RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 HIST1H2BNQ99877 126 aa5.47□□□□□ -1.53
SNX17-207ENST00000489402 HIST1H2BMQ99879 126 aa5.47□□□□□ -1.53
SNX17-207ENST00000489402 RETNLBQ9BQ08 111 aa5.47□□□□□ -1.53
SNX17-207ENST00000489402 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
SNX17-207ENST00000489402 ATP5LO75964 103 aa5.46□□□□□ -1.54
SNX17-207ENST00000489402 SPINK8P0C7L1 97 aa5.46□□□□□ -1.54
SNX17-207ENST00000489402 COX19Q49B96 90 aa5.46□□□□□ -1.54
SNX17-207ENST00000489402 KRTAP13-2Q52LG2 175 aa5.46□□□□□ -1.54
SNX17-207ENST00000489402 KRTAP13-1Q8IUC0 172 aa5.46□□□□□ -1.54
SNX17-207ENST00000489402 CDIP1Q9H305 208 aa5.46□□□□□ -1.54
SNX17-207ENST00000489402 IGKV2-28A0A075B6P5 120 aa5.45□□□□□ -1.54
SNX17-207ENST00000489402 H3BRM9 83 aa5.45□□□□□ -1.54
SNX17-207ENST00000489402 IGKV2D-28P01615 120 aa5.45□□□□□ -1.54
SNX17-207ENST00000489402 SNRPEP62304 92 aaKnown RBP5.45□□□□□ -1.54
SNX17-207ENST00000489402 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
SNX17-207ENST00000489402 KIAA1644Q3SXP7 199 aa5.45□□□□□ -1.54
SNX17-207ENST00000489402 COA6Q5JTJ3 125 aaKnown RBP5.45□□□□□ -1.54
SNX17-207ENST00000489402 GNB1LQ9BYB4 327 aa5.45□□□□□ -1.54
SNX17-207ENST00000489402 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
SNX17-207ENST00000489402 S100A6P06703 90 aa5.44□□□□□ -1.54
SNX17-207ENST00000489402 CTAG1AP78358 180 aa5.44□□□□□ -1.54
SNX17-207ENST00000489402 PRLHP81277 87 aa5.44□□□□□ -1.54
SNX17-207ENST00000489402 FAM19A1Q7Z5A9 133 aa5.44□□□□□ -1.54
SNX17-207ENST00000489402 CST9LQ9H4G1 147 aa5.44□□□□□ -1.54
SNX17-207ENST00000489402 TRAPPC1Q9Y5R8 145 aa5.44□□□□□ -1.54
SNX17-207ENST00000489402 PFN2P35080 140 aa5.43□□□□□ -1.54
SNX17-207ENST00000489402 FABP9Q0Z7S8 132 aa5.43□□□□□ -1.54
SNX17-207ENST00000489402 PMVKQ15126 192 aa5.43□□□□□ -1.54
SNX17-207ENST00000489402 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
SNX17-207ENST00000489402 NDUFA6P56556 154 aa5.42□□□□□ -1.54
SNX17-207ENST00000489402 RPL24P83731 157 aaKnown RBP5.42□□□□□ -1.54
SNX17-207ENST00000489402 TMEM126AQ9H061 195 aa5.42□□□□□ -1.54
SNX17-207ENST00000489402 TMEM238LA0A1B0GVL6 79 aa5.41□□□□□ -1.54
SNX17-207ENST00000489402 FA2HQ7L5A8 372 aa5.41□□□□□ -1.54
SNX17-207ENST00000489402 HIST3H2BBQ8N257 126 aa5.41□□□□□ -1.54
SNX17-207ENST00000489402 ERG28Q9UKR5 140 aa5.41□□□□□ -1.54
SNX17-207ENST00000489402 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
SNX17-207ENST00000489402 LINC01546A6NGU7 62 aa5.4□□□□□ -1.54
SNX17-207ENST00000489402 TMEM238C9JI98 176 aa5.4□□□□□ -1.54
SNX17-207ENST00000489402 VPREB1P12018 145 aa5.4□□□□□ -1.54
SNX17-207ENST00000489402 COX17Q14061 63 aa5.4□□□□□ -1.54
SNX17-207ENST00000489402 SND1-IT1Q9HBX3 110 aa5.4□□□□□ -1.54
SNX17-207ENST00000489402 IGLV5-39A0A0G2JS06 123 aa5.39□□□□□ -1.55
SNX17-207ENST00000489402 IGLC3P0DOY3 106 aa5.39□□□□□ -1.55
SNX17-207ENST00000489402 HIGD2AQ9BW72 106 aa5.39□□□□□ -1.55
SNX17-207ENST00000489402 PPDPFQ9H3Y8 114 aa5.39□□□□□ -1.55
SNX17-207ENST00000489402 M0R378 163 aa5.38□□□□□ -1.55
SNX17-207ENST00000489402 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
SNX17-207ENST00000489402 SFTA2Q6UW10 78 aa5.38□□□□□ -1.55
SNX17-207ENST00000489402 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
SNX17-207ENST00000489402 C3orf22Q8N5N4 141 aa5.38□□□□□ -1.55
SNX17-207ENST00000489402 Q8NDZ9 215 aa5.38□□□□□ -1.55
SNX17-207ENST00000489402 PLEKHB2Q96CS7 222 aa5.38□□□□□ -1.55
SNX17-207ENST00000489402 ZNF22P17026 224 aaPredicted RBP5.37□□□□□ -1.55
SNX17-207ENST00000489402 AKR1D1P51857 326 aa5.37□□□□□ -1.55
SNX17-207ENST00000489402 LINC00310P59036 64 aa5.37□□□□□ -1.55
SNX17-207ENST00000489402 ZNF625Q96I27 306 aaPredicted RBP5.37□□□□□ -1.55
SNX17-207ENST00000489402 HIST1H2BLQ99880 126 aa5.37□□□□□ -1.55
SNX17-207ENST00000489402 ZNF706Q9Y5V0 76 aaPredicted RBP5.37□□□□□ -1.55
SNX17-207ENST00000489402 FP248Q71RG6 208 aaPredicted RBP5.36□□□□□ -1.55
SNX17-207ENST00000489402 LINC00337Q8N6G1 96 aa5.36□□□□□ -1.55
SNX17-207ENST00000489402 SMIM6P0DI80 62 aa5.35□□□□□ -1.55
SNX17-207ENST00000489402 S100A2P29034 98 aa5.35□□□□□ -1.55
SNX17-207ENST00000489402 TMEM170BQ5T4T1 132 aa5.35□□□□□ -1.55
SNX17-207ENST00000489402 C18orf32Q8TCD1 76 aa5.35□□□□□ -1.55
SNX17-207ENST00000489402 SPRR4Q96PI1 79 aa5.35□□□□□ -1.55
SNX17-207ENST00000489402 SERF1AO75920 110 aa5.34□□□□□ -1.55
SNX17-207ENST00000489402 FABP4P15090 132 aa5.34□□□□□ -1.55
SNX17-207ENST00000489402 LINC00158P58513 81 aa5.34□□□□□ -1.55
SNX17-207ENST00000489402 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
SNX17-207ENST00000489402 C11orf86A6NJI1 115 aa5.33□□□□□ -1.56
SNX17-207ENST00000489402 PRYO14603 147 aa5.33□□□□□ -1.56
SNX17-207ENST00000489402 HBDP02042 147 aa5.33□□□□□ -1.56
SNX17-207ENST00000489402 BAGE3Q86Y29 109 aa5.33□□□□□ -1.56
SNX17-207ENST00000489402 C12orf57Q99622 126 aa5.33□□□□□ -1.56
SNX17-207ENST00000489402 A0A096LNJ9 63 aa5.32□□□□□ -1.56
SNX17-207ENST00000489402 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
SNX17-207ENST00000489402 LINC00614P0C842 121 aa5.32□□□□□ -1.56
SNX17-207ENST00000489402 JOSD1Q15040 202 aaPredicted RBP5.32□□□□□ -1.56
SNX17-207ENST00000489402 PYY3Q5JQD4 70 aa5.32□□□□□ -1.56
SNX17-207ENST00000489402 Q8NBF4 154 aa5.32□□□□□ -1.56
SNX17-207ENST00000489402 URB1-AS1Q96HZ7 61 aa5.32□□□□□ -1.56
SNX17-207ENST00000489402 A0A0U1RRA0 63 aa5.31□□□□□ -1.56
SNX17-207ENST00000489402 SPINK1P00995 79 aa5.31□□□□□ -1.56
SNX17-207ENST00000489402 PMCHL1Q16048 86 aa5.31□□□□□ -1.56
SNX17-207ENST00000489402 KRTAP13-3Q3SY46 172 aa5.31□□□□□ -1.56
SNX17-207ENST00000489402 DAND5Q8N907 189 aa5.31□□□□□ -1.56
SNX17-207ENST00000489402 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
SNX17-207ENST00000489402 NDUFA12Q9UI09 145 aa5.31□□□□□ -1.56
SNX17-207ENST00000489402 ETDCA0A1B0GVM5 59 aa5.3□□□□□ -1.56
SNX17-207ENST00000489402 LINC01547P58512 204 aaPredicted RBP5.3□□□□□ -1.56
SNX17-207ENST00000489402 S100A12P80511 92 aa5.3□□□□□ -1.56
SNX17-207ENST00000489402 ASB16-AS1Q495Z4 193 aa5.3□□□□□ -1.56
SNX17-207ENST00000489402 BOD1L2Q8IYS8 172 aa5.3□□□□□ -1.56
SNX17-207ENST00000489402 CHCHD1Q96BP2 118 aaKnown RBP5.3□□□□□ -1.56
SNX17-207ENST00000489402 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
SNX17-207ENST00000489402 NCR3O14931 201 aa5.29□□□□□ -1.56
SNX17-207ENST00000489402 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
SNX17-207ENST00000489402 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
SNX17-207ENST00000489402 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms