -0.67
KLF4-204ENST00000493306 SMIM29Q86T20 159 aa10.86□□□□□ -0.67
KLF4-204ENST00000493306 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
KLF4-204ENST00000493306 FAM30AQ9NZY2 134 aa10.86□□□□□ -0.67
KLF4-204ENST00000493306 PIEZO1Q92508 2521 aa10.86□□□□□ -0.67
KLF4-204ENST00000493306 SPART-AS1P0CW21 52 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms