RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	SND1-IT1	Q9HBX3	110 aa		12.02	□□□□□ -0.49
PNCK-231	ENST00000488994	SOSTDC1	Q6X4U4	206 aa		12	□□□□□ -0.49
PNCK-231	ENST00000488994	NHP2	Q9NX24	153 aa	Known RBP	12	□□□□□ -0.49
PNCK-231	ENST00000488994		A0A1B0GWB2	263 aa		11.99	□□□□□ -0.49
PNCK-231	ENST00000488994	LOC107984640	A0A0U1RRK4	108 aa		11.98	□□□□□ -0.49
PNCK-231	ENST00000488994	HERC2	O95714	4834 aa		11.98	□□□□□ -0.49
PNCK-231	ENST00000488994	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.97	□□□□□ -0.49
PNCK-231	ENST00000488994		A0A0B4J2C4	111 aa		11.97	□□□□□ -0.49
PNCK-231	ENST00000488994	NDUFC2	O95298	119 aa		11.97	□□□□□ -0.49
PNCK-231	ENST00000488994	EIF4EBP3	O60516	100 aa	Predicted RBP	11.96	□□□□□ -0.49
PNCK-231	ENST00000488994	CFC1B	P0CG36	223 aa		11.96	□□□□□ -0.49
PNCK-231	ENST00000488994	CFC1	P0CG37	223 aa		11.96	□□□□□ -0.49
PNCK-231	ENST00000488994	RAB37	Q96AX2	223 aa		11.96	□□□□□ -0.49
PNCK-231	ENST00000488994	KIAA1109	Q2LD37	5005 aa		11.96	□□□□□ -0.5
PNCK-231	ENST00000488994		Q6ZRP5	223 aa		11.95	□□□□□ -0.5
PNCK-231	ENST00000488994	C9orf163	Q8N9P6	203 aa		11.95	□□□□□ -0.5
PNCK-231	ENST00000488994	PKD1	P98161	4303 aa		11.95	□□□□□ -0.5
PNCK-231	ENST00000488994	RPL18A	Q02543	176 aa	Known RBP	11.94	□□□□□ -0.5
PNCK-231	ENST00000488994	PRO1854	Q9UHT4	67 aa		11.94	□□□□□ -0.5
PNCK-231	ENST00000488994	GAGE2E	Q4V326	116 aa		11.94	□□□□□ -0.5
PNCK-231	ENST00000488994	GAGE2D	Q9UEU5	116 aa		11.94	□□□□□ -0.5
PNCK-231	ENST00000488994	DNAH11	Q96DT5	4516 aa		11.93	□□□□□ -0.5
PNCK-231	ENST00000488994	TRAV13-2	A0A0B4J235	113 aa		11.92	□□□□□ -0.5
PNCK-231	ENST00000488994	XAGE1A	Q9HD64	81 aa		11.92	□□□□□ -0.5
PNCK-231	ENST00000488994	C16orf90	A8MZG2	172 aa		11.9	□□□□□ -0.5
PNCK-231	ENST00000488994		K7ERJ3	54 aa		11.9	□□□□□ -0.5
PNCK-231	ENST00000488994	TNP2	Q05952	138 aa		11.9	□□□□□ -0.5
PNCK-231	ENST00000488994	GAGE2B	Q13066	116 aa		11.89	□□□□□ -0.51
PNCK-231	ENST00000488994	PLA2G2D	Q9UNK4	145 aa		11.89	□□□□□ -0.51
PNCK-231	ENST00000488994	TRBV10-2	A0A0K0K1G8	114 aa		11.88	□□□□□ -0.51
PNCK-231	ENST00000488994	LINC00474	Q9P2X8	69 aa		11.88	□□□□□ -0.51
PNCK-231	ENST00000488994	TAX1BP3	O14907	124 aa		11.87	□□□□□ -0.51
PNCK-231	ENST00000488994	DYNC1H1	Q14204	4646 aa	Known RBP	11.87	□□□□□ -0.51
PNCK-231	ENST00000488994	IGKV2-28	A0A075B6P5	120 aa		11.86	□□□□□ -0.51
PNCK-231	ENST00000488994	IGKV2D-28	P01615	120 aa		11.86	□□□□□ -0.51
PNCK-231	ENST00000488994	C9orf129	Q5T035	196 aa	Known RBP	11.86	□□□□□ -0.51
PNCK-231	ENST00000488994	IGLV5-52	A0A0A0MRZ9	124 aa		11.86	□□□□□ -0.51
PNCK-231	ENST00000488994	SDIM1	Q6ZPB5	146 aa		11.86	□□□□□ -0.51
PNCK-231	ENST00000488994	C9orf118	A6NHY6	69 aa		11.85	□□□□□ -0.51
PNCK-231	ENST00000488994	PGPEP1	Q9NXJ5	209 aa		11.85	□□□□□ -0.51
PNCK-231	ENST00000488994	VPREB1	P12018	145 aa		11.84	□□□□□ -0.51
PNCK-231	ENST00000488994	RPL13A	P40429	203 aa	Known RBP	11.84	□□□□□ -0.51
PNCK-231	ENST00000488994	TMEM126A	Q9H061	195 aa		11.84	□□□□□ -0.51
PNCK-231	ENST00000488994		A0A096LNI7	61 aa		11.83	□□□□□ -0.52
PNCK-231	ENST00000488994	LINC00337	Q8N6G1	96 aa		11.83	□□□□□ -0.52
PNCK-231	ENST00000488994	OR13C6P	Q8NH95	151 aa		11.83	□□□□□ -0.52
PNCK-231	ENST00000488994	KRTAP17-1	Q9BYP8	105 aa		11.83	□□□□□ -0.52
PNCK-231	ENST00000488994	CBY1	Q9Y3M2	126 aa		11.83	□□□□□ -0.52
PNCK-231	ENST00000488994		M0R378	163 aa		11.82	□□□□□ -0.52
PNCK-231	ENST00000488994	PRR3	P79522	188 aa	Known RBP	11.82	□□□□□ -0.52
PNCK-231	ENST00000488994		Q1RN00	199 aa		11.82	□□□□□ -0.52
PNCK-231	ENST00000488994	S100A7L2	Q5SY68	101 aa		11.82	□□□□□ -0.52
PNCK-231	ENST00000488994	NKAPP1	Q8N9T2	125 aa		11.82	□□□□□ -0.52
PNCK-231	ENST00000488994	IGLV5-37	A0A075B6J1	123 aa		11.81	□□□□□ -0.52
PNCK-231	ENST00000488994	TSPAN13	O95857	204 aa		11.81	□□□□□ -0.52
PNCK-231	ENST00000488994	IGKV2-24	A0A0C4DH68	120 aa		11.8	□□□□□ -0.52
PNCK-231	ENST00000488994		H7C2G1	150 aa		11.8	□□□□□ -0.52
PNCK-231	ENST00000488994	NCR3	O14931	201 aa		11.8	□□□□□ -0.52
PNCK-231	ENST00000488994		Q8NDZ9	215 aa		11.8	□□□□□ -0.52
PNCK-231	ENST00000488994		H3BUT2	72 aa		11.79	□□□□□ -0.52
PNCK-231	ENST00000488994	LYRM7	Q5U5X0	104 aa		11.79	□□□□□ -0.52
PNCK-231	ENST00000488994	PCLO	Q9Y6V0	5065 aa		11.79	□□□□□ -0.52
PNCK-231	ENST00000488994	PSMB2	P49721	201 aa		11.78	□□□□□ -0.52
PNCK-231	ENST00000488994	IGLV6-57	P01721	117 aa		11.77	□□□□□ -0.52
PNCK-231	ENST00000488994	COX6C	P09669	75 aa		11.77	□□□□□ -0.52
PNCK-231	ENST00000488994	LINC01620	Q4KN68	170 aa		11.77	□□□□□ -0.53
PNCK-231	ENST00000488994	SERTAD4-AS1	Q5TG53	156 aa		11.77	□□□□□ -0.53
PNCK-231	ENST00000488994		A0A1W2PPM0	123 aa		11.76	□□□□□ -0.53
PNCK-231	ENST00000488994	FABP2	P12104	132 aa		11.76	□□□□□ -0.53
PNCK-231	ENST00000488994	RPL28	P46779	137 aa	Known RBP	11.76	□□□□□ -0.53
PNCK-231	ENST00000488994	KRTAP10-2	P60368	255 aa		11.75	□□□□□ -0.53
PNCK-231	ENST00000488994	DPH3	Q96FX2	82 aa		11.75	□□□□□ -0.53
PNCK-231	ENST00000488994	C22orf24	Q9Y442	160 aa		11.75	□□□□□ -0.53
PNCK-231	ENST00000488994	LRP1B	Q9NZR2	4599 aa		11.74	□□□□□ -0.53
PNCK-231	ENST00000488994	FAM168B	A1KXE4	195 aa		11.74	□□□□□ -0.53
PNCK-231	ENST00000488994	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.74	□□□□□ -0.53
PNCK-231	ENST00000488994	RYR1	P21817	5038 aa		11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	CDK2AP2	O75956	126 aa		11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	CHTF8	P0CG12	524 aa		11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	SCGB1C2	P0DMR2	95 aa		11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	MRPL55	Q7Z7F7	128 aa	Known RBP	11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	SMIM11B	Q8TCY0	68 aa		11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	SPACA4	Q8TDM5	124 aa		11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	HSPG2	P98160	4391 aa		11.73	□□□□□ -0.53
PNCK-231	ENST00000488994	DNAH5	Q8TE73	4624 aa		11.72	□□□□□ -0.53
PNCK-231	ENST00000488994	TRBV10-3	A0A0K0K1G6	114 aa		11.72	□□□□□ -0.53
PNCK-231	ENST00000488994	NAA38	Q9BRA0	125 aa	Known RBP	11.72	□□□□□ -0.53
PNCK-231	ENST00000488994		A0A1W2PNN7	141 aa		11.71	□□□□□ -0.53
PNCK-231	ENST00000488994	C7orf33	Q8WU49	177 aa		11.71	□□□□□ -0.53
PNCK-231	ENST00000488994		M0QXV9	152 aa		11.7	□□□□□ -0.54
PNCK-231	ENST00000488994	TRIAP1	O43715	76 aa		11.7	□□□□□ -0.54
PNCK-231	ENST00000488994	FUS	P35637	526 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
PNCK-231	ENST00000488994	VAMP3	Q15836	100 aa		11.7	□□□□□ -0.54
PNCK-231	ENST00000488994	KRTAP7-1	Q8IUC3	87 aa		11.7	□□□□□ -0.54
PNCK-231	ENST00000488994	TRBV20-1	A0A075B6N2	111 aa		11.69	□□□□□ -0.54
PNCK-231	ENST00000488994	TRAV23DV6	A0A075B6W5	121 aa		11.69	□□□□□ -0.54
PNCK-231	ENST00000488994		A0A1B0GV90	55 aa		11.69	□□□□□ -0.54
PNCK-231	ENST00000488994	EPM2A	B3EWF7	344 aa		11.69	□□□□□ -0.54
PNCK-231	ENST00000488994		H0YGX0	51 aa		11.69	□□□□□ -0.54
PNCK-231	ENST00000488994	LINC00167	Q96N53	147 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms