RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 RPL28P46779 137 aaKnown RBP11.64□□□□□ -0.55
APTX-229ENST00000489583 PET117Q6UWS5 81 aa11.64□□□□□ -0.55
APTX-229ENST00000489583 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
APTX-229ENST00000489583 CXCL5P42830 114 aa11.63□□□□□ -0.55
APTX-229ENST00000489583 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
APTX-229ENST00000489583 HIST3H2BBQ8N257 126 aa11.63□□□□□ -0.55
APTX-229ENST00000489583 COX7B2Q8TF08 81 aa11.63□□□□□ -0.55
APTX-229ENST00000489583 TSPAN13O95857 204 aa11.62□□□□□ -0.55
APTX-229ENST00000489583 IGKCP01834 107 aa11.62□□□□□ -0.55
APTX-229ENST00000489583 KRTDAPP60985 99 aa11.62□□□□□ -0.55
APTX-229ENST00000489583 XAGE1AQ9HD64 81 aa11.62□□□□□ -0.55
APTX-229ENST00000489583 C20orf202A1L168 122 aa11.61□□□□□ -0.55
APTX-229ENST00000489583 SNRPEP62304 92 aaKnown RBP11.61□□□□□ -0.55
APTX-229ENST00000489583 C3orf79P0CE67 100 aa11.6□□□□□ -0.55
APTX-229ENST00000489583 MRPL55Q7Z7F7 128 aaKnown RBP11.6□□□□□ -0.55
APTX-229ENST00000489583 PMCHL2Q9BQD1 86 aa11.6□□□□□ -0.55
APTX-229ENST00000489583 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
APTX-229ENST00000489583 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
APTX-229ENST00000489583 CRYGAP11844 174 aa11.59□□□□□ -0.55
APTX-229ENST00000489583 HERVK_113P61574 105 aa11.59□□□□□ -0.55
APTX-229ENST00000489583 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
APTX-229ENST00000489583 TP73-AS1Q9UF72 201 aa11.59□□□□□ -0.55
APTX-229ENST00000489583 C5orf52A6NGY3 159 aa11.58□□□□□ -0.56
APTX-229ENST00000489583 AKR1D1P51857 326 aa11.58□□□□□ -0.56
APTX-229ENST00000489583 LINC01545Q5VT33 79 aa11.58□□□□□ -0.56
APTX-229ENST00000489583 TYMSOSQ8TAI1 123 aa11.58□□□□□ -0.56
APTX-229ENST00000489583 SFTA2Q6UW10 78 aa11.57□□□□□ -0.56
APTX-229ENST00000489583 BCE1O60756 84 aa11.56□□□□□ -0.56
APTX-229ENST00000489583 UBE2AP49459 152 aa11.53□□□□□ -0.56
APTX-229ENST00000489583 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
APTX-229ENST00000489583 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.57
APTX-229ENST00000489583 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
APTX-229ENST00000489583 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
APTX-229ENST00000489583 LEPROTO15243 131 aa11.5□□□□□ -0.57
APTX-229ENST00000489583 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
APTX-229ENST00000489583 LINC00167Q96N53 147 aa11.49□□□□□ -0.57
APTX-229ENST00000489583 LGALS3P17931 250 aaKnown RBP11.48□□□□□ -0.57
APTX-229ENST00000489583 A0A087X002 238 aa11.47□□□□□ -0.57
APTX-229ENST00000489583 MYMXA0A1B0GTQ4 84 aa11.47□□□□□ -0.57
APTX-229ENST00000489583 E9PLD3 99 aa11.47□□□□□ -0.57
APTX-229ENST00000489583 J3QQQ9 107 aa11.47□□□□□ -0.57
APTX-229ENST00000489583 HERV-K104P63124 156 aa11.47□□□□□ -0.57
APTX-229ENST00000489583 MUC2Q02817 5179 aa11.46□□□□□ -0.57
APTX-229ENST00000489583 NMUP48645 174 aa11.46□□□□□ -0.57
APTX-229ENST00000489583 ZNF625Q96I27 306 aaPredicted RBP11.46□□□□□ -0.57
APTX-229ENST00000489583 NDUFA12Q9UI09 145 aa11.46□□□□□ -0.57
APTX-229ENST00000489583 LINC00587B1AMM8 73 aa11.45□□□□□ -0.58
APTX-229ENST00000489583 COX17Q14061 63 aa11.45□□□□□ -0.58
APTX-229ENST00000489583 ERG28Q9UKR5 140 aa11.45□□□□□ -0.58
APTX-229ENST00000489583 IGKV2D-26A0A0A0MRZ7 120 aa11.44□□□□□ -0.58
APTX-229ENST00000489583 SCGB1D1O95968 90 aa11.43□□□□□ -0.58
APTX-229ENST00000489583 PFN2P35080 140 aa11.43□□□□□ -0.58
APTX-229ENST00000489583 ATOH7Q8N100 152 aa11.43□□□□□ -0.58
APTX-229ENST00000489583 HSBP1L1C9JCN9 74 aa11.42□□□□□ -0.58
APTX-229ENST00000489583 TSPEAR-AS2P59090 65 aa11.42□□□□□ -0.58
APTX-229ENST00000489583 FAM229BQ4G0N7 80 aa11.42□□□□□ -0.58
APTX-229ENST00000489583 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
APTX-229ENST00000489583 LINC00304Q8N9R0 145 aa11.42□□□□□ -0.58
APTX-229ENST00000489583 CDIP1Q9H305 208 aa11.42□□□□□ -0.58
APTX-229ENST00000489583 ANAPC11Q9NYG5 84 aa11.41□□□□□ -0.58
APTX-229ENST00000489583 IGLV5-37A0A075B6J1 123 aa11.4□□□□□ -0.58
APTX-229ENST00000489583 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.58
APTX-229ENST00000489583 IGKV2D-28P01615 120 aa11.4□□□□□ -0.58
APTX-229ENST00000489583 LINC00158P58513 81 aa11.4□□□□□ -0.58
APTX-229ENST00000489583 RPL24P83731 157 aaKnown RBP11.37□□□□□ -0.59
APTX-229ENST00000489583 FAM19A1Q7Z5A9 133 aa11.37□□□□□ -0.59
APTX-229ENST00000489583 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
APTX-229ENST00000489583 SMIM13P0DJ93 91 aa11.36□□□□□ -0.59
APTX-229ENST00000489583 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
APTX-229ENST00000489583 ZNF815PA8K554 130 aa11.35□□□□□ -0.59
APTX-229ENST00000489583 CTAG1AP78358 180 aa11.35□□□□□ -0.59
APTX-229ENST00000489583 ANKRD39Q53RE8 183 aa11.35□□□□□ -0.59
APTX-229ENST00000489583 KRTAP13-2Q52LG2 175 aa11.34□□□□□ -0.59
APTX-229ENST00000489583 SND1-IT1Q9HBX3 110 aa11.34□□□□□ -0.59
APTX-229ENST00000489583 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.6
APTX-229ENST00000489583 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.6
APTX-229ENST00000489583 KRTAP13-1Q8IUC0 172 aa11.33□□□□□ -0.6
APTX-229ENST00000489583 A0A0J9YXY3 114 aa11.32□□□□□ -0.6
APTX-229ENST00000489583 PRLHP81277 87 aa11.32□□□□□ -0.6
APTX-229ENST00000489583 MIR7-3HGQ8N6C7 128 aa11.32□□□□□ -0.6
APTX-229ENST00000489583 TPRXLQ17RH7 258 aa11.31□□□□□ -0.6
APTX-229ENST00000489583 KRTAP9-2Q9BYQ4 174 aa11.31□□□□□ -0.6
APTX-229ENST00000489583 TMEM126AQ9H061 195 aa11.31□□□□□ -0.6
APTX-229ENST00000489583 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
APTX-229ENST00000489583 C4orf48Q5BLP8 95 aa11.29□□□□□ -0.6
APTX-229ENST00000489583 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
APTX-229ENST00000489583 TIMM17BO60830 172 aa11.28□□□□□ -0.6
APTX-229ENST00000489583 TTTY13Q9BZ97 58 aa11.28□□□□□ -0.6
APTX-229ENST00000489583 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
APTX-229ENST00000489583 SPAG11AQ6PDA7 123 aa11.27□□□□□ -0.61
APTX-229ENST00000489583 VAMP8Q9BV40 100 aa11.27□□□□□ -0.61
APTX-229ENST00000489583 VPREB1P12018 145 aa11.26□□□□□ -0.61
APTX-229ENST00000489583 PCP2Q8IVA1 136 aa11.26□□□□□ -0.61
APTX-229ENST00000489583 HIGD2AQ9BW72 106 aa11.26□□□□□ -0.61
APTX-229ENST00000489583 DAND5Q8N907 189 aa11.25□□□□□ -0.61
APTX-229ENST00000489583 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
APTX-229ENST00000489583 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
APTX-229ENST00000489583 LINC00337Q8N6G1 96 aa11.24□□□□□ -0.61
APTX-229ENST00000489583 PPDPFQ9H3Y8 114 aa11.24□□□□□ -0.61
APTX-229ENST00000489583 PAM16Q9Y3D7 125 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms