RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 GAGE2EQ4V326 116 aa8.58□□□□□ -1.04
HLA-DOA-205ENST00000490305 C9orf163Q8N9P6 203 aa8.58□□□□□ -1.04
HLA-DOA-205ENST00000490305 GAGE2DQ9UEU5 116 aa8.58□□□□□ -1.04
HLA-DOA-205ENST00000490305 PRO1854Q9UHT4 67 aa8.58□□□□□ -1.04
HLA-DOA-205ENST00000490305 TRAV13-2A0A0B4J235 113 aa8.57□□□□□ -1.04
HLA-DOA-205ENST00000490305 K7ERJ3 54 aa8.57□□□□□ -1.04
HLA-DOA-205ENST00000490305 RTL8CO15255 209 aa8.57□□□□□ -1.04
HLA-DOA-205ENST00000490305 TNP2Q05952 138 aa8.56□□□□□ -1.04
HLA-DOA-205ENST00000490305 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
HLA-DOA-205ENST00000490305 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
HLA-DOA-205ENST00000490305 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
HLA-DOA-205ENST00000490305 TAX1BP3O14907 124 aa8.55□□□□□ -1.04
HLA-DOA-205ENST00000490305 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
HLA-DOA-205ENST00000490305 FRAS1Q86XX4 4008 aa8.54□□□□□ -1.04
HLA-DOA-205ENST00000490305 C16orf90A8MZG2 172 aa8.54□□□□□ -1.04
HLA-DOA-205ENST00000490305 PLA2G2DQ9UNK4 145 aa8.54□□□□□ -1.04
HLA-DOA-205ENST00000490305 IGKV2-28A0A075B6P5 120 aa8.53□□□□□ -1.04
HLA-DOA-205ENST00000490305 TRBV10-2A0A0K0K1G8 114 aa8.53□□□□□ -1.04
HLA-DOA-205ENST00000490305 C9orf118A6NHY6 69 aa8.53□□□□□ -1.04
HLA-DOA-205ENST00000490305 IGKV2D-28P01615 120 aa8.53□□□□□ -1.04
HLA-DOA-205ENST00000490305 C9orf129Q5T035 196 aaKnown RBP8.53□□□□□ -1.04
HLA-DOA-205ENST00000490305 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
HLA-DOA-205ENST00000490305 IGLV5-52A0A0A0MRZ9 124 aa8.52□□□□□ -1.05
HLA-DOA-205ENST00000490305 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
HLA-DOA-205ENST00000490305 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
HLA-DOA-205ENST00000490305 LINC00474Q9P2X8 69 aa8.52□□□□□ -1.05
HLA-DOA-205ENST00000490305 TSPAN13O95857 204 aa8.51□□□□□ -1.05
HLA-DOA-205ENST00000490305 VPREB1P12018 145 aa8.51□□□□□ -1.05
HLA-DOA-205ENST00000490305 Q1RN00 199 aa8.51□□□□□ -1.05
HLA-DOA-205ENST00000490305 SDIM1Q6ZPB5 146 aa8.51□□□□□ -1.05
HLA-DOA-205ENST00000490305 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
HLA-DOA-205ENST00000490305 TMEM126AQ9H061 195 aa8.51□□□□□ -1.05
HLA-DOA-205ENST00000490305 A0A096LNI7 61 aa8.5□□□□□ -1.05
HLA-DOA-205ENST00000490305 M0R378 163 aa8.5□□□□□ -1.05
HLA-DOA-205ENST00000490305 NCR3O14931 201 aa8.5□□□□□ -1.05
HLA-DOA-205ENST00000490305 OR13C6PQ8NH95 151 aa8.5□□□□□ -1.05
HLA-DOA-205ENST00000490305 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 H3BUT2 72 aa8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 H7C2G1 150 aa8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 PRR3P79522 188 aaKnown RBP8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 S100A7L2Q5SY68 101 aa8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 Q8NDZ9 215 aa8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 CBY1Q9Y3M2 126 aa8.49□□□□□ -1.05
HLA-DOA-205ENST00000490305 RYR2Q92736 4967 aa8.48□□□□□ -1.05
HLA-DOA-205ENST00000490305 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
HLA-DOA-205ENST00000490305 PSMB2P49721 201 aa8.48□□□□□ -1.05
HLA-DOA-205ENST00000490305 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
HLA-DOA-205ENST00000490305 LYRM7Q5U5X0 104 aa8.47□□□□□ -1.05
HLA-DOA-205ENST00000490305 A0A1W2PPM0 123 aa8.46□□□□□ -1.06
HLA-DOA-205ENST00000490305 COX6CP09669 75 aa8.46□□□□□ -1.06
HLA-DOA-205ENST00000490305 FABP2P12104 132 aa8.46□□□□□ -1.06
HLA-DOA-205ENST00000490305 NAA38Q9BRA0 125 aaKnown RBP8.46□□□□□ -1.06
HLA-DOA-205ENST00000490305 HECTD4Q9Y4D8 3996 aa8.46□□□□□ -1.06
HLA-DOA-205ENST00000490305 IGLV6-57P01721 117 aa8.45□□□□□ -1.06
HLA-DOA-205ENST00000490305 RPL28P46779 137 aaKnown RBP8.45□□□□□ -1.06
HLA-DOA-205ENST00000490305 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
HLA-DOA-205ENST00000490305 FAM19A5Q7Z5A7 132 aaPredicted RBP8.45□□□□□ -1.06
HLA-DOA-205ENST00000490305 FAM168BA1KXE4 195 aa8.44□□□□□ -1.06
HLA-DOA-205ENST00000490305 SCGB1C2P0DMR2 95 aa8.44□□□□□ -1.06
HLA-DOA-205ENST00000490305 SMIM11BQ8TCY0 68 aa8.44□□□□□ -1.06
HLA-DOA-205ENST00000490305 C22orf24Q9Y442 160 aa8.44□□□□□ -1.06
HLA-DOA-205ENST00000490305 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 A0A1B0GV90 55 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 TRIAP1O43715 76 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 CHTF8P0CG12 524 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 VAMP3Q15836 100 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
HLA-DOA-205ENST00000490305 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
HLA-DOA-205ENST00000490305 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
HLA-DOA-205ENST00000490305 DNAH11Q96DT5 4516 aa8.42□□□□□ -1.06
HLA-DOA-205ENST00000490305 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
HLA-DOA-205ENST00000490305 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
HLA-DOA-205ENST00000490305 A0A1W2PNN7 141 aa8.41□□□□□ -1.06
HLA-DOA-205ENST00000490305 M0QXV9 152 aa8.41□□□□□ -1.06
HLA-DOA-205ENST00000490305 KRTAP7-1Q8IUC3 87 aa8.41□□□□□ -1.06
HLA-DOA-205ENST00000490305 TRBV20-1A0A075B6N2 111 aa8.4□□□□□ -1.06
HLA-DOA-205ENST00000490305 GAGE10A6NGK3 116 aa8.4□□□□□ -1.06
HLA-DOA-205ENST00000490305 H0YGX0 51 aa8.4□□□□□ -1.06
HLA-DOA-205ENST00000490305 LINC00167Q96N53 147 aa8.4□□□□□ -1.06
HLA-DOA-205ENST00000490305 SPCS1Q9Y6A9 102 aa8.4□□□□□ -1.06
HLA-DOA-205ENST00000490305 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
HLA-DOA-205ENST00000490305 IGLV1-50A0A075B6I6 118 aa8.39□□□□□ -1.07
HLA-DOA-205ENST00000490305 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
HLA-DOA-205ENST00000490305 EPM2AB3EWF7 344 aa8.38□□□□□ -1.07
HLA-DOA-205ENST00000490305 K7EP34 96 aa8.38□□□□□ -1.07
HLA-DOA-205ENST00000490305 PRYO14603 147 aa8.38□□□□□ -1.07
HLA-DOA-205ENST00000490305 DIRC1Q969H9 104 aa8.38□□□□□ -1.07
HLA-DOA-205ENST00000490305 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
HLA-DOA-205ENST00000490305 A0A087WYN8 130 aa8.37□□□□□ -1.07
HLA-DOA-205ENST00000490305 PANO1I0J062 215 aa8.37□□□□□ -1.07
HLA-DOA-205ENST00000490305 ZNF73O43830 326 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOA-205ENST00000490305 C6orf99Q4VX62 202 aa8.37□□□□□ -1.07
HLA-DOA-205ENST00000490305 KMT2CQ8NEZ4 4911 aaKnown RBP8.37□□□□□ -1.07
HLA-DOA-205ENST00000490305 DNAH5Q8TE73 4624 aa8.36□□□□□ -1.07
HLA-DOA-205ENST00000490305 TRBV7-6A0A0J9YX20 115 aa8.36□□□□□ -1.07
HLA-DOA-205ENST00000490305 RPL37AP8A6NKH3 93 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms