RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 DAND5Q8N907 189 aa5.12□□□□□ -1.59
SMC6-209ENST00000489535 C15orf56Q8N910 161 aa5.12□□□□□ -1.59
SMC6-209ENST00000489535 LINC00526Q96FQ7 95 aa5.12□□□□□ -1.59
SMC6-209ENST00000489535 TENM2Q9NT68 2774 aa5.11□□□□□ -1.59
SMC6-209ENST00000489535 NBDYA0A0U1RRE5 68 aa5.11□□□□□ -1.59
SMC6-209ENST00000489535 PFN2P35080 140 aa5.11□□□□□ -1.59
SMC6-209ENST00000489535 LINC00158P58513 81 aa5.11□□□□□ -1.59
SMC6-209ENST00000489535 TTC32Q5I0X7 151 aa5.11□□□□□ -1.59
SMC6-209ENST00000489535 Q6ZVH6 145 aa5.11□□□□□ -1.59
SMC6-209ENST00000489535 NHP2Q9NX24 153 aaKnown RBP5.11□□□□□ -1.59
SMC6-209ENST00000489535 ERG28Q9UKR5 140 aa5.11□□□□□ -1.59
SMC6-209ENST00000489535 IFITM1P13164 125 aa5.1□□□□□ -1.59
SMC6-209ENST00000489535 MT3P25713 68 aa5.1□□□□□ -1.59
SMC6-209ENST00000489535 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
SMC6-209ENST00000489535 CASC10Q5T4H9 136 aa5.1□□□□□ -1.59
SMC6-209ENST00000489535 UNQ6190/PRO20217Q6UXQ8 127 aa5.1□□□□□ -1.59
SMC6-209ENST00000489535 MIR7-3HGQ8N6C7 128 aa5.1□□□□□ -1.59
SMC6-209ENST00000489535 KMT2AQ03164 3969 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 GVQW2A0A096LPI5 108 aaPredicted RBP5.09□□□□□ -1.59
SMC6-209ENST00000489535 A4D1N5 150 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 USP17L23D6RBM5 183 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 K7ERJ3 54 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 PSCAO43653 123 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 C10orf25Q5T742 122 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 LINC00308Q8TCZ7 52 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 COPS9Q8WXC6 57 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 RAB37Q96AX2 223 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 C2orf48Q96LS8 159 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 CAMK2N2Q96S95 79 aa5.09□□□□□ -1.59
SMC6-209ENST00000489535 FBN3Q75N90 2809 aa5.08□□□□□ -1.6
SMC6-209ENST00000489535 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
SMC6-209ENST00000489535 M0R2N4 97 aa5.08□□□□□ -1.6
SMC6-209ENST00000489535 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
SMC6-209ENST00000489535 C9orf116Q5BN46 136 aaPredicted RBP5.08□□□□□ -1.6
SMC6-209ENST00000489535 SOSTDC1Q6X4U4 206 aa5.08□□□□□ -1.6
SMC6-209ENST00000489535 C6orf48Q9UBA6 75 aa5.08□□□□□ -1.6
SMC6-209ENST00000489535 TGP01266 2768 aa5.08□□□□□ -1.6
SMC6-209ENST00000489535 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.07□□□□□ -1.6
SMC6-209ENST00000489535 TRBV30A0A0K0K1B3 111 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 A0A1B0GV90 55 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 A0A1B0GWB2 263 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 F8WDY8 70 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 C3orf84H3BNL1 204 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 LECT2O14960 151 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 CFC1BP0CG36 223 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 CFC1P0CG37 223 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 COX17Q14061 63 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 Q6ZRU5 148 aa5.07□□□□□ -1.6
SMC6-209ENST00000489535 HYDINQ4G0P3 5121 aa5.06□□□□□ -1.6
SMC6-209ENST00000489535 DNAH2Q9P225 4427 aa5.06□□□□□ -1.6
SMC6-209ENST00000489535 LY6G6CO95867 125 aa5.06□□□□□ -1.6
SMC6-209ENST00000489535 SYCNQ0VAF6 134 aa5.06□□□□□ -1.6
SMC6-209ENST00000489535 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
SMC6-209ENST00000489535 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
SMC6-209ENST00000489535 WFDC2Q14508 124 aa5.05□□□□□ -1.6
SMC6-209ENST00000489535 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
SMC6-209ENST00000489535 NAA38Q9BRA0 125 aaKnown RBP5.05□□□□□ -1.6
SMC6-209ENST00000489535 SND1-IT1Q9HBX3 110 aa5.05□□□□□ -1.6
SMC6-209ENST00000489535 PRO1854Q9UHT4 67 aa5.05□□□□□ -1.6
SMC6-209ENST00000489535 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
SMC6-209ENST00000489535 DNAH17Q9UFH2 4485 aa5.04□□□□□ -1.6
SMC6-209ENST00000489535 H3BUT2 72 aa5.04□□□□□ -1.6
SMC6-209ENST00000489535 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
SMC6-209ENST00000489535 LOC107984156A0A0G2JMH3 177 aa5.03□□□□□ -1.6
SMC6-209ENST00000489535 TSPAN13O95857 204 aa5.03□□□□□ -1.6
SMC6-209ENST00000489535 RPL13AP40429 203 aaKnown RBP5.03□□□□□ -1.6
SMC6-209ENST00000489535 C14orf177Q52M58 125 aa5.03□□□□□ -1.6
SMC6-209ENST00000489535 Q6ZR54 194 aa5.03□□□□□ -1.6
SMC6-209ENST00000489535 ARL17AQ8IVW1 177 aa5.03□□□□□ -1.6
SMC6-209ENST00000489535 LRCOL1A6NCL2 159 aa5.02□□□□□ -1.61
SMC6-209ENST00000489535 NDUFC2-KCTD14E9PQ53 114 aa5.02□□□□□ -1.61
SMC6-209ENST00000489535 H7C2G1 150 aa5.02□□□□□ -1.61
SMC6-209ENST00000489535 RPL18AQ02543 176 aaKnown RBP5.02□□□□□ -1.61
SMC6-209ENST00000489535 Q1RN00 199 aa5.02□□□□□ -1.61
SMC6-209ENST00000489535 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.01□□□□□ -1.61
SMC6-209ENST00000489535 A0A1W2PPM0 123 aa5.01□□□□□ -1.61
SMC6-209ENST00000489535 NDUFC2O95298 119 aa5.01□□□□□ -1.61
SMC6-209ENST00000489535 VAMP3Q15836 100 aa5.01□□□□□ -1.61
SMC6-209ENST00000489535 GAGE2EQ4V326 116 aa5.01□□□□□ -1.61
SMC6-209ENST00000489535 Q6ZRP5 223 aa5.01□□□□□ -1.61
SMC6-209ENST00000489535 XAGE1AQ9HD64 81 aa5.01□□□□□ -1.61
SMC6-209ENST00000489535 GAGE2DQ9UEU5 116 aa5.01□□□□□ -1.61
SMC6-209ENST00000489535 IGKV2-28A0A075B6P5 120 aa5□□□□□ -1.61
SMC6-209ENST00000489535 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
SMC6-209ENST00000489535 LOC107984640A0A0U1RRK4 108 aa5□□□□□ -1.61
SMC6-209ENST00000489535 NCR3O14931 201 aa5□□□□□ -1.61
SMC6-209ENST00000489535 IGKV2D-28P01615 120 aa5□□□□□ -1.61
SMC6-209ENST00000489535 TLX1NBP0CAT3 122 aa5□□□□□ -1.61
SMC6-209ENST00000489535 FABP2P12104 132 aa5□□□□□ -1.61
SMC6-209ENST00000489535 PSMB2P49721 201 aa5□□□□□ -1.61
SMC6-209ENST00000489535 C1orf134Q5TEV5 83 aa5□□□□□ -1.61
SMC6-209ENST00000489535 LINC00337Q8N6G1 96 aa5□□□□□ -1.61
SMC6-209ENST00000489535 SACSQ9NZJ4 4579 aa5□□□□□ -1.61
SMC6-209ENST00000489535 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
SMC6-209ENST00000489535 Q8NDZ9 215 aa4.99□□□□□ -1.61
SMC6-209ENST00000489535 OR13C6PQ8NH95 151 aa4.99□□□□□ -1.61
SMC6-209ENST00000489535 A0A087WTM6 91 aa4.98□□□□□ -1.61
SMC6-209ENST00000489535 PRR3P79522 188 aaKnown RBP4.98□□□□□ -1.61
SMC6-209ENST00000489535 GAGE2BQ13066 116 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms