RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	COX7B2	Q8TF08	81 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	SEC11C	Q9BY50	192 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	TP73-AS1	Q9UF72	201 aa		3.04	□□□□□ -1.92
SEC13-219	ENST00000492602	IGKV2D-26	A0A0A0MRZ7	120 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	BCE1	O60756	84 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	COX17	Q14061	63 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	KIAA0087	Q14695	138 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	CLLU1	Q5K131	121 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	FAM19A3	Q7Z5A8	133 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	KRTAP7-1	Q8IUC3	87 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	CST9L	Q9H4G1	147 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602	CDKN2A-AS1	Q9UH64	79 aa		3.03	□□□□□ -1.92
SEC13-219	ENST00000492602		A0A1B0GVG6	124 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	TMEM218	A2RU14	115 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	LINC00614	P0C842	121 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	CFC1	P0CG37	223 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	KIAA1644	Q3SXP7	199 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	XAGE1A	Q9HD64	81 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	RPS10P5	Q9NQ39	176 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	LINC00846	Q9NV44	126 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	TRAPPC1	Q9Y5R8	145 aa		3.02	□□□□□ -1.93
SEC13-219	ENST00000492602	RPL37AP8	A6NKH3	93 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	PFN2	P35080	140 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	CTAG1A	P78358	180 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	KRTAP13-2	Q52LG2	175 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	TMEM170B	Q5T4T1	132 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	COX6B2	Q6YFQ2	88 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	FP248	Q71RG6	208 aa	Predicted RBP	3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	FAM104A	Q969W3	186 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	MAP1LC3C	Q9BXW4	147 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	ANAPC11	Q9NYG5	84 aa		3.01	□□□□□ -1.93
SEC13-219	ENST00000492602	IGLV8-61	A0A075B6I0	122 aa		3	□□□□□ -1.93
SEC13-219	ENST00000492602	GAGE10	A6NGK3	116 aa		3	□□□□□ -1.93
SEC13-219	ENST00000492602	SPINK8	P0C7L1	97 aa		3	□□□□□ -1.93
SEC13-219	ENST00000492602	LINC00158	P58513	81 aa		3	□□□□□ -1.93
SEC13-219	ENST00000492602	C9orf129	Q5T035	196 aa	Known RBP	3	□□□□□ -1.93
SEC13-219	ENST00000492602	BAGE3	Q86Y29	109 aa		3	□□□□□ -1.93
SEC13-219	ENST00000492602	LINC00167	Q96N53	147 aa		3	□□□□□ -1.93
SEC13-219	ENST00000492602	CBY1	Q9Y3M2	126 aa		3	□□□□□ -1.93
SEC13-219	ENST00000492602	ZNF706	Q9Y5V0	76 aa	Predicted RBP	3	□□□□□ -1.93
SEC13-219	ENST00000492602	SMIM1	B2RUZ4	78 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	SNAPIN	O95295	136 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	HBD	P02042	147 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	FAM229B	Q4G0N7	80 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	ZC2HC1B	Q5TFG8	222 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	SPAG11A	Q6PDA7	123 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	FAM19A1	Q7Z5A9	133 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	CBLN2	Q8IUK8	224 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	SVBP	Q8N300	66 aa		2.99	□□□□□ -1.93
SEC13-219	ENST00000492602	IGKV2-28	A0A075B6P5	120 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	IGLV5-45	A0A087WSX0	123 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	LINC01546	A6NGU7	62 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	IGKV2D-28	P01615	120 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	ADCYAP1	P18509	176 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	HINT1	P49773	126 aa	Predicted RBP	2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	HERV-K104	P63124	156 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	IFITM2	Q01629	132 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	XP32	Q5T750	250 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	COMMD7	Q86VX2	200 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	NDUFA12	Q9UI09	145 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	ERG28	Q9UKR5	140 aa		2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	CHTOP	Q9Y3Y2	248 aa	Known RBP	2.98	□□□□□ -1.93
SEC13-219	ENST00000492602	IGLV5-37	A0A075B6J1	123 aa		2.97	□□□□□ -1.93
SEC13-219	ENST00000492602	MYMX	A0A1B0GTQ4	84 aa		2.97	□□□□□ -1.93
SEC13-219	ENST00000492602		M0R378	163 aa		2.97	□□□□□ -1.93
SEC13-219	ENST00000492602	IGLC3	P0DOY3	106 aa		2.97	□□□□□ -1.93
SEC13-219	ENST00000492602	MEIG1	Q5JSS6	88 aa		2.97	□□□□□ -1.93
SEC13-219	ENST00000492602	DAND5	Q8N907	189 aa		2.97	□□□□□ -1.93
SEC13-219	ENST00000492602	CHCHD1	Q96BP2	118 aa	Known RBP	2.97	□□□□□ -1.93
SEC13-219	ENST00000492602	MIEN1	Q9BRT3	115 aa		2.97	□□□□□ -1.93
SEC13-219	ENST00000492602	ETDC	A0A1B0GVM5	59 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	TRIAP1	O43715	76 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	APOC3	P02656	99 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	HERVK_113	P61574	105 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	JOSD1	Q15040	202 aa	Predicted RBP	2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	PCOTH	Q58A44	107 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	IFI27L1	Q96BM0	104 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	ZNF625	Q96I27	306 aa	Predicted RBP	2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	KRTAP9-8	Q9BYQ0	159 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	SND1-IT1	Q9HBX3	110 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	HSPB8	Q9UJY1	196 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	KMT2D	O14686	5537 aa		2.96	□□□□□ -1.94
SEC13-219	ENST00000492602	TRAV12-1	A0A0B4J245	112 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602	IGLV5-39	A0A0G2JS06	123 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602	HSBP1	O75506	76 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602	PLN	P26678	52 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602	S100A7L2	Q5SY68	101 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602	BOD1L2	Q8IYS8	172 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602	HIGD2A	Q9BW72	106 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602	TMEM126A	Q9H061	195 aa		2.95	□□□□□ -1.94
SEC13-219	ENST00000492602		H0Y8G0	127 aa		2.94	□□□□□ -1.94
SEC13-219	ENST00000492602	ZNF22	P17026	224 aa	Predicted RBP	2.94	□□□□□ -1.94
SEC13-219	ENST00000492602	KRTAP19-6	Q3LI70	58 aa		2.94	□□□□□ -1.94
SEC13-219	ENST00000492602	C10orf91	Q5T1B1	145 aa		2.94	□□□□□ -1.94
SEC13-219	ENST00000492602	SLC25A34	Q6PIV7	304 aa		2.94	□□□□□ -1.94
SEC13-219	ENST00000492602	C18orf32	Q8TCD1	76 aa		2.94	□□□□□ -1.94
SEC13-219	ENST00000492602	COPS9	Q8WXC6	57 aa		2.94	□□□□□ -1.94
SEC13-219	ENST00000492602	PLEKHB2	Q96CS7	222 aa		2.94	□□□□□ -1.94
SEC13-219	ENST00000492602		A0A0U1RRA0	63 aa		2.93	□□□□□ -1.94
SEC13-219	ENST00000492602	PRY	O14603	147 aa		2.93	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 132 ms