RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 LINC00158P58513 81 aa14.11□□□□□ -0.15
STRADB-209ENST00000488196 PMCHL2Q9BQD1 86 aa14.11□□□□□ -0.15
STRADB-209ENST00000488196 ZNF861PO60384 105 aa14.09□□□□□ -0.15
STRADB-209ENST00000488196 VPREB1P12018 145 aa14.09□□□□□ -0.15
STRADB-209ENST00000488196 Q8NDZ9 215 aa14.09□□□□□ -0.15
STRADB-209ENST00000488196 BCE1O60756 84 aa14.07□□□□□ -0.16
STRADB-209ENST00000488196 PLNP26678 52 aa14.07□□□□□ -0.16
STRADB-209ENST00000488196 NDUFA12Q9UI09 145 aa14.07□□□□□ -0.16
STRADB-209ENST00000488196 HMCN2Q8NDA2 5059 aa14.06□□□□□ -0.16
STRADB-209ENST00000488196 DPM2O94777 84 aa14.06□□□□□ -0.16
STRADB-209ENST00000488196 SMIM13P0DJ93 91 aa14.06□□□□□ -0.16
STRADB-209ENST00000488196 TSPEAR-AS2P59090 65 aa14.06□□□□□ -0.16
STRADB-209ENST00000488196 PRR26Q8N8Z3 221 aa14.06□□□□□ -0.16
STRADB-209ENST00000488196 IGKV2-28A0A075B6P5 120 aa14.05□□□□□ -0.16
STRADB-209ENST00000488196 IGKV2D-28P01615 120 aa14.05□□□□□ -0.16
STRADB-209ENST00000488196 KRTAP1-4P0C5Y4 121 aa14.05□□□□□ -0.16
STRADB-209ENST00000488196 RPL24P83731 157 aaKnown RBP14.05□□□□□ -0.16
STRADB-209ENST00000488196 MEIG1Q5JSS6 88 aa14.05□□□□□ -0.16
STRADB-209ENST00000488196 MAP1LC3CQ9BXW4 147 aa14.05□□□□□ -0.16
STRADB-209ENST00000488196 LEPROTO15243 131 aa14.03□□□□□ -0.16
STRADB-209ENST00000488196 IGKCP01834 107 aa14.03□□□□□ -0.16
STRADB-209ENST00000488196 HERV-K104P63124 156 aa14.03□□□□□ -0.16
STRADB-209ENST00000488196 MYMXA0A1B0GTQ4 84 aa14.02□□□□□ -0.17
STRADB-209ENST00000488196 ATP6V1G1O75348 118 aa14.01□□□□□ -0.17
STRADB-209ENST00000488196 RPL28P46779 137 aaKnown RBP14.01□□□□□ -0.17
STRADB-209ENST00000488196 PLEKHB2Q96CS7 222 aa14.01□□□□□ -0.17
STRADB-209ENST00000488196 IGLV1-50A0A075B6I6 118 aa14□□□□□ -0.17
STRADB-209ENST00000488196 MIR7-3HGQ8N6C7 128 aa14□□□□□ -0.17
STRADB-209ENST00000488196 J3QQQ9 107 aa13.99□□□□□ -0.17
STRADB-209ENST00000488196 HERVK_113P61574 105 aa13.99□□□□□ -0.17
STRADB-209ENST00000488196 SYS1-DBNDD2H3BUS1 97 aa13.98□□□□□ -0.17
STRADB-209ENST00000488196 TMEM238C9JI98 176 aa13.97□□□□□ -0.17
STRADB-209ENST00000488196 UBE2AP49459 152 aa13.97□□□□□ -0.17
STRADB-209ENST00000488196 KRTAP13-1Q8IUC0 172 aa13.96□□□□□ -0.17
STRADB-209ENST00000488196 BOD1L2Q8IYS8 172 aa13.96□□□□□ -0.17
STRADB-209ENST00000488196 LINC00587B1AMM8 73 aa13.95□□□□□ -0.18
STRADB-209ENST00000488196 TMEM126AQ9H061 195 aa13.95□□□□□ -0.18
STRADB-209ENST00000488196 LGALS3P17931 250 aaKnown RBP13.94□□□□□ -0.18
STRADB-209ENST00000488196 DAND5Q8N907 189 aa13.93□□□□□ -0.18
STRADB-209ENST00000488196 M0R378 163 aa13.92□□□□□ -0.18
STRADB-209ENST00000488196 PRLHP81277 87 aa13.92□□□□□ -0.18
STRADB-209ENST00000488196 COA6Q5JTJ3 125 aaKnown RBP13.92□□□□□ -0.18
STRADB-209ENST00000488196 NCR3O14931 201 aa13.91□□□□□ -0.18
STRADB-209ENST00000488196 NMUP48645 174 aa13.91□□□□□ -0.18
STRADB-209ENST00000488196 LINC01545Q5VT33 79 aa13.91□□□□□ -0.18
STRADB-209ENST00000488196 FAM19A1Q7Z5A9 133 aa13.91□□□□□ -0.18
STRADB-209ENST00000488196 E9PLD3 99 aa13.89□□□□□ -0.19
STRADB-209ENST00000488196 PET117Q6UWS5 81 aa13.89□□□□□ -0.19
STRADB-209ENST00000488196 C3orf79P0CE67 100 aa13.88□□□□□ -0.19
STRADB-209ENST00000488196 RPL13AP40429 203 aaKnown RBP13.87□□□□□ -0.19
STRADB-209ENST00000488196 ANAPC11Q9NYG5 84 aa13.87□□□□□ -0.19
STRADB-209ENST00000488196 A0A087X002 238 aa13.85□□□□□ -0.19
STRADB-209ENST00000488196 LOC107984156A0A0G2JMH3 177 aa13.84□□□□□ -0.19
STRADB-209ENST00000488196 A0A0J9YXY3 114 aa13.84□□□□□ -0.19
STRADB-209ENST00000488196 KRTDAPP60985 99 aa13.84□□□□□ -0.19
STRADB-209ENST00000488196 ARL17AQ8IVW1 177 aa13.84□□□□□ -0.19
STRADB-209ENST00000488196 IGKV2D-26A0A0A0MRZ7 120 aa13.83□□□□□ -0.2
STRADB-209ENST00000488196 S100A1P23297 94 aa13.82□□□□□ -0.2
STRADB-209ENST00000488196 TRBV10-3A0A0K0K1G6 114 aa13.81□□□□□ -0.2
STRADB-209ENST00000488196 PRYO14603 147 aa13.81□□□□□ -0.2
STRADB-209ENST00000488196 ADAMTSL4-AS1Q5T5F5 129 aa13.81□□□□□ -0.2
STRADB-209ENST00000488196 CRYGAP11844 174 aa13.8□□□□□ -0.2
STRADB-209ENST00000488196 KCNQ1DNQ9H478 68 aa13.8□□□□□ -0.2
STRADB-209ENST00000488196 EIF4EBP3O60516 100 aaPredicted RBP13.79□□□□□ -0.2
STRADB-209ENST00000488196 NPC2P61916 151 aa13.79□□□□□ -0.2
STRADB-209ENST00000488196 MIEN1Q9BRT3 115 aa13.79□□□□□ -0.2
STRADB-209ENST00000488196 HIGD2AQ9BW72 106 aa13.79□□□□□ -0.2
STRADB-209ENST00000488196 SOSTDC1Q6X4U4 206 aa13.78□□□□□ -0.2
STRADB-209ENST00000488196 TTTY13Q9BZ97 58 aa13.77□□□□□ -0.21
STRADB-209ENST00000488196 SPRR1AP35321 89 aa13.76□□□□□ -0.21
STRADB-209ENST00000488196 KRTAP13-2Q52LG2 175 aa13.76□□□□□ -0.21
STRADB-209ENST00000488196 TYMSOSQ8TAI1 123 aa13.76□□□□□ -0.21
STRADB-209ENST00000488196 LRP2P98164 4655 aa13.75□□□□□ -0.21
STRADB-209ENST00000488196 TRBV10-2A0A0K0K1G8 114 aa13.74□□□□□ -0.21
STRADB-209ENST00000488196 ZNF815PA8K554 130 aa13.74□□□□□ -0.21
STRADB-209ENST00000488196 DDTP30046 118 aa13.74□□□□□ -0.21
STRADB-209ENST00000488196 LINC00337Q8N6G1 96 aa13.74□□□□□ -0.21
STRADB-209ENST00000488196 LITAFQ99732 161 aa13.74□□□□□ -0.21
STRADB-209ENST00000488196 SPANXB1Q9NS25 103 aaPredicted RBP13.74□□□□□ -0.21
STRADB-209ENST00000488196 KRTAP4-16G5E9R7 235 aaPredicted RBP13.73□□□□□ -0.21
STRADB-209ENST00000488196 FAM229BQ4G0N7 80 aa13.73□□□□□ -0.21
STRADB-209ENST00000488196 UBR4Q5T4S7 5183 aa13.73□□□□□ -0.21
STRADB-209ENST00000488196 ETDCA0A1B0GVM5 59 aa13.72□□□□□ -0.21
STRADB-209ENST00000488196 C20orf202A1L168 122 aa13.72□□□□□ -0.21
STRADB-209ENST00000488196 NDUFC2O95298 119 aa13.72□□□□□ -0.21
STRADB-209ENST00000488196 ATOH7Q8N100 152 aa13.72□□□□□ -0.21
STRADB-209ENST00000488196 TIMM17BO60830 172 aa13.69□□□□□ -0.22
STRADB-209ENST00000488196 TSPAN13O95857 204 aa13.69□□□□□ -0.22
STRADB-209ENST00000488196 S100A12P80511 92 aa13.69□□□□□ -0.22
STRADB-209ENST00000488196 ANKRD39Q53RE8 183 aa13.69□□□□□ -0.22
STRADB-209ENST00000488196 S100A7L2Q5SY68 101 aa13.69□□□□□ -0.22
STRADB-209ENST00000488196 HIST3H2BBQ8N257 126 aa13.68□□□□□ -0.22
STRADB-209ENST00000488196 LINC00308Q8TCZ7 52 aa13.68□□□□□ -0.22
STRADB-209ENST00000488196 SPRR4Q96PI1 79 aa13.68□□□□□ -0.22
STRADB-209ENST00000488196 IGLV6-57P01721 117 aa13.67□□□□□ -0.22
STRADB-209ENST00000488196 SMCR5Q8TEV8 140 aa13.67□□□□□ -0.22
STRADB-209ENST00000488196 B5MCH6 92 aa13.66□□□□□ -0.22
STRADB-209ENST00000488196 HIST1H2BLQ99880 126 aa13.65□□□□□ -0.22
STRADB-209ENST00000488196 C3orf22Q8N5N4 141 aa13.64□□□□□ -0.23
STRADB-209ENST00000488196 S100A2P29034 98 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms