RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 H0YGX0 51 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 ZNF561-AS1K7EIQ3 104 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 NANOS2P60321 138 aaKnown RBP4.33□□□□□ -1.72
SF3A3-208ENST00000489537 FOXI1Q12951 378 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 ADAMTSL4-AS1Q5T5F5 129 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 C2orf48Q96LS8 159 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 UPK3BQ9BT76 320 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 SND1-IT1Q9HBX3 110 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 RETNQ9HD89 108 aa4.33□□□□□ -1.72
SF3A3-208ENST00000489537 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 LYSTQ99698 3801 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 GAGE12HA6NDE8 117 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 H3BMG7 143 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 H3BQ85 93 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 SPAG11BQ08648 103 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 MIR7-3HGQ8N6C7 128 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 UBE2WQ96B02 151 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 STAB2Q8WWQ8 2551 aa4.32□□□□□ -1.72
SF3A3-208ENST00000489537 A0A1B0GX51 115 aa4.31□□□□□ -1.72
SF3A3-208ENST00000489537 NUPR2A6NF83 97 aa4.31□□□□□ -1.72
SF3A3-208ENST00000489537 H3BT86 120 aa4.31□□□□□ -1.72
SF3A3-208ENST00000489537 RPL13AP40429 203 aaKnown RBP4.31□□□□□ -1.72
SF3A3-208ENST00000489537 ESRGQ1W209 222 aa4.31□□□□□ -1.72
SF3A3-208ENST00000489537 ENHOQ6UWT2 76 aa4.31□□□□□ -1.72
SF3A3-208ENST00000489537 LINC01600Q96MT4 127 aa4.31□□□□□ -1.72
SF3A3-208ENST00000489537 TMEM126AQ9H061 195 aa4.31□□□□□ -1.72
SF3A3-208ENST00000489537 IGLV10-54A0A075B6I4 117 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 TRACP01848 142 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 PFN2P35080 140 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 RPL28P46779 137 aaKnown RBP4.3□□□□□ -1.72
SF3A3-208ENST00000489537 KIAA0087Q14695 138 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 RNF151Q2KHN1 245 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 OCIAD2Q56VL3 154 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 CLPSL2Q6UWE3 100 aa4.3□□□□□ -1.72
SF3A3-208ENST00000489537 H7C2G1 150 aa4.29□□□□□ -1.72
SF3A3-208ENST00000489537 C21orf62-AS1Q17RA5 79 aa4.29□□□□□ -1.72
SF3A3-208ENST00000489537 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
SF3A3-208ENST00000489537 TTC32Q5I0X7 151 aa4.29□□□□□ -1.72
SF3A3-208ENST00000489537 WFDC10BQ8IUB3 73 aa4.29□□□□□ -1.72
SF3A3-208ENST00000489537 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
SF3A3-208ENST00000489537 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
SF3A3-208ENST00000489537 IGKV2D-24A0A075B6R9 120 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 A0A0U1RRA0 63 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 LST1O00453 97 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 TRIAP1O43715 76 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 TCL1BO95988 128 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 DNAL4O96015 105 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 LINC01620Q4KN68 170 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 TEN1Q86WV5 123 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 DAND5Q8N907 189 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 CAMK2N2Q96S95 79 aa4.28□□□□□ -1.72
SF3A3-208ENST00000489537 SLC25A20O43772 301 aa4.27□□□□□ -1.73
SF3A3-208ENST00000489537 NPC2P61916 151 aa4.27□□□□□ -1.73
SF3A3-208ENST00000489537 S100A7L2Q5SY68 101 aa4.27□□□□□ -1.73
SF3A3-208ENST00000489537 ANKRD29Q8N6D5 301 aa4.27□□□□□ -1.73
SF3A3-208ENST00000489537 OR13C6PQ8NH95 151 aa4.27□□□□□ -1.73
SF3A3-208ENST00000489537 PPDPFLQ8WWR9 84 aa4.27□□□□□ -1.73
SF3A3-208ENST00000489537 C9JAW5 83 aa4.26□□□□□ -1.73
SF3A3-208ENST00000489537 SOSTDC1Q6X4U4 206 aa4.26□□□□□ -1.73
SF3A3-208ENST00000489537 UBE2DNLQ8IWF7 75 aa4.26□□□□□ -1.73
SF3A3-208ENST00000489537 PRO0461Q9UI25 63 aa4.26□□□□□ -1.73
SF3A3-208ENST00000489537 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
SF3A3-208ENST00000489537 ALMS1Q8TCU4 4167 aa4.26□□□□□ -1.73
SF3A3-208ENST00000489537 TRBV7-6A0A0J9YX20 115 aa4.25□□□□□ -1.73
SF3A3-208ENST00000489537 NDUFC2-KCTD14E9PQ53 114 aa4.25□□□□□ -1.73
SF3A3-208ENST00000489537 TLX1NBP0CAT3 122 aa4.25□□□□□ -1.73
SF3A3-208ENST00000489537 INAFM2P0DMQ5 153 aa4.25□□□□□ -1.73
SF3A3-208ENST00000489537 SYCNQ0VAF6 134 aa4.25□□□□□ -1.73
SF3A3-208ENST00000489537 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
SF3A3-208ENST00000489537 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
SF3A3-208ENST00000489537 ACYP1P07311 99 aa4.24□□□□□ -1.73
SF3A3-208ENST00000489537 WFDC2Q14508 124 aa4.24□□□□□ -1.73
SF3A3-208ENST00000489537 UNQ6190/PRO20217Q6UXQ8 127 aa4.24□□□□□ -1.73
SF3A3-208ENST00000489537 LINC00337Q8N6G1 96 aa4.24□□□□□ -1.73
SF3A3-208ENST00000489537 VPS25Q9BRG1 176 aa4.24□□□□□ -1.73
SF3A3-208ENST00000489537 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
SF3A3-208ENST00000489537 FRAS1Q86XX4 4008 aa4.23□□□□□ -1.73
SF3A3-208ENST00000489537 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
SF3A3-208ENST00000489537 M0R378 163 aa4.23□□□□□ -1.73
SF3A3-208ENST00000489537 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
SF3A3-208ENST00000489537 KRTAP26-1Q6PEX3 210 aa4.23□□□□□ -1.73
SF3A3-208ENST00000489537 APLNQ9ULZ1 77 aa4.23□□□□□ -1.73
SF3A3-208ENST00000489537 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 FAM240AA0A1B0GVK7 77 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 TMEM256-PLSCR3K7ERE1 68 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 PSCAO43653 123 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 SMIM11BQ8TCY0 68 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 Q9HAA7 133 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 ORMDL1Q9P0S3 153 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 C6orf48Q9UBA6 75 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 VPS13DQ5THJ4 4388 aa4.22□□□□□ -1.73
SF3A3-208ENST00000489537 LOC107984640A0A0U1RRK4 108 aa4.21□□□□□ -1.74
SF3A3-208ENST00000489537 JMJD7-PLA2G4BH0Y9G9 81 aa4.21□□□□□ -1.74
SF3A3-208ENST00000489537 IGLV6-57P01721 117 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms