RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TRIAP1O43715 76 aa9.98□□□□□ -0.81
ARHGEF39-205ENST00000490638 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
ARHGEF39-205ENST00000490638 H0Y9J4 135 aa9.97□□□□□ -0.81
ARHGEF39-205ENST00000490638 C14orf132Q9NPU4 83 aa9.97□□□□□ -0.81
ARHGEF39-205ENST00000490638 Q6ZRU5 148 aa9.97□□□□□ -0.81
ARHGEF39-205ENST00000490638 ACYP1P07311 99 aa9.96□□□□□ -0.81
ARHGEF39-205ENST00000490638 C19orf73Q9NVV2 129 aa9.96□□□□□ -0.81
ARHGEF39-205ENST00000490638 DHRS4-AS1Q9P1J3 65 aa9.96□□□□□ -0.81
ARHGEF39-205ENST00000490638 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
ARHGEF39-205ENST00000490638 SMIM11BQ8TCY0 68 aa9.95□□□□□ -0.82
ARHGEF39-205ENST00000490638 CR1P17927 2039 aa9.95□□□□□ -0.82
ARHGEF39-205ENST00000490638 ZNF706Q9Y5V0 76 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF39-205ENST00000490638 CSMD1Q96PZ7 3565 aa9.95□□□□□ -0.82
ARHGEF39-205ENST00000490638 IGHV3OR16-9A0A0B4J2B5 98 aa9.95□□□□□ -0.82
ARHGEF39-205ENST00000490638 CSNK1G2-AS1Q8NCQ2 148 aa9.95□□□□□ -0.82
ARHGEF39-205ENST00000490638 IGKV3D-7A0A0C4DH55 119 aa9.94□□□□□ -0.82
ARHGEF39-205ENST00000490638 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
ARHGEF39-205ENST00000490638 LINC00588Q9Y4M8 146 aa9.94□□□□□ -0.82
ARHGEF39-205ENST00000490638 TRBV10-3A0A0K0K1G6 114 aa9.94□□□□□ -0.82
ARHGEF39-205ENST00000490638 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
ARHGEF39-205ENST00000490638 SVEP1Q4LDE5 3571 aa9.94□□□□□ -0.82
ARHGEF39-205ENST00000490638 HIVEP1P15822 2718 aa9.93□□□□□ -0.82
ARHGEF39-205ENST00000490638 NBDYA0A0U1RRE5 68 aa9.93□□□□□ -0.82
ARHGEF39-205ENST00000490638 A8MTW9 85 aa9.92□□□□□ -0.82
ARHGEF39-205ENST00000490638 SPENQ96T58 3664 aaKnown RBP9.91□□□□□ -0.82
ARHGEF39-205ENST00000490638 F8WDY8 70 aa9.91□□□□□ -0.82
ARHGEF39-205ENST00000490638 Q8N3U1 123 aa9.91□□□□□ -0.82
ARHGEF39-205ENST00000490638 IGLV9-49A0A0B4J1Y8 123 aa9.91□□□□□ -0.82
ARHGEF39-205ENST00000490638 SPINK6Q6UWN8 80 aa9.91□□□□□ -0.82
ARHGEF39-205ENST00000490638 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
ARHGEF39-205ENST00000490638 CCKP06307 115 aa9.9□□□□□ -0.82
ARHGEF39-205ENST00000490638 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.83
ARHGEF39-205ENST00000490638 LINC01561Q8N1V8 128 aa9.89□□□□□ -0.83
ARHGEF39-205ENST00000490638 MT-ATP8P03928 68 aa9.89□□□□□ -0.83
ARHGEF39-205ENST00000490638 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
ARHGEF39-205ENST00000490638 BPY2O14599 106 aa9.89□□□□□ -0.83
ARHGEF39-205ENST00000490638 ADAMTSL4-AS1Q5T5F5 129 aa9.89□□□□□ -0.83
ARHGEF39-205ENST00000490638 REG3GQ6UW15 175 aa9.87□□□□□ -0.83
ARHGEF39-205ENST00000490638 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
ARHGEF39-205ENST00000490638 NBEAL2Q6ZNJ1 2754 aa9.87□□□□□ -0.83
ARHGEF39-205ENST00000490638 HRCT1Q6UXD1 115 aa9.87□□□□□ -0.83
ARHGEF39-205ENST00000490638 A0A1B0GX51 115 aa9.86□□□□□ -0.83
ARHGEF39-205ENST00000490638 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF39-205ENST00000490638 TM2D3Q9BRN9 247 aa9.84□□□□□ -0.83
ARHGEF39-205ENST00000490638 UTP20O75691 2785 aaKnown RBP9.84□□□□□ -0.83
ARHGEF39-205ENST00000490638 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
ARHGEF39-205ENST00000490638 C3orf84H3BNL1 204 aa9.84□□□□□ -0.83
ARHGEF39-205ENST00000490638 LST1O00453 97 aa9.83□□□□□ -0.84
ARHGEF39-205ENST00000490638 IGLV5-39A0A0G2JS06 123 aa9.82□□□□□ -0.84
ARHGEF39-205ENST00000490638 ENHOQ6UWT2 76 aa9.82□□□□□ -0.84
ARHGEF39-205ENST00000490638 DNAH10OSP0CZ25 163 aa9.81□□□□□ -0.84
ARHGEF39-205ENST00000490638 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
ARHGEF39-205ENST00000490638 C16orf90A8MZG2 172 aa9.81□□□□□ -0.84
ARHGEF39-205ENST00000490638 NDUFC2O95298 119 aa9.81□□□□□ -0.84
ARHGEF39-205ENST00000490638 MP68P56378 58 aa9.8□□□□□ -0.84
ARHGEF39-205ENST00000490638 STAB2Q8WWQ8 2551 aa9.8□□□□□ -0.84
ARHGEF39-205ENST00000490638 TENM4Q6N022 2769 aa9.8□□□□□ -0.84
ARHGEF39-205ENST00000490638 SCXQ7RTU7 201 aa9.79□□□□□ -0.84
ARHGEF39-205ENST00000490638 NDUFV3P56181 108 aaKnown RBP9.79□□□□□ -0.84
ARHGEF39-205ENST00000490638 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
ARHGEF39-205ENST00000490638 APCP25054 2843 aa9.79□□□□□ -0.84
ARHGEF39-205ENST00000490638 PRLHP81277 87 aa9.79□□□□□ -0.84
ARHGEF39-205ENST00000490638 C10orf25Q5T742 122 aa9.79□□□□□ -0.84
ARHGEF39-205ENST00000490638 CIRBP-AS1Q8TBR5 109 aa9.79□□□□□ -0.84
ARHGEF39-205ENST00000490638 DCHS2Q6V1P9 2916 aa9.78□□□□□ -0.84
ARHGEF39-205ENST00000490638 RTL8CO15255 209 aa9.76□□□□□ -0.85
ARHGEF39-205ENST00000490638 XGP55808 180 aa9.76□□□□□ -0.85
ARHGEF39-205ENST00000490638 PRYO14603 147 aa9.76□□□□□ -0.85
ARHGEF39-205ENST00000490638 LINC00643Q86TS7 51 aa9.76□□□□□ -0.85
ARHGEF39-205ENST00000490638 LINC01546A6NGU7 62 aa9.75□□□□□ -0.85
ARHGEF39-205ENST00000490638 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
ARHGEF39-205ENST00000490638 Q8N814 137 aa9.74□□□□□ -0.85
ARHGEF39-205ENST00000490638 CUBNO60494 3623 aa9.74□□□□□ -0.85
ARHGEF39-205ENST00000490638 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
ARHGEF39-205ENST00000490638 UPK3BQ9BT76 320 aa9.74□□□□□ -0.85
ARHGEF39-205ENST00000490638 ZANQ9Y493 2812 aa9.74□□□□□ -0.85
ARHGEF39-205ENST00000490638 CRYBG3Q68DQ2 2970 aa9.73□□□□□ -0.85
ARHGEF39-205ENST00000490638 KMT2BQ9UMN6 2715 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF39-205ENST00000490638 LINC00167Q96N53 147 aa9.73□□□□□ -0.85
ARHGEF39-205ENST00000490638 IGKV4-1P06312 121 aa9.73□□□□□ -0.85
ARHGEF39-205ENST00000490638 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
ARHGEF39-205ENST00000490638 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
ARHGEF39-205ENST00000490638 LINC00612Q8N6U2 182 aa9.72□□□□□ -0.85
ARHGEF39-205ENST00000490638 Q9BRP9 147 aa9.7□□□□□ -0.86
ARHGEF39-205ENST00000490638 CELSR1Q9NYQ6 3014 aa9.7□□□□□ -0.86
ARHGEF39-205ENST00000490638 CHTF8P0CG12 524 aa9.7□□□□□ -0.86
ARHGEF39-205ENST00000490638 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
ARHGEF39-205ENST00000490638 SMCR5Q8TEV8 140 aa9.7□□□□□ -0.86
ARHGEF39-205ENST00000490638 A0A087WYN8 130 aa9.68□□□□□ -0.86
ARHGEF39-205ENST00000490638 GVQW2A0A096LPI5 108 aaPredicted RBP9.68□□□□□ -0.86
ARHGEF39-205ENST00000490638 ATOX1O00244 68 aa9.68□□□□□ -0.86
ARHGEF39-205ENST00000490638 SDIM1Q6ZPB5 146 aa9.67□□□□□ -0.86
ARHGEF39-205ENST00000490638 WIPF1O43516 503 aa9.67□□□□□ -0.86
ARHGEF39-205ENST00000490638 PHF5AQ7RTV0 110 aaKnown RBP9.67□□□□□ -0.86
ARHGEF39-205ENST00000490638 WFDC13Q8IUB5 93 aa9.66□□□□□ -0.86
ARHGEF39-205ENST00000490638 NIPBLQ6KC79 2804 aaeCLIP9.65□□□□□ -0.86
ARHGEF39-205ENST00000490638 Q6JHZ5 121 aa9.65□□□□□ -0.86
ARHGEF39-205ENST00000490638 LINC00575Q6W349 94 aa9.65□□□□□ -0.86
ARHGEF39-205ENST00000490638 CCDC179H3BU77 68 aa9.64□□□□□ -0.87
ARHGEF39-205ENST00000490638 PRR34Q9NV39 138 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms