RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 TMEM141Q96I45 108 aa2.46□□□□□ -2.02
RPN1-205ENST00000490166 MIEN1Q9BRT3 115 aa2.46□□□□□ -2.02
RPN1-205ENST00000490166 VCX2Q9H322 139 aa2.46□□□□□ -2.02
RPN1-205ENST00000490166 NXT2Q9NPJ8 142 aaKnown RBP2.46□□□□□ -2.02
RPN1-205ENST00000490166 LRP1BQ9NZR2 4599 aa2.46□□□□□ -2.02
RPN1-205ENST00000490166 TRBV27A0A0K0K1C4 114 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 HSBP1L1C9JCN9 74 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.45□□□□□ -2.02
RPN1-205ENST00000490166 K7EMI3 77 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 TSPAN13O95857 204 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 HBDP02042 147 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 UBE2AP49459 152 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 LINC01547P58512 204 aaPredicted RBP2.45□□□□□ -2.02
RPN1-205ENST00000490166 CTAG1AP78358 180 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 SPATA45Q537H7 98 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 LBHQ53QV2 105 aaPredicted RBP2.45□□□□□ -2.02
RPN1-205ENST00000490166 ZC2HC1BQ5TFG8 222 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 SPINK6Q6UWN8 80 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 C2orf82Q6UX34 121 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 UNQ6190/PRO20217Q6UXQ8 127 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 C14orf144Q96I85 54 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 C20orf78Q9BR46 151 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 XAGE1AQ9HD64 81 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 PSORS1C2Q9UIG4 136 aa2.45□□□□□ -2.02
RPN1-205ENST00000490166 A0A1W2PNN7 141 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 H0Y8G0 127 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 M0R143 59 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 ATP5LO75964 103 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 G0S2P27469 103 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 POLR2KP53803 58 aaKnown RBP2.44□□□□□ -2.02
RPN1-205ENST00000490166 ORMDL2Q53FV1 153 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 LINC01545Q5VT33 79 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 C2orf66Q6UXQ4 117 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 LINC00173Q6ZV60 143 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 ATOH7Q8N100 152 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 IFI27L1Q96BM0 104 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 C2orf48Q96LS8 159 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 SCGB3A1Q96QR1 104 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 C6orf48Q9UBA6 75 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 UQCR10Q9UDW1 63 aa2.44□□□□□ -2.02
RPN1-205ENST00000490166 HERC1Q15751 4861 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 IGLV4-3A0A075B6K6 122 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 A0A096LNJ9 63 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 A0A0U1RRA0 63 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 LINC01549A6NIU2 74 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 IGLV7-43P04211 117 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 SPINK8P0C7L1 97 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 IGLC3P0DOY3 106 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 PFN2P35080 140 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 KRTAP10-4P60372 401 aaPredicted RBP2.43□□□□□ -2.02
RPN1-205ENST00000490166 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
RPN1-205ENST00000490166 RPL32P62910 135 aaKnown RBP2.43□□□□□ -2.02
RPN1-205ENST00000490166 CIRBPQ14011 172 aaKnown RBP2.43□□□□□ -2.02
RPN1-205ENST00000490166 PMCHL2Q9BQD1 86 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 TIMM21Q9BVV7 248 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 MRPL35Q9NZE8 188 aaKnown RBP2.43□□□□□ -2.02
RPN1-205ENST00000490166 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
RPN1-205ENST00000490166 IGKV2-28A0A075B6P5 120 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 TRBV30A0A0K0K1B3 111 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 RPL37AP8A6NKH3 93 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 NDUFC2-KCTD14E9PQ53 114 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 F8WDY8 70 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 H0Y9J4 135 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 H3BRM9 83 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 IGKV2D-28P01615 120 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 RPL28P46779 137 aaKnown RBP2.42□□□□□ -2.02
RPN1-205ENST00000490166 HERVK_113P63121 156 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 SEC11AP67812 179 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 MRPS36P82909 103 aaKnown RBP2.42□□□□□ -2.02
RPN1-205ENST00000490166 SLC25A34Q6PIV7 304 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 COX7B2Q8TF08 81 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 TOMM6Q96B49 74 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 ZNF625Q96I27 306 aaPredicted RBP2.42□□□□□ -2.02
RPN1-205ENST00000490166 LINC01600Q96MT4 127 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 SNHG12Q9BXW3 62 aa2.42□□□□□ -2.02
RPN1-205ENST00000490166 TRAV12-1A0A0B4J245 112 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 F8VRH5 84 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 DPM2O94777 84 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 COX8AP10176 69 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 PLNP26678 52 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 SRSF9Q13242 221 aaKnown RBP eCLIP2.41□□□□□ -2.02
RPN1-205ENST00000490166 MEIG1Q5JSS6 88 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 COL5A1-AS1Q5SY13 56 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 TMEM170BQ5T4T1 132 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 LINC00242Q5T6M2 205 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 ERASQ7Z444 233 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 FAM19A1Q7Z5A9 133 aa2.41□□□□□ -2.02
RPN1-205ENST00000490166 CSDC2Q9Y534 153 aaKnown RBP2.41□□□□□ -2.02
RPN1-205ENST00000490166 IGKV2D-26A0A0A0MRZ7 120 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 IGIPA6NJ69 53 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 DLEU1O43261 78 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 IGKCP01834 107 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 CFC1BP0CG36 223 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 CFC1P0CG37 223 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 MT1HL1P0DM35 61 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 RPL13AP40429 203 aaKnown RBP2.4□□□□□ -2.03
RPN1-205ENST00000490166 CXCL5P42830 114 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 LINC00158P58513 81 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 BATFQ16520 125 aa2.4□□□□□ -2.03
RPN1-205ENST00000490166 NOTCH2NLQ7Z3S9 236 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms