RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 HSD52Q0P140 79 aa6.85□□□□□ -1.31
HLA-DMB-261ENST00000487996 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
HLA-DMB-261ENST00000487996 PPDPFQ9H3Y8 114 aa6.85□□□□□ -1.31
HLA-DMB-261ENST00000487996 PTTG1IPP53801 180 aa6.84□□□□□ -1.31
HLA-DMB-261ENST00000487996 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
HLA-DMB-261ENST00000487996 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
HLA-DMB-261ENST00000487996 DNAH17Q9UFH2 4485 aa6.84□□□□□ -1.31
HLA-DMB-261ENST00000487996 RPL18AQ02543 176 aaKnown RBP6.84□□□□□ -1.31
HLA-DMB-261ENST00000487996 ADAMTSL4-AS1Q5T5F5 129 aa6.84□□□□□ -1.31
HLA-DMB-261ENST00000487996 RPL24P83731 157 aaKnown RBP6.83□□□□□ -1.32
HLA-DMB-261ENST00000487996 DAND5Q8N907 189 aa6.83□□□□□ -1.32
HLA-DMB-261ENST00000487996 LINC00474Q9P2X8 69 aa6.83□□□□□ -1.32
HLA-DMB-261ENST00000487996 Q6ZRP5 223 aa6.82□□□□□ -1.32
HLA-DMB-261ENST00000487996 LINC00308Q8TCZ7 52 aa6.82□□□□□ -1.32
HLA-DMB-261ENST00000487996 SND1-IT1Q9HBX3 110 aa6.82□□□□□ -1.32
HLA-DMB-261ENST00000487996 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
HLA-DMB-261ENST00000487996 C16orf90A8MZG2 172 aa6.81□□□□□ -1.32
HLA-DMB-261ENST00000487996 GAGE2EQ4V326 116 aa6.81□□□□□ -1.32
HLA-DMB-261ENST00000487996 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
HLA-DMB-261ENST00000487996 GAGE2DQ9UEU5 116 aa6.81□□□□□ -1.32
HLA-DMB-261ENST00000487996 CEND1Q8N111 149 aa6.81□□□□□ -1.32
HLA-DMB-261ENST00000487996 A0A1B0GV72 72 aa6.8□□□□□ -1.32
HLA-DMB-261ENST00000487996 GHRHP01286 108 aa6.8□□□□□ -1.32
HLA-DMB-261ENST00000487996 GAGE2BQ13066 116 aa6.8□□□□□ -1.32
HLA-DMB-261ENST00000487996 MUSTN1Q8IVN3 82 aa6.8□□□□□ -1.32
HLA-DMB-261ENST00000487996 SCGB1A1P11684 91 aa6.79□□□□□ -1.32
HLA-DMB-261ENST00000487996 NPC2P61916 151 aa6.79□□□□□ -1.32
HLA-DMB-261ENST00000487996 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
HLA-DMB-261ENST00000487996 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
HLA-DMB-261ENST00000487996 NDUFC2O95298 119 aa6.79□□□□□ -1.32
HLA-DMB-261ENST00000487996 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
HLA-DMB-261ENST00000487996 A0A096LNI7 61 aa6.78□□□□□ -1.32
HLA-DMB-261ENST00000487996 KRTAP10-2P60368 255 aa6.78□□□□□ -1.32
HLA-DMB-261ENST00000487996 COL5A1-AS1Q5SY13 56 aa6.78□□□□□ -1.32
HLA-DMB-261ENST00000487996 FAT2Q9NYQ8 4349 aa6.77□□□□□ -1.33
HLA-DMB-261ENST00000487996 IGKV2-24A0A0C4DH68 120 aa6.77□□□□□ -1.33
HLA-DMB-261ENST00000487996 SOSTDC1Q6X4U4 206 aa6.77□□□□□ -1.33
HLA-DMB-261ENST00000487996 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
HLA-DMB-261ENST00000487996 A4D1N5 150 aa6.76□□□□□ -1.33
HLA-DMB-261ENST00000487996 HINT1P49773 126 aaPredicted RBP6.76□□□□□ -1.33
HLA-DMB-261ENST00000487996 LINC01620Q4KN68 170 aa6.76□□□□□ -1.33
HLA-DMB-261ENST00000487996 C9orf129Q5T035 196 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-261ENST00000487996 BVES-AS1Q5T3Y7 98 aa6.76□□□□□ -1.33
HLA-DMB-261ENST00000487996 A6NDN8 102 aa6.76□□□□□ -1.33
HLA-DMB-261ENST00000487996 FXYD2P54710 66 aa6.76□□□□□ -1.33
HLA-DMB-261ENST00000487996 HERC2O95714 4834 aa6.75□□□□□ -1.33
HLA-DMB-261ENST00000487996 TRBV10-2A0A0K0K1G8 114 aa6.75□□□□□ -1.33
HLA-DMB-261ENST00000487996 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
HLA-DMB-261ENST00000487996 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
HLA-DMB-261ENST00000487996 UBE2V1Q13404 147 aa6.75□□□□□ -1.33
HLA-DMB-261ENST00000487996 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
HLA-DMB-261ENST00000487996 DPH3Q96FX2 82 aa6.75□□□□□ -1.33
HLA-DMB-261ENST00000487996 HECTD4Q9Y4D8 3996 aa6.74□□□□□ -1.33
HLA-DMB-261ENST00000487996 TRAV13-2A0A0B4J235 113 aa6.74□□□□□ -1.33
HLA-DMB-261ENST00000487996 K7ERU9 68 aa6.74□□□□□ -1.33
HLA-DMB-261ENST00000487996 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
HLA-DMB-261ENST00000487996 SPACA4Q8TDM5 124 aa6.74□□□□□ -1.33
HLA-DMB-261ENST00000487996 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
HLA-DMB-261ENST00000487996 A0A0B4J2C4 111 aa6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 VPREB1P12018 145 aa6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 RAB37Q96AX2 223 aa6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 NHP2Q9NX24 153 aaKnown RBP6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 IGLV5-37A0A075B6J1 123 aa6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 CHTF8P0CG12 524 aa6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 BATFQ16520 125 aa6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 OCIAD2Q56VL3 154 aa6.73□□□□□ -1.33
HLA-DMB-261ENST00000487996 M0R378 163 aa6.72□□□□□ -1.33
HLA-DMB-261ENST00000487996 FAM19A5Q7Z5A7 132 aaPredicted RBP6.72□□□□□ -1.33
HLA-DMB-261ENST00000487996 A0A1B0GWB2 263 aa6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 CFC1BP0CG36 223 aa6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 CFC1P0CG37 223 aa6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 S100A7L2Q5SY68 101 aa6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 TMEM126AQ9H061 195 aa6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 PRO1854Q9UHT4 67 aa6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 DNAH11Q96DT5 4516 aa6.71□□□□□ -1.34
HLA-DMB-261ENST00000487996 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 M0QXV9 152 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 NCR3O14931 201 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 PKD1P98161 4303 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 Q6ZSA8 131 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 MRPL55Q7Z7F7 128 aaKnown RBP6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 MTURNQ8N3F0 131 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 Q8NDZ9 215 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 OR13C6PQ8NH95 151 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 C22orf24Q9Y442 160 aa6.7□□□□□ -1.34
HLA-DMB-261ENST00000487996 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
HLA-DMB-261ENST00000487996 A0A087WYN8 130 aa6.69□□□□□ -1.34
HLA-DMB-261ENST00000487996 A0A1W2PNN7 141 aa6.69□□□□□ -1.34
HLA-DMB-261ENST00000487996 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
HLA-DMB-261ENST00000487996 PRR3P79522 188 aaKnown RBP6.69□□□□□ -1.34
HLA-DMB-261ENST00000487996 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
HLA-DMB-261ENST00000487996 PLAC8Q9NZF1 115 aa6.69□□□□□ -1.34
HLA-DMB-261ENST00000487996 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
HLA-DMB-261ENST00000487996 PANO1I0J062 215 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
HLA-DMB-261ENST00000487996 RPL13AP40429 203 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms