RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 M0R378 163 aa10.67□□□□□ -0.7
ATG9A-222ENST00000488833 RETNLBQ9BQ08 111 aa10.66□□□□□ -0.7
ATG9A-222ENST00000488833 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
ATG9A-222ENST00000488833 APOC3P02656 99 aa10.64□□□□□ -0.71
ATG9A-222ENST00000488833 LINC00158P58513 81 aa10.64□□□□□ -0.71
ATG9A-222ENST00000488833 A0A0U1RRA0 63 aa10.63□□□□□ -0.71
ATG9A-222ENST00000488833 CBLN2Q8IUK8 224 aa10.63□□□□□ -0.71
ATG9A-222ENST00000488833 HIGD2AQ9BW72 106 aa10.62□□□□□ -0.71
ATG9A-222ENST00000488833 A0A0U1RQV1 116 aa10.61□□□□□ -0.71
ATG9A-222ENST00000488833 SNAPINO95295 136 aa10.61□□□□□ -0.71
ATG9A-222ENST00000488833 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
ATG9A-222ENST00000488833 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
ATG9A-222ENST00000488833 NDUFA5Q16718 116 aa10.6□□□□□ -0.71
ATG9A-222ENST00000488833 SVBPQ8N300 66 aa10.6□□□□□ -0.71
ATG9A-222ENST00000488833 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
ATG9A-222ENST00000488833 MUC17Q685J3 4493 aa10.59□□□□□ -0.71
ATG9A-222ENST00000488833 TRAV12-1A0A0B4J245 112 aa10.59□□□□□ -0.71
ATG9A-222ENST00000488833 IFI27L1Q96BM0 104 aa10.59□□□□□ -0.71
ATG9A-222ENST00000488833 CHCHD1Q96BP2 118 aaKnown RBP10.58□□□□□ -0.72
ATG9A-222ENST00000488833 ATP6V1G1O75348 118 aa10.57□□□□□ -0.72
ATG9A-222ENST00000488833 SMIM13P0DJ93 91 aa10.57□□□□□ -0.72
ATG9A-222ENST00000488833 MEIG1Q5JSS6 88 aa10.57□□□□□ -0.72
ATG9A-222ENST00000488833 BOD1L2Q8IYS8 172 aa10.55□□□□□ -0.72
ATG9A-222ENST00000488833 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
ATG9A-222ENST00000488833 IGLV7-46A0A075B6I9 117 aa10.54□□□□□ -0.72
ATG9A-222ENST00000488833 PRYO14603 147 aa10.54□□□□□ -0.72
ATG9A-222ENST00000488833 NCR3O14931 201 aa10.54□□□□□ -0.72
ATG9A-222ENST00000488833 CTAG1AP78358 180 aa10.54□□□□□ -0.72
ATG9A-222ENST00000488833 YPEL4Q96NS1 127 aa10.54□□□□□ -0.72
ATG9A-222ENST00000488833 CDIP1Q9H305 208 aa10.54□□□□□ -0.72
ATG9A-222ENST00000488833 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
ATG9A-222ENST00000488833 MIR7-3HGQ8N6C7 128 aa10.53□□□□□ -0.72
ATG9A-222ENST00000488833 ZNF706Q9Y5V0 76 aaPredicted RBP10.53□□□□□ -0.72
ATG9A-222ENST00000488833 HERV-K104P63124 156 aa10.52□□□□□ -0.73
ATG9A-222ENST00000488833 HSBP1O75506 76 aa10.51□□□□□ -0.73
ATG9A-222ENST00000488833 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
ATG9A-222ENST00000488833 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
ATG9A-222ENST00000488833 H0Y8G0 127 aa10.5□□□□□ -0.73
ATG9A-222ENST00000488833 ETDCA0A1B0GVM5 59 aa10.49□□□□□ -0.73
ATG9A-222ENST00000488833 SPAG11AQ6PDA7 123 aa10.49□□□□□ -0.73
ATG9A-222ENST00000488833 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
ATG9A-222ENST00000488833 FAT4Q6V0I7 4981 aa10.49□□□□□ -0.73
ATG9A-222ENST00000488833 TRBV10-3A0A0K0K1G6 114 aa10.48□□□□□ -0.73
ATG9A-222ENST00000488833 MYMXA0A1B0GTQ4 84 aa10.48□□□□□ -0.73
ATG9A-222ENST00000488833 LINC00587B1AMM8 73 aa10.48□□□□□ -0.73
ATG9A-222ENST00000488833 SPRR1AP35321 89 aa10.48□□□□□ -0.73
ATG9A-222ENST00000488833 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
ATG9A-222ENST00000488833 KCNQ1DNQ9H478 68 aa10.48□□□□□ -0.73
ATG9A-222ENST00000488833 C4orf48Q5BLP8 95 aa10.47□□□□□ -0.73
ATG9A-222ENST00000488833 SMCR5Q8TEV8 140 aa10.47□□□□□ -0.73
ATG9A-222ENST00000488833 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
ATG9A-222ENST00000488833 KRTAP4-16G5E9R7 235 aaPredicted RBP10.45□□□□□ -0.74
ATG9A-222ENST00000488833 TSPEAR-AS2P59090 65 aa10.45□□□□□ -0.74
ATG9A-222ENST00000488833 DAND5Q8N907 189 aa10.45□□□□□ -0.74
ATG9A-222ENST00000488833 Q8NBF4 154 aa10.45□□□□□ -0.74
ATG9A-222ENST00000488833 S100A12P80511 92 aa10.44□□□□□ -0.74
ATG9A-222ENST00000488833 LEPROTL1O95214 131 aa10.43□□□□□ -0.74
ATG9A-222ENST00000488833 LEPROTO15243 131 aa10.42□□□□□ -0.74
ATG9A-222ENST00000488833 FP248Q71RG6 208 aaPredicted RBP10.42□□□□□ -0.74
ATG9A-222ENST00000488833 SERF1AO75920 110 aa10.41□□□□□ -0.74
ATG9A-222ENST00000488833 TRGC2P03986 189 aa10.41□□□□□ -0.74
ATG9A-222ENST00000488833 PLNP26678 52 aa10.41□□□□□ -0.74
ATG9A-222ENST00000488833 DDTP30046 118 aa10.4□□□□□ -0.74
ATG9A-222ENST00000488833 LINC00310P59036 64 aa10.4□□□□□ -0.74
ATG9A-222ENST00000488833 LINC00483Q53H64 154 aa10.4□□□□□ -0.74
ATG9A-222ENST00000488833 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.74
ATG9A-222ENST00000488833 B5MCH6 92 aa10.39□□□□□ -0.75
ATG9A-222ENST00000488833 J3QQQ9 107 aa10.39□□□□□ -0.75
ATG9A-222ENST00000488833 HERVK_113P61574 105 aa10.39□□□□□ -0.75
ATG9A-222ENST00000488833 LOC107984156A0A0G2JMH3 177 aa10.38□□□□□ -0.75
ATG9A-222ENST00000488833 TRBV10-2A0A0K0K1G8 114 aa10.38□□□□□ -0.75
ATG9A-222ENST00000488833 DPM2O94777 84 aa10.38□□□□□ -0.75
ATG9A-222ENST00000488833 LCE2AQ5TA79 106 aaPredicted RBP10.38□□□□□ -0.75
ATG9A-222ENST00000488833 ARL17AQ8IVW1 177 aa10.38□□□□□ -0.75
ATG9A-222ENST00000488833 MIEN1Q9BRT3 115 aa10.38□□□□□ -0.75
ATG9A-222ENST00000488833 ERC2-IT1O76042 136 aa10.37□□□□□ -0.75
ATG9A-222ENST00000488833 FABP4P15090 132 aa10.37□□□□□ -0.75
ATG9A-222ENST00000488833 NMUP48645 174 aa10.37□□□□□ -0.75
ATG9A-222ENST00000488833 PMCHL2Q9BQD1 86 aa10.37□□□□□ -0.75
ATG9A-222ENST00000488833 SPANXB1Q9NS25 103 aaPredicted RBP10.37□□□□□ -0.75
ATG9A-222ENST00000488833 HSPB8Q9UJY1 196 aa10.37□□□□□ -0.75
ATG9A-222ENST00000488833 IGLV9-49A0A0B4J1Y8 123 aa10.36□□□□□ -0.75
ATG9A-222ENST00000488833 SPINK1P00995 79 aa10.36□□□□□ -0.75
ATG9A-222ENST00000488833 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
ATG9A-222ENST00000488833 MOBPQ13875 183 aa10.36□□□□□ -0.75
ATG9A-222ENST00000488833 Q9BRP9 147 aa10.35□□□□□ -0.75
ATG9A-222ENST00000488833 IGKCP01834 107 aa10.34□□□□□ -0.75
ATG9A-222ENST00000488833 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
ATG9A-222ENST00000488833 S100A7L2Q5SY68 101 aa10.34□□□□□ -0.75
ATG9A-222ENST00000488833 Q6ZRX8 168 aa10.34□□□□□ -0.75
ATG9A-222ENST00000488833 NDUFC2O95298 119 aa10.32□□□□□ -0.76
ATG9A-222ENST00000488833 IGLV6-57P01721 117 aa10.32□□□□□ -0.76
ATG9A-222ENST00000488833 KRTAP9-2Q9BYQ4 174 aa10.32□□□□□ -0.76
ATG9A-222ENST00000488833 NPC2P61916 151 aa10.31□□□□□ -0.76
ATG9A-222ENST00000488833 TRAV23DV6A0A075B6W5 121 aa10.3□□□□□ -0.76
ATG9A-222ENST00000488833 SSBP3-AS1Q7Z2R9 100 aa10.3□□□□□ -0.76
ATG9A-222ENST00000488833 SOSTDC1Q6X4U4 206 aa10.29□□□□□ -0.76
ATG9A-222ENST00000488833 RPS29P62273 56 aaKnown RBP10.28□□□□□ -0.76
ATG9A-222ENST00000488833 JOSD1Q15040 202 aaPredicted RBP10.28□□□□□ -0.76
ATG9A-222ENST00000488833 A0A0J9YXY3 114 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms