RNA–Protein interactions for RNA: ENST00000488556.1

TMPRSS2-209, Transcript of transmembrane serine protease 2, humanhuman

TSL 2

Gene TMPRSS2, Length 633 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS2-209ENST00000488556 GCSHP23434 173 aa9.52□□□□□ -0.89
TMPRSS2-209ENST00000488556 FXYD2P54710 66 aa9.52□□□□□ -0.89
TMPRSS2-209ENST00000488556 LINC01620Q4KN68 170 aa9.52□□□□□ -0.89
TMPRSS2-209ENST00000488556 BVES-AS1Q5T3Y7 98 aa9.52□□□□□ -0.89
TMPRSS2-209ENST00000488556 KRTAP7-1Q8IUC3 87 aa9.52□□□□□ -0.89
TMPRSS2-209ENST00000488556 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
TMPRSS2-209ENST00000488556 DNAH5Q8TE73 4624 aa9.51□□□□□ -0.89
TMPRSS2-209ENST00000488556 NDUFC2O95298 119 aa9.51□□□□□ -0.89
TMPRSS2-209ENST00000488556 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
TMPRSS2-209ENST00000488556 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
TMPRSS2-209ENST00000488556 A0A1B0GWB2 263 aa9.5□□□□□ -0.89
TMPRSS2-209ENST00000488556 A4D1N5 150 aa9.5□□□□□ -0.89
TMPRSS2-209ENST00000488556 RPL18AQ02543 176 aaKnown RBP9.5□□□□□ -0.89
TMPRSS2-209ENST00000488556 GAGE2EQ4V326 116 aa9.5□□□□□ -0.89
TMPRSS2-209ENST00000488556 GAGE2DQ9UEU5 116 aa9.5□□□□□ -0.89
TMPRSS2-209ENST00000488556 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 IGKV2-28A0A075B6P5 120 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 PCP4L1A6NKN8 68 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 PANO1I0J062 215 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 IGKV2D-28P01615 120 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 VPREB1P12018 145 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 NPC2P61916 151 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 GAGE2BQ13066 116 aa9.49□□□□□ -0.89
TMPRSS2-209ENST00000488556 M0R143 59 aa9.48□□□□□ -0.89
TMPRSS2-209ENST00000488556 HINT1P49773 126 aaPredicted RBP9.47□□□□□ -0.89
TMPRSS2-209ENST00000488556 Q6ZSA8 131 aa9.47□□□□□ -0.89
TMPRSS2-209ENST00000488556 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
TMPRSS2-209ENST00000488556 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
TMPRSS2-209ENST00000488556 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.47□□□□□ -0.89
TMPRSS2-209ENST00000488556 CHTF8P0CG12 524 aa9.46□□□□□ -0.9
TMPRSS2-209ENST00000488556 CFC1BP0CG36 223 aa9.46□□□□□ -0.9
TMPRSS2-209ENST00000488556 CFC1P0CG37 223 aa9.46□□□□□ -0.9
TMPRSS2-209ENST00000488556 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
TMPRSS2-209ENST00000488556 SERTAD4-AS1Q5TG53 156 aa9.46□□□□□ -0.9
TMPRSS2-209ENST00000488556 SNHG12Q9BXW3 62 aa9.46□□□□□ -0.9
TMPRSS2-209ENST00000488556 DNAH8Q96JB1 4490 aa9.45□□□□□ -0.9
TMPRSS2-209ENST00000488556 TRBV10-2A0A0K0K1G8 114 aa9.45□□□□□ -0.9
TMPRSS2-209ENST00000488556 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
TMPRSS2-209ENST00000488556 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
TMPRSS2-209ENST00000488556 FAM168BA1KXE4 195 aa9.44□□□□□ -0.9
TMPRSS2-209ENST00000488556 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
TMPRSS2-209ENST00000488556 IGKV2-24A0A0C4DH68 120 aa9.43□□□□□ -0.9
TMPRSS2-209ENST00000488556 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
TMPRSS2-209ENST00000488556 A6NJY4 79 aa9.43□□□□□ -0.9
TMPRSS2-209ENST00000488556 LINC00337Q8N6G1 96 aa9.43□□□□□ -0.9
TMPRSS2-209ENST00000488556 FAM30AQ9NZY2 134 aa9.42□□□□□ -0.9
TMPRSS2-209ENST00000488556 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
TMPRSS2-209ENST00000488556 IGLV6-57P01721 117 aa9.4□□□□□ -0.9
TMPRSS2-209ENST00000488556 NHP2Q9NX24 153 aaKnown RBP9.4□□□□□ -0.9
TMPRSS2-209ENST00000488556 C22orf24Q9Y442 160 aa9.4□□□□□ -0.9
TMPRSS2-209ENST00000488556 PKHD1P08F94 4074 aa9.39□□□□□ -0.91
TMPRSS2-209ENST00000488556 A0A087WYN8 130 aa9.39□□□□□ -0.91
TMPRSS2-209ENST00000488556 M0R378 163 aa9.39□□□□□ -0.91
TMPRSS2-209ENST00000488556 A6NDN8 102 aa9.38□□□□□ -0.91
TMPRSS2-209ENST00000488556 K7ERJ3 54 aa9.38□□□□□ -0.91
TMPRSS2-209ENST00000488556 C7orf33Q8WU49 177 aa9.38□□□□□ -0.91
TMPRSS2-209ENST00000488556 TRAV13-2A0A0B4J235 113 aa9.37□□□□□ -0.91
TMPRSS2-209ENST00000488556 NCR3O14931 201 aa9.37□□□□□ -0.91
TMPRSS2-209ENST00000488556 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
TMPRSS2-209ENST00000488556 PRO1854Q9UHT4 67 aa9.37□□□□□ -0.91
TMPRSS2-209ENST00000488556 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
TMPRSS2-209ENST00000488556 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
TMPRSS2-209ENST00000488556 IGLV1-50A0A075B6I6 118 aa9.35□□□□□ -0.91
TMPRSS2-209ENST00000488556 BATFQ16520 125 aa9.35□□□□□ -0.91
TMPRSS2-209ENST00000488556 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
TMPRSS2-209ENST00000488556 LINC00167Q96N53 147 aa9.35□□□□□ -0.91
TMPRSS2-209ENST00000488556 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
TMPRSS2-209ENST00000488556 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
TMPRSS2-209ENST00000488556 M0QXV9 152 aa9.34□□□□□ -0.91
TMPRSS2-209ENST00000488556 TAX1BP3O14907 124 aa9.34□□□□□ -0.91
TMPRSS2-209ENST00000488556 NKAPP1Q8N9T2 125 aa9.34□□□□□ -0.91
TMPRSS2-209ENST00000488556 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
TMPRSS2-209ENST00000488556 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
TMPRSS2-209ENST00000488556 KCNQ1DNQ9H478 68 aa9.34□□□□□ -0.91
TMPRSS2-209ENST00000488556 RPL13AP40429 203 aaKnown RBP9.33□□□□□ -0.92
TMPRSS2-209ENST00000488556 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
TMPRSS2-209ENST00000488556 LBHQ53QV2 105 aaPredicted RBP9.32□□□□□ -0.92
TMPRSS2-209ENST00000488556 COL5A1-AS1Q5SY13 56 aa9.32□□□□□ -0.92
TMPRSS2-209ENST00000488556 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
TMPRSS2-209ENST00000488556 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
TMPRSS2-209ENST00000488556 TSPAN13O95857 204 aa9.31□□□□□ -0.92
TMPRSS2-209ENST00000488556 SPRR1AP35321 89 aa9.31□□□□□ -0.92
TMPRSS2-209ENST00000488556 RPL28P46779 137 aaKnown RBP9.31□□□□□ -0.92
TMPRSS2-209ENST00000488556 KRTAP4-16G5E9R7 235 aaPredicted RBP9.3□□□□□ -0.92
TMPRSS2-209ENST00000488556 SMIM11BQ8TCY0 68 aa9.3□□□□□ -0.92
TMPRSS2-209ENST00000488556 GAGE10A6NGK3 116 aa9.29□□□□□ -0.92
TMPRSS2-209ENST00000488556 XGP55808 180 aa9.29□□□□□ -0.92
TMPRSS2-209ENST00000488556 S100A7L2Q5SY68 101 aa9.29□□□□□ -0.92
TMPRSS2-209ENST00000488556 OR13C6PQ8NH95 151 aa9.29□□□□□ -0.92
TMPRSS2-209ENST00000488556 DPH3Q96FX2 82 aa9.28□□□□□ -0.92
TMPRSS2-209ENST00000488556 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
TMPRSS2-209ENST00000488556 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
TMPRSS2-209ENST00000488556 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
TMPRSS2-209ENST00000488556 PRYO14603 147 aa9.27□□□□□ -0.93
TMPRSS2-209ENST00000488556 CBY1Q9Y3M2 126 aa9.26□□□□□ -0.93
TMPRSS2-209ENST00000488556 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
TMPRSS2-209ENST00000488556 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
TMPRSS2-209ENST00000488556 H7C2G1 150 aa9.24□□□□□ -0.93
TMPRSS2-209ENST00000488556 TRIAP1O43715 76 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms