RNA–Protein interactions for RNA: ENST00000492826.1

GCFC2-210, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 3

Gene GCFC2, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-210	ENST00000492826	ANKRD17	O75179	2603 aa	Known RBP	-0.12	□□□□□ -2.43
GCFC2-210	ENST00000492826	TENM2	Q9NT68	2774 aa		-0.12	□□□□□ -2.43
GCFC2-210	ENST00000492826	HECTD4	Q9Y4D8	3996 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	CUX1	P39880	1505 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	LRRC37A	A6NMS7	1700 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	UBR1	Q8IWV7	1749 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	MYH4	Q9Y623	1939 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	ATR	Q13535	2644 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	NKTR	P30414	1462 aa	Known RBP	-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	TRBV7-7	A0A0K0K1E9	115 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	PKIA	P61925	76 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	ANKRD26	Q9UPS8	1709 aa		-0.13	□□□□□ -2.43
GCFC2-210	ENST00000492826	ZAN	Q9Y493	2812 aa		-0.14	□□□□□ -2.43
GCFC2-210	ENST00000492826	NSD1	Q96L73	2696 aa	Predicted RBP	-0.14	□□□□□ -2.43
GCFC2-210	ENST00000492826	SPTY2D1-AS1	A0A0U1RR47	76 aa		-0.14	□□□□□ -2.43
GCFC2-210	ENST00000492826	HMGN3	Q15651	99 aa		-0.14	□□□□□ -2.43
GCFC2-210	ENST00000492826	H1FX-AS1	Q4G0G2	97 aa		-0.14	□□□□□ -2.43
GCFC2-210	ENST00000492826	SLIT1	O75093	1534 aa		-0.14	□□□□□ -2.43
GCFC2-210	ENST00000492826	SVEP1	Q4LDE5	3571 aa		-0.14	□□□□□ -2.43
GCFC2-210	ENST00000492826	LYST	Q99698	3801 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	CRYBG1	Q9Y4K1	1723 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	ALKAL2	Q6UX46	152 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	HEPN1	Q6WQI6	88 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	SNHG12	Q9BXW3	62 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	FLG	P20930	4061 aa	Predicted RBP	-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	VPS8	Q8N3P4	1428 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	SPTA1	P02549	2419 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826	STAB1	Q9NY15	2570 aa		-0.15	□□□□□ -2.43
GCFC2-210	ENST00000492826		M0R2T5	61 aa		-0.16	□□□□□ -2.44
GCFC2-210	ENST00000492826	IGLC2	P0DOY2	106 aa		-0.16	□□□□□ -2.44
GCFC2-210	ENST00000492826	IGLC3	P0DOY3	106 aa		-0.16	□□□□□ -2.44
GCFC2-210	ENST00000492826	COL6A3	P12111	3177 aa		-0.16	□□□□□ -2.44
GCFC2-210	ENST00000492826	WNK1	Q9H4A3	2382 aa		-0.16	□□□□□ -2.44
GCFC2-210	ENST00000492826	KIAA1551	Q9HCM1	1747 aa		-0.16	□□□□□ -2.44
GCFC2-210	ENST00000492826	REV3L	O60673	3130 aa		-0.16	□□□□□ -2.44
GCFC2-210	ENST00000492826	DEFB112	Q30KQ8	113 aa		-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	SAMD9	Q5K651	1589 aa		-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	MRPL34	Q9BQ48	92 aa	Known RBP	-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	HIGD1B	Q9P298	99 aa		-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	RGPD2	P0DJD1	1756 aa		-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	IQSEC2	Q5JU85	1478 aa		-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	PKD1	P98161	4303 aa		-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	FLNA	P21333	2647 aa	Known RBP	-0.17	□□□□□ -2.44
GCFC2-210	ENST00000492826	SETX	Q7Z333	2677 aa	Known RBP	-0.18	□□□□□ -2.44
GCFC2-210	ENST00000492826	PKD1L3	Q7Z443	1732 aa		-0.18	□□□□□ -2.44
GCFC2-210	ENST00000492826	GYPA	P02724	150 aa		-0.18	□□□□□ -2.44
GCFC2-210	ENST00000492826		Q9H521	79 aa		-0.18	□□□□□ -2.44
GCFC2-210	ENST00000492826	MAP1B	P46821	2468 aa	Known RBP	-0.18	□□□□□ -2.44
GCFC2-210	ENST00000492826	SRRM2	Q9UQ35	2752 aa	Known RBP	-0.19	□□□□□ -2.44
GCFC2-210	ENST00000492826	SMIM11A	P58511	58 aa		-0.19	□□□□□ -2.44
GCFC2-210	ENST00000492826	PEA15	Q15121	130 aa		-0.19	□□□□□ -2.44
GCFC2-210	ENST00000492826	ATP10B	O94823	1461 aa		-0.19	□□□□□ -2.44
GCFC2-210	ENST00000492826	PKHD1	P08F94	4074 aa		-0.19	□□□□□ -2.44
GCFC2-210	ENST00000492826	RGPD1	P0DJD0	1748 aa		-0.19	□□□□□ -2.44
GCFC2-210	ENST00000492826	RGPD4	Q7Z3J3	1758 aa		-0.19	□□□□□ -2.44
GCFC2-210	ENST00000492826	MUC12	Q9UKN1	5478 aa		-0.2	□□□□□ -2.44
GCFC2-210	ENST00000492826	ZNF831	Q5JPB2	1677 aa		-0.2	□□□□□ -2.44
GCFC2-210	ENST00000492826	FLNB	O75369	2602 aa	Known RBP	-0.2	□□□□□ -2.44
GCFC2-210	ENST00000492826	KRTAP6-1	Q3LI64	71 aa		-0.2	□□□□□ -2.44
GCFC2-210	ENST00000492826	EPRS	P07814	1512 aa	Known RBP	-0.2	□□□□□ -2.44
GCFC2-210	ENST00000492826	RGPD3	A6NKT7	1758 aa	Predicted RBP	-0.2	□□□□□ -2.44
GCFC2-210	ENST00000492826	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	-0.2	□□□□□ -2.44
GCFC2-210	ENST00000492826	QSER1	Q2KHR3	1735 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	FANCA	O15360	1455 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	PDZD2	O15018	2839 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	NBPF19	A0A087WUL8	3843 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	CCL22	O00626	93 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	C20orf78	Q9BR46	151 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	UBR3	Q6ZT12	1888 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	CHD8	Q9HCK8	2581 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	FAT3	Q8TDW7	4589 aa		-0.21	□□□□□ -2.44
GCFC2-210	ENST00000492826	LAMA5	O15230	3695 aa		-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	BCOR	Q6W2J9	1755 aa		-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	ACAN	P16112	2415 aa		-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	EP300	Q09472	2414 aa	Predicted RBP	-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	TNRC18	O15417	2968 aa	Predicted RBP	-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	APC2	O95996	2303 aa		-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	SPRR2B	P35325	72 aa		-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	UBE2D4	Q9Y2X8	147 aa		-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	TG	P01266	2768 aa		-0.22	□□□□□ -2.44
GCFC2-210	ENST00000492826	CLIP1	P30622	1438 aa		-0.22	□□□□□ -2.45
GCFC2-210	ENST00000492826	KNL1	Q8NG31	2342 aa		-0.22	□□□□□ -2.45
GCFC2-210	ENST00000492826	TMEM131L	A2VDJ0	1609 aa		-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	HMGN2	P05204	90 aa	Known RBP	-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	DEFB135	Q30KP9	77 aa		-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	KRTAP6-2	Q3LI66	62 aa		-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	LELP1	Q5T871	98 aa		-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	KMT2C	Q8NEZ4	4911 aa	Known RBP	-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	ZZEF1	O43149	2961 aa		-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	CCNB3	Q8WWL7	1395 aa		-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	STARD9	Q9P2P6	4700 aa		-0.23	□□□□□ -2.45
GCFC2-210	ENST00000492826	POLR1A	O95602	1720 aa	Predicted RBP	-0.24	□□□□□ -2.45
GCFC2-210	ENST00000492826	SUPT6H	Q7KZ85	1726 aa	Known RBP	-0.24	□□□□□ -2.45
GCFC2-210	ENST00000492826	SCN11A	Q9UI33	1791 aa		-0.24	□□□□□ -2.45
GCFC2-210	ENST00000492826	VPS13B	Q7Z7G8	4022 aa		-0.24	□□□□□ -2.45
GCFC2-210	ENST00000492826	PKHD1L1	Q86WI1	4243 aa		-0.24	□□□□□ -2.45
GCFC2-210	ENST00000492826	PRRC2C	Q9Y520	2896 aa	Known RBP	-0.24	□□□□□ -2.45
GCFC2-210	ENST00000492826	KRTAP19-7	Q3SYF9	63 aa		-0.24	□□□□□ -2.45
GCFC2-210	ENST00000492826	CDKN2A-AS1	Q9UH64	79 aa		-0.24	□□□□□ -2.45

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms