RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 KRTAP7-1Q8IUC3 87 aa5.27□□□□□ -1.57
TRAPPC12-221ENST00000489032 FLG2Q5D862 2391 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC12-221ENST00000489032 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
TRAPPC12-221ENST00000489032 E9PLD3 99 aa5.26□□□□□ -1.57
TRAPPC12-221ENST00000489032 Q6ZUT4 128 aa5.26□□□□□ -1.57
TRAPPC12-221ENST00000489032 AMELXQ99217 191 aa5.26□□□□□ -1.57
TRAPPC12-221ENST00000489032 HIGD1BQ9P298 99 aa5.26□□□□□ -1.57
TRAPPC12-221ENST00000489032 DNAH5Q8TE73 4624 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 IGLV4-69A0A075B6H9 119 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 TRAV13-1A0A0B4J241 112 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 LINC00959A0A1B0GUT2 108 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 LECT2O14960 151 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 XCL1P47992 114 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 HINT1P49773 126 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 SEC11AP67812 179 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 HSD52Q0P140 79 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 TMEM170BQ5T4T1 132 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 CD164L2Q6UWJ8 174 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 Q8N814 137 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 CHCHD10Q8WYQ3 142 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 CHAC1Q9BUX1 264 aa5.25□□□□□ -1.57
TRAPPC12-221ENST00000489032 IGKV2D-26A0A0A0MRZ7 120 aa5.24□□□□□ -1.57
TRAPPC12-221ENST00000489032 MYMXA0A1B0GTQ4 84 aa5.24□□□□□ -1.57
TRAPPC12-221ENST00000489032 TAL2Q16559 108 aa5.24□□□□□ -1.57
TRAPPC12-221ENST00000489032 RNASE13Q5GAN3 156 aaKnown RBP5.24□□□□□ -1.57
TRAPPC12-221ENST00000489032 C2orf91Q6ZV80 131 aa5.24□□□□□ -1.57
TRAPPC12-221ENST00000489032 PCP2Q8IVA1 136 aa5.24□□□□□ -1.57
TRAPPC12-221ENST00000489032 TINCRA0A1B0GVN0 87 aa5.23□□□□□ -1.57
TRAPPC12-221ENST00000489032 A6NDN8 102 aa5.23□□□□□ -1.57
TRAPPC12-221ENST00000489032 H3BRM9 83 aa5.23□□□□□ -1.57
TRAPPC12-221ENST00000489032 BVES-AS1Q5T3Y7 98 aa5.23□□□□□ -1.57
TRAPPC12-221ENST00000489032 PLEKHB2Q96CS7 222 aa5.23□□□□□ -1.57
TRAPPC12-221ENST00000489032 GEMIN7Q9H840 131 aaKnown RBP5.23□□□□□ -1.57
TRAPPC12-221ENST00000489032 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 A0A0J9YXV3 536 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 ZNF815PA8K554 130 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 COX7A2LO14548 114 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 LEPROTO15243 131 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 APOMO95445 188 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 ZNF22P17026 224 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 LGALS3P17931 250 aaKnown RBP5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 HERVK_113P63121 156 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 WFDC2Q14508 124 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 KRTAP26-1Q6PEX3 210 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 ORAOV1Q8WV07 137 aa5.22□□□□□ -1.57
TRAPPC12-221ENST00000489032 IGHV1-58A0A0C4DH39 117 aa5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 A0A1B0GV90 55 aa5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 J3QQQ9 107 aa5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 UBE2D1P51668 147 aa5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 NDUFV3P56181 108 aaKnown RBP5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 SCGB1D4Q6XE38 83 aa5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 FAM19A3Q7Z5A8 133 aa5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 FAM104AQ969W3 186 aa5.21□□□□□ -1.58
TRAPPC12-221ENST00000489032 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC12-221ENST00000489032 LINC00469Q8N7U9 141 aa5.2□□□□□ -1.58
TRAPPC12-221ENST00000489032 HIST1H4GQ99525 98 aa5.2□□□□□ -1.58
TRAPPC12-221ENST00000489032 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
TRAPPC12-221ENST00000489032 KRTAP16-1A8MUX0 517 aa5.19□□□□□ -1.58
TRAPPC12-221ENST00000489032 FUSP35637 526 aaKnown RBP eCLIP5.19□□□□□ -1.58
TRAPPC12-221ENST00000489032 C5orf38Q86SI9 138 aa5.19□□□□□ -1.58
TRAPPC12-221ENST00000489032 CEND1Q8N111 149 aa5.19□□□□□ -1.58
TRAPPC12-221ENST00000489032 TTTY13Q9BZ97 58 aa5.19□□□□□ -1.58
TRAPPC12-221ENST00000489032 VPS13BQ7Z7G8 4022 aa5.19□□□□□ -1.58
TRAPPC12-221ENST00000489032 GVQW2A0A096LPI5 108 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC12-221ENST00000489032 SMIM13P0DJ93 91 aa5.18□□□□□ -1.58
TRAPPC12-221ENST00000489032 HIGD2BQ4VC39 106 aa5.18□□□□□ -1.58
TRAPPC12-221ENST00000489032 LINC00242Q5T6M2 205 aa5.18□□□□□ -1.58
TRAPPC12-221ENST00000489032 C15orf56Q8N910 161 aa5.18□□□□□ -1.58
TRAPPC12-221ENST00000489032 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
TRAPPC12-221ENST00000489032 IGHV3OR16-9A0A0B4J2B5 98 aa5.17□□□□□ -1.58
TRAPPC12-221ENST00000489032 CNBPP62633 177 aaKnown RBP5.17□□□□□ -1.58
TRAPPC12-221ENST00000489032 LINC01561Q8N1V8 128 aa5.17□□□□□ -1.58
TRAPPC12-221ENST00000489032 SPANXB1Q9NS25 103 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC12-221ENST00000489032 CDKN2A-AS1Q9UH64 79 aa5.17□□□□□ -1.58
TRAPPC12-221ENST00000489032 PKIGQ9Y2B9 76 aa5.17□□□□□ -1.58
TRAPPC12-221ENST00000489032 FAT1Q14517 4588 aa5.17□□□□□ -1.58
TRAPPC12-221ENST00000489032 IGHV3-64A0A075B6Q5 118 aa5.16□□□□□ -1.58
TRAPPC12-221ENST00000489032 TMEM238C9JI98 176 aa5.16□□□□□ -1.58
TRAPPC12-221ENST00000489032 SMR3BP02814 79 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC12-221ENST00000489032 SPINK8P0C7L1 97 aa5.16□□□□□ -1.58
TRAPPC12-221ENST00000489032 SPAG11BQ08648 103 aa5.16□□□□□ -1.58
TRAPPC12-221ENST00000489032 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
TRAPPC12-221ENST00000489032 RNF213Q63HN8 5207 aa5.15□□□□□ -1.58
TRAPPC12-221ENST00000489032 F8WDY8 70 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 TAX1BP3O14907 124 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 TSPEAR-AS2P59090 65 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 KRTAP10-1P60331 282 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 COX6A2Q02221 97 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 SYCNQ0VAF6 134 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 CIRBPQ14011 172 aaKnown RBP5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 Q6ZVH6 145 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 Q8N377 158 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 CARD19Q96LW7 228 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 CAMK2N2Q96S95 79 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 NDUFA12Q9UI09 145 aa5.15□□□□□ -1.59
TRAPPC12-221ENST00000489032 TIMM17BO60830 172 aa5.14□□□□□ -1.59
TRAPPC12-221ENST00000489032 FXYD2P54710 66 aa5.14□□□□□ -1.59
TRAPPC12-221ENST00000489032 VAMP3Q15836 100 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms